Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0003
• Rv0669c
• Rv1096
• Rv1439c
• Rv1825
• Rv1826
• Rv1856c
• Rv1857
• Rv1858
• Rv1859
• Rv1901
• Rv1903
• Rv2146c
• Rv2238c
• Rv2239c
• Rv2387
• Rv2416c
• Rv2536
• Rv2603c
• Rv2725c
• Rv3321c

Bicluster Conditions

• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.x
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2.x
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.x
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.x
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.x
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.x
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.x
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.4
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1.x
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2.x
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3.x
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4.x
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1.x
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.3.x
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4.x
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.1
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.2
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.3
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.4
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.5
• pH4.8vspH6.8..2h.A
• pH4.8vspH6.8..4h.
• pH4.8vspH6.8..4h.A
• pH4.8vspH6.8..4h.B
• pH4.8vspH6.8..4h.C
• pH4.8vspH6.8..5h.
• pH4.8vspH6.8..5.5h.
• pH4.8vspH6.8..6h.
• pH4.8vspH6.8..7h.
• pH4.8vspH6.8..11h.
• pH5.2vspH6.8..5h.
• pH5.2vspH6.8..5.5h.
• pH5.2vspH6.8..10.5h.
• pH5.2vspH6.8..11h.
• pH5.2vspH6.8..16h.
• pH5.6vspH6.8..2h.A
• pH5.6vspH6.8..5h.
• X0.02mM.GSNOvsDMSO..6h
• X0.1mM.GSNO.DMSO..3.5h
• X0.1mM.GSNO.DMSO..6h
• X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.x
• X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.x
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
• Mtb.response.to.pH.5.5..6.replicates.
• Mtb.response.to.pH.6.5..6.replicates.
• BCG.2hr.phagosomal.profile
• BCG.24hr.phagosomal.profile
• M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
• M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
• MTB.in.Wild.type.macrophages.for.4hrs
• MTB.in.Wild.type.macrophages.for.48hrs
• MTB.in.Wild.type.macrophages...IFNg.for.4hrs
• MTB.in.Wild.type.macrophages...IFNg.for.24hrs
• MTB.in.Wild.type.macrophages...IFNg.for.48hrs
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2.y
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.6
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.7
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.4
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2.y
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4.y
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4.y
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1.y
• MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.1
• MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.2
• MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.3
• MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.4
• MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.5
• Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
• Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
• Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
• Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
• Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
• Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
• Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
• Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
• Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
• Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.3
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4
• MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.2
• MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.4
• MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3
• MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.1
• MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.2
• MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4
• MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1
• MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.4
• MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.3
• X0.2ug.mL..111891.DMSO..5.5h..1
• X0.2ug.mL..111891.DMSO..5.5h..2
• X0.2ug.mL..111891.DMSO..5.5h..3
• X0.5ug.mL..111891vsDMSO.6h
• X0.5ug.mL..111891vsDMSO.6hA
• X1ug.mL..111891vsDMSO..6h
• X2ug.mL..111891vsDMSO..6h
• X1ug.mL..111891.DMSO..12h..1
• X0.5ug.mL..111895vsDMSO..6h
• X1ug.mL..111895vsDMSO..6h
• X2ug.mL..111895vsDMSO..6h
• X2ug.mL..111895vsDMSO..6hA
• X0.5ug.mL..121940vsDMSO.6h
• X0.5ug.mL..121940vsDMSO.6hA
• X0.5ug.mL..124196vsDMSO..6h
• X0.5ug.mL..124196vsDMSO..6hA
• X5ug.mL.CapvsEtOH..6h
• X5ug.mL.CapvsEtOH..6hA
• X10ug.mL.capreomycinvsEtOH..6h
• X150uM.Deferroxaminevsctrl..6hA
• X150uM.Deferroxaminevsctrl..6hB
• X250uM.DeferroxaminevsDMSO..6h
• X5ug.mL.KCN.DMSO..6h..2
• X9ug.mLAscidideminNpvsDMSO.6h
• X10ug.mL.RoxvsEtOH..6h
• X10ug.mL.RoxvsEtOH..6hA
• X30ug.mL.RoxvsEtOH..6h
• X30ug.mL.RoxvsEtOH..6hA
• X50ug.mL.RoxvsEtOH..6h
• X2ug.mL.SMvsEtOH..6h
• X2ug.mL.SMvsEtOH..6hA
• X5ug.mLStreptomycinvsEtOH.6h
• X5ug.mLStreptomycinvsEtOH.6hA
• X5ug.mL.TetvsEtOH..6h
• X10ug.mL.TetvsEtOH..6h
• X10ug.mL.TetvsEtOH..6hA
• H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep2
• H37Rv.Ctrl.vs.5.ug.ml.garlic.extract.6hrs
• H37Rv.Ctrl.vs.10.ug.ml.garlic.extract.6hrs
• X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.y
• X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.y
• Tet_500ng_30M_01
• Tet_50ng_30M_01
• X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A
• X10ug.ml.capreomycin.vs.Ethanol..6hrs