Bicluster


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Call Stack
#TimeMemoryFunctionLocation
10.0000398256{main}( ).../index.php:0
20.0000398536require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19687193168require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20157196912include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.35247717672get_template_part( ).../page.php:28
60.35247718248locate_template( ).../general-template.php:206
70.35247718376load_template( ).../template.php:720
80.35257718688require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.35327735864the_content( ).../content-page.php:22
100.35347736112apply_filters( ).../post-template.php:256
110.35347736512WP_Hook->apply_filters( ).../plugin.php:205
120.35447742040do_shortcode( ).../class-wp-hook.php:310
130.35457748096preg_replace_callback ( ).../shortcodes.php:273
140.35457748720do_shortcode_tag( ).../shortcodes.php:273
150.35457748720bicluster_info_shortcode( ).../shortcodes.php:433
160.35467748920file_get_contents ( ).../short_codes.php:666
( ! ) Notice: Trying to get property 'bicluster' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 667
Call Stack
#TimeMemoryFunctionLocation
10.0000398256{main}( ).../index.php:0
20.0000398536require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19687193168require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20157196912include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.35247717672get_template_part( ).../page.php:28
60.35247718248locate_template( ).../general-template.php:206
70.35247718376load_template( ).../template.php:720
80.35257718688require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.35327735864the_content( ).../content-page.php:22
100.35347736112apply_filters( ).../post-template.php:256
110.35347736512WP_Hook->apply_filters( ).../plugin.php:205
120.35447742040do_shortcode( ).../class-wp-hook.php:310
130.35457748096preg_replace_callback ( ).../shortcodes.php:273
140.35457748720do_shortcode_tag( ).../shortcodes.php:273
150.35457748720bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Notice: Trying to get property 'id' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 669
Call Stack
#TimeMemoryFunctionLocation
10.0000398256{main}( ).../index.php:0
20.0000398536require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19687193168require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20157196912include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.35247717672get_template_part( ).../page.php:28
60.35247718248locate_template( ).../general-template.php:206
70.35247718376load_template( ).../template.php:720
80.35257718688require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.35327735864the_content( ).../content-page.php:22
100.35347736112apply_filters( ).../post-template.php:256
110.35347736512WP_Hook->apply_filters( ).../plugin.php:205
120.35447742040do_shortcode( ).../class-wp-hook.php:310
130.35457748096preg_replace_callback ( ).../shortcodes.php:273
140.35457748720do_shortcode_tag( ).../shortcodes.php:273
150.35457748720bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Notice: Trying to get property 'num_conditions' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 670
Call Stack
#TimeMemoryFunctionLocation
10.0000398256{main}( ).../index.php:0
20.0000398536require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19687193168require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20157196912include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.35247717672get_template_part( ).../page.php:28
60.35247718248locate_template( ).../general-template.php:206
70.35247718376load_template( ).../template.php:720
80.35257718688require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.35327735864the_content( ).../content-page.php:22
100.35347736112apply_filters( ).../post-template.php:256
110.35347736512WP_Hook->apply_filters( ).../plugin.php:205
120.35447742040do_shortcode( ).../class-wp-hook.php:310
130.35457748096preg_replace_callback ( ).../shortcodes.php:273
140.35457748720do_shortcode_tag( ).../shortcodes.php:273
150.35457748720bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Notice: Trying to get property 'num_genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 671
Call Stack
#TimeMemoryFunctionLocation
10.0000398256{main}( ).../index.php:0
20.0000398536require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19687193168require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20157196912include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.35247717672get_template_part( ).../page.php:28
60.35247718248locate_template( ).../general-template.php:206
70.35247718376load_template( ).../template.php:720
80.35257718688require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.35327735864the_content( ).../content-page.php:22
100.35347736112apply_filters( ).../post-template.php:256
110.35347736512WP_Hook->apply_filters( ).../plugin.php:205
120.35447742040do_shortcode( ).../class-wp-hook.php:310
130.35457748096preg_replace_callback ( ).../shortcodes.php:273
140.35457748720do_shortcode_tag( ).../shortcodes.php:273
150.35457748720bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Notice: Trying to get property 'residual' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 672
Call Stack
#TimeMemoryFunctionLocation
10.0000398256{main}( ).../index.php:0
20.0000398536require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19687193168require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20157196912include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.35247717672get_template_part( ).../page.php:28
60.35247718248locate_template( ).../general-template.php:206
70.35247718376load_template( ).../template.php:720
80.35257718688require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.35327735864the_content( ).../content-page.php:22
100.35347736112apply_filters( ).../post-template.php:256
110.35347736512WP_Hook->apply_filters( ).../plugin.php:205
120.35447742040do_shortcode( ).../class-wp-hook.php:310
130.35457748096preg_replace_callback ( ).../shortcodes.php:273
140.35457748720do_shortcode_tag( ).../shortcodes.php:273
150.35457748720bicluster_info_shortcode( ).../shortcodes.php:433
ID:
# Conditions:
# Genes:
Residual:

Bicluster Motifs

Bicluster Genes

  • Rv0540
  • Rv1027c
  • Rv1028c
  • Rv1030
  • Rv1031
  • Rv1032c
  • Rv1087
  • Rv1572c
  • Rv1918c
  • Rv2716
  • Rv2767c
  • Rv3227
  • Rv3254
  • Rv3488
  • Rv3532
  • Rv3834c

Bicluster Conditions

  • Strain.CDC1551..replicate.3
  • Strain.1006...replicate.3
  • Strain.1254...replicate.4
  • Strain.1843...replicate.3
  • Strain.9700665..replicate.1
  • Strain.9802501..replicate1
  • Strain.9802501..replicate.2
  • Strain.9802501..replicate.3
  • Strain.9802826..replicate.4
  • Strain.M3061a..replicate.1
  • H37Rv.Vs.M.bovis.rep1
  • H37Rv.Vs.M.bovis.rep3
  • MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2
  • MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.3
  • MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5
  • MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.6
  • H37Rv.0.2..Oxygen..2h..1
  • H37Rv.0.2..Oxygen..2h..2
  • H37Rv.0.2..Oxygen..2h..4
  • H37Rv.0.2..Oxygen..2h..6
  • H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1
  • H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2
  • H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3
  • H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4
  • H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5
  • H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.6
  • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
  • H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
  • H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
  • Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
  • Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
  • Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
  • Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.1
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2
  • Whole.Lung.Surfactant.2hrs.rep.2
  • Whole.Lung.Surfactant.2hrs.rep.3
  • Whole.Lung.Surfactant.30min.rep.2
  • Extracted.Lung.Surfactant.30min.rep.2
  • Extracted.Lung.Surfactant.30min.rep.3
  • Extracted.Lung.Surfactant.30min.rep.4
  • Purified.Surfactant.Lipids.30min.rep.1
  • Purified.Human.SP.A.Coated.2hrs.rep1
  • Purified.Human.SP.A.Coated.2hrs.rep2
  • Purified.Human.SP.A.Uncoated.2hrs.rep1
  • Purified.Human.SP.A.Uncoated.2hrs.rep3
  • Purified.Human.SP.A.Uncoated.2hrs.rep4
  • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.2
  • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3
  • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.2
  • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.3
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.1
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.2
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.1
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.2
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3
  • Mtb.Erdman.strain.20.ppm.CO.rep.1
  • Mtb.Erdman.strain.20.ppm.CO.rep.2
  • Mtb.Erdman.strain.200.ppm.CO.rep.1
  • Mtb.Erdman.strain.2000.ppm.CO.rep.1
  • Mtb.Erdman.strain.2000.ppm.CO.rep.2
  • hip.mutant.KL2849..biological.rep1
  • hip.mutant.HTS1105..biological.rep1
  • hip.mutant.HT1116..biological.rep1
  • hip.mutant.HT1116..biological.rep2
  • hip.mutant.HT1117..biological.rep1
  • hip.mutant.HT1117..biological.rep2
  • hip.mutant.HT1120..biological.rep1
  • hip.mutant.HT1120..biological.rep2
  • hip.mutant.HT1134..biological.rep1
  • hip.mutant.HT1134..biological.rep2
  • hip.mutant.HT1137..biological.rep1
  • hip.mutant.HT1137..biological.rep2