ID: 552f053eb744335b89d43d34
# Conditions: 286
# Genes: 17
Residual: 0.48067042755956
# Conditions: 286
# Genes: 17
Residual: 0.48067042755956
Bicluster Motifs
Bicluster Genes
- Rv0365c
- Rv0381c
- Rv0421c
- Rv0422c
- Rv0557
- Rv0598c
- Rv1370c
- Rv1495
- Rv1679
- Rv2219
- Rv2362c
- Rv2543
- Rv2553c
- Rv2554c
- Rv2593c
- Rv2696c
- Rv3677c
Bicluster Conditions
- H37Rv.0.05..SDS.exposure.for.1h.rep.1
- H37Rv.0.05..SDS.exposure.for.1h.rep.2
- H37Rv.0.05..SDS.exposure.for.1h.rep.3
- H37Rv.0.05..SDS.exposure.for.1h.rep.4
- H37Rv.0.05..SDS.exposure.for.1h.rep.5
- H37Rv.0.05..SDS.exposure.for.1h.rep.6
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.x
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2.x
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.x
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.x
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.x
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.4
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3.x
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.x
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.2
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.3
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.4
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.1
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.2
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.3
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.4
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.3
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.2
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.4
- MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2.x
- MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1.x
- MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.3.x
- MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4.x
- H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
- H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
- CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.3
- CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.4
- H37Rv.vs..H37Rv.SDS.treated.rep.4
- H37Rv.vs..H37Rv.SDS.treated.rep.6
- High.iron.wt.vs.low.iron.wt.1a
- High.iron.wt.vs.low.iron.wt.2a
- High.iron.wt.vs.low.iron.wt.3b
- pH4.8vspH6.8..2h.B
- pH4.8vspH6.8..5h.
- pH4.8vspH6.8..5.5h.
- pH4.8vspH6.8..7h.
- pH5.2vspH6.8..2h.
- pH5.2vspH6.8..5h.
- pH5.2vspH6.8..5.5h.
- pH5.2vspH6.8..11h.
- pH5.2vspH6.8..16h.
- pH5.6vspH6.8..4h.
- pH5.6vspH6.8..5h.
- pH5.6vspH6.8..11h.
- pH5.6vspH6.8..16h.
- X0.02mM.GSNOvsDMSO..6h
- X4mM.H2O2vsctrl..1h.
- X4mM.H2O2.ctrl..2h...2
- H2O2.4mM.vs.ctrl.8h.1
- H37Rv.diamide.1h.rep.1
- H37Rv.diamide.1h.rep.2
- H37Rv.diamide.1h.rep.4
- H37Rv.diamide.1h.rep.5
- H37Rv.diamide.1h.rep.6
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.1
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.3
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.5
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.6
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
- SDS_3h_01
- SDS_60min_01
- Starvation_1254_12h_01
- Starvation_1254_12h_04
- Starvation_1254_24h_01
- Starvation_1254_24h_02
- Starvation_1254_24h_03
- Starvation_1254_24h_05
- Starvation_1254_3d_01
- Starvation_1254_3d_02
- Starvation_1254_3d_03
- Starvation_1254_3d_04
- Starvation_1254_6h_03
- Starvation_1254_6h_05
- Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
- Mtb.response.to.pH.5.5..6.replicates.
- BCG.24hr.phagosomal.profile
- M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
- M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
- MTB.in.Wild.type.macrophages.for.4hrs
- MTB.in.Wild.type.macrophages.for.24hrs
- MTB.in.Wild.type.macrophages.for.48hrs
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.y
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2.y
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.y
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.y
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.y
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.y
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6.y
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7.y
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.3
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.5
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.6
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.y
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.y
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.y
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.6
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.7
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.1
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.2
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.3
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.4
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.1
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.3
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1.y
- MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2.y
- MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3.y
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.1
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.3
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.5
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.6
- MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.1
- MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.3.y
- MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1.y
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.5
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.1
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.2
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.3
- MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.1
- MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.3
- MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.5
- MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.6
- MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.1
- MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.2
- MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.3
- MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.4
- MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.5
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.5
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.6
- Russell_Lab_Spotted_Oligos_1.2..14.day.resting.macrophage.infection.2hr..rep.2..Russell_Lab_Spotted_Oligos_1.2..
- Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
- Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
- Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
- Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
- Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
- Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
- Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
- Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
- Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
- WT_140mM_NaCl_Rep1
- WT_140mM_NaCl_Rep2
- WT_140mM_NaCl_Rep3
- A00470_Q2_t60_diamide
- A00470_Q3_t90_diamide
- A00436_Q3_t90_diamide
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.1
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.4
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.4
- MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.1
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.2
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.4
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.3
- MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.1
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.1
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.3
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.3
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.3
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.2
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.4
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.3
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.4
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.4
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.1
- X20ug.mL.Prcp.6776.DMSO..6h..1
- X20ug.mL.Procept6776vsDMSO..6h
- X30ug.mLProcept6776vsDMSO.6h
- X30ug.mLProcept6776vsDMSO.6hA
- X5ug.mLProcept.6778vsDMSO.6h
- X5ug.mLProcept.6778vsDMSO.6hA
- X20ug.mL.Prcp.6778.DMSO..6h..1
- X20ug.mL.Prcp.6778.DMSO..6h..2
- X40ug.mLProcept6778vsDMSO.6h
- X40ug.mLProcept6778vsDMSO.6hA
- X10ug.mL.PA.1vsDMSO..6h
- X10ug.mL.PA.21vsDMSO..6h
- X0.2ug.mL.PA824.DMSO..6h..1
- X0.2ug.mL.PA824.DMSO..6h..2
- X0.4ug.mL.PA824.DMSO..6h..1
- X0.4ug.mL.PA824.DMSO..6h..2
- X0.4ug.mL.PA824.DMSO..6h..3
- X0.4ug.mL.PA824.DMSO..6h..4
- X2ug.mL.PA824.DMSO..6h..1
- X2ug.mL.PA824.DMSO..6h..2
- X5ug.mL.AmivsEtOH..6hA
- X10ug.mL.Amikacin.EtOH..6h
- X12.5ug.mL.AntimycinvsDMSO..6h
- X25ug.mL.AntimycinvsDMSO..6h
- X50ug.mLAntimycinAvsDMSO..6h
- X50ug.mLAntimycinAvsDMSO..6hA
- X50ug.mLAntimycinAvsDMSO..6hB
- X10ug.mL.CapvsEtOH..6h
- X5ug.mL.KCN.DMSO..6h..2
- X10ug.mLMethoxatinvsDMSO.6h
- X2mMb.mercaptoethanolvsDMSO.6h
- Rif.5ug.mL.vsDMSO.2.5h
- Rif.5ug.mL.vsDMSO.2.5hA
- X0.1ug.mL.RifpvsEtOH..6hA
- X50ug.mL.RoxvsEtOH..6h
- X5ug.mLStreptomycinvsEtOH.6h
- X5ug.mLStreptomycinvsEtOH.6hA
- X5ug.mL.TetvsEtOH..6h
- X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.y
- X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.y
- X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1
- X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.1
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.x
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4
- X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.x
- X2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
- Tet_100uM_30M_01
- Tet_20uM_30M_01
- Tet_50ng_30M_01
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.y
- X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.y
- X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A
- X10ug.ml.capreomycin.vs.Ethanol..6hrs
- X5ug.ml.Streptomycin.vs.Ethanol.6hrs
- MTB.at.T0..biological.rep4
- MTB.at.T180..biological.rep3
- MTB.at.T180..biological.rep4
- MTB.at.T360..biological.rep1
- MTB.at.T360..biological.rep2
- MTB.at.T360..biological.rep3
- MTB.at.T360..biological.rep4