ID: 552f053eb744335b89d43d6b
# Conditions: 292
# Genes: 22
Residual: 0.47213011927395
# Conditions: 292
# Genes: 22
Residual: 0.47213011927395
Bicluster Motifs
Bicluster Genes
- Rv0129c
- Rv0655
- Rv0883c
- Rv1157c
- Rv1158c
- Rv1435c
- Rv1697
- Rv1698
- Rv2147c
- Rv2150c
- Rv2155c
- Rv2927c
- Rv3005c
- Rv3246c
- Rv3258c
- Rv3267
- Rv3310
- Rv3414c
- Rv3587c
- Rv3689
- Rv3717
- Rv3841
Bicluster Conditions
- H37Rv.0.05..SDS.exposure.for.1h.rep.2
- H37Rv.0.05..SDS.exposure.for.1h.rep.3
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.x
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2.x
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.x
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.x
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.x
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.x
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.1
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.4
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.x
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.x
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3.x
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.x
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.1
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.2
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.3
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.4
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.2
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.3
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.3
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.4
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.4
- MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4.x
- MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1.x
- H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
- H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3
- CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.2
- CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.4
- H37Rv.vs..H37Rv.SDS.treated.rep.1
- H37Rv.vs..H37Rv.SDS.treated.rep.3
- High.iron.wt.vs.low.iron.wt.1a
- High.iron.wt.vs.low.iron.wt.1b
- High.iron.wt.vs.low.iron.wt.2a
- High.iron.wt.vs.low.iron.wt.2b
- High.iron.wt.vs.low.iron.wt.3a
- pH4.8vspH6.8..2h.
- pH4.8vspH6.8..2h.A
- pH4.8vspH6.8..2h.B
- pH4.8vspH6.8..4h.
- pH4.8vspH6.8..4h.A
- pH4.8vspH6.8..4h.C
- pH4.8vspH6.8..5h.
- pH4.8vspH6.8..5.5h.
- pH4.8vspH6.8..6h.
- pH4.8vspH6.8..7h.
- pH4.8vspH6.8..11h.
- pH5.2vspH6.8..2h.
- pH5.2vspH6.8..5h.
- pH5.2vspH6.8..5.5h.
- pH5.2vspH6.8..10.5h.
- pH5.2vspH6.8..11h.
- pH5.2vspH6.8..16h.
- pH5.6vspH6.8..2h.
- pH5.6vspH6.8..2h.A
- pH5.6vspH6.8..4h.
- pH5.6vspH6.8..4h.B
- pH5.6vspH6.8..5h.
- pH5.6vspH6.8..11h.
- pH5.6vspH6.8..16h.
- X0.02mM.GSNOvsDMSO..6h
- X0.1mM.GSNO.DMSO..3.5h
- X0.1mM.GSNOvsDMSO..4h
- X0.1mM.GSNO.DMSO..6h
- X4mM.H2O2vsctrl..1h.
- X4mM.H2O2vsctrl..2h.
- X4mM.H2O2vsctrl..2h.A
- X4mM.H2O2.ctrl..2h...1
- X4mM.H2O2.ctrl..2h...2
- X4mM.H2O2.ctrl..4h...1
- X4mM.H2O2.ctrl..4h...2
- X4mM.H2O2vsctrl..4h.
- X4mM.H2O2vsctrl..4h.A
- H2O2.4mM.vs.ctrl.8h.1
- H37Rv.diamide.1h.rep.1
- H37Rv.diamide.1h.rep.2
- H37Rv.diamide.1h.rep.3
- H37Rv.diamide.1h.rep.4
- H37Rv.diamide.1h.rep.5
- H37Rv.diamide.1h.rep.6
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.3
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.5
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6
- X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.x
- X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.x
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
- CHP_25uM_1h_01
- CHP_25uM_24h_01
- CHP_25uM_2h_01
- MTB1254_SDS_90MIN_01
- MTB1254_SDS_90MIN_03
- Starvation_1254_12h_03
- Starvation_1254_24h_03
- Starvation_1254_24h_05
- Starvation_1254_24h_06
- Starvation_1254_24h_07
- Starvation_1254_24h_08
- Starvation_1254_6h_01
- Starvation_1254_6h_02
- Starvation_1254_6h_03
- Starvation_1254_6h_04
- Starvation_1254_6h_06
- Starvation_1254_6h_07
- Starvation_1254_6h_08
- Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
- Mtb.response.to.pH.5.5..6.replicates.
- BCG.24hr.phagosomal.profile
- M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
- MTB.in.Wild.type.macrophages...IFNg.for.24hrs
- MTB.in.Wild.type.macrophages...IFNg.for.48hrs
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.y
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2.y
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.y
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.y
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.y
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.y
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7.y
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.1
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.3
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.5
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.6
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.6
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.7
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.1
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.3
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.5
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.6
- MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3.y
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.1
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2.y
- MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.3.y
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.1
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.1
- MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.1
- MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.3
- MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.6
- MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.1
- MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.2
- MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.3
- MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.4
- MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.5
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.1
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.2
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.3
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.5
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.6
- Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
- Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
- Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
- Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
- Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
- Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
- Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
- WT_140mM_NaCl_Rep2
- WT_140mM_NaCl_Rep4
- A00470_Q3_t90_diamide
- A00437_Q2_t60_diamide
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4
- MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.1
- MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.3
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.4
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.4
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3
- MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.4
- MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.3
- MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.5
- MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.2
- MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.1
- MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.3
- MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.1
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.1
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.2
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.3
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.2
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.4
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.2
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.4
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.3
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.3
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.4
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.1
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.3
- X20ug.mL.Prcp.6776.DMSO..6h..1
- X30ug.mLProcept6776vsDMSO.6h
- X30ug.mLProcept6776vsDMSO.6hA
- X20ug.mL.Prcp.6778.DMSO..6h..1
- X20ug.mL.Prcp.6778.DMSO..6h..2
- X20ug.mLProcept6778vsDMSO.6hA
- X20ug.mLProcept6778vsDMSO.6hB
- X10ug.mL.PA.1vsDMSO..6h
- X10ug.mL.PA.1vsDMSO..6hA
- X10ug.mL.PA.21vsDMSO..6h
- X0.2ug.mL.PA824.DMSO..6h..1
- X0.2ug.mL.PA824.DMSO..6h..2
- X0.4ug.mL.PA824.DMSO..6h..1
- X0.4ug.mL.PA824.DMSO..6h..2
- X0.4ug.mL.PA824.DMSO..6h..4
- X2ug.mL.PA824.DMSO..6h..1
- X25ug.mL.AntimycinvsDMSO..6h
- X50ug.mLAntimycinAvsDMSO..6h
- X50ug.mLAntimycinAvsDMSO..6hA
- X5ug.mL.CapvsEtOH..6h
- X5ug.mL.CapvsEtOH..6hA
- X1mM.DTNBvsDMSO..6h
- X2mM.DTNBvsDMSO
- X10ug.mL.methoxatinvsDMSO..6h.A
- X20ug.mL.methoxatinvsDMSO..6h
- X2mMb.mercaptoethanolvsDMSO.6h
- X0.2ug.mL.RifvsDMSO..6hA
- Rif.0.5ug.mL.vsDMSO.2.5h
- Rif.0.5ug.mL.vsDMSO.2.5hA
- Rif.5ug.mL.vsDMSO.2.5h
- Rif.5ug.mL.vsDMSO.2.5hA
- X0.1ug.mL.RifpvsEtOH..6h
- X0.1ug.mL.RifpvsEtOH..6hA
- X10ug.mL.RoxvsEtOH..6hA
- X50ug.mL.RoxvsEtOH..6h
- X2ug.mL.SMvsEtOH..6h
- X2ug.mL.SMvsEtOH..6hA
- X5ug.mLStreptomycinvsEtOH.6h
- X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4
- Tet_100uM_30M_01
- Tet_20uM_30M_01
- Tet_500ng_30M_01
- Tet_50ng_30M_01
- Tet_5ug_30M_01
- X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A
- X5ug.ml.Rifampicin.vs.DMSO.2.5hrs
- MTB.at.T0..biological.rep1
- MTB.at.T30..biological.rep1
- MTB.at.T30..biological.rep2
- MTB.at.T30..biological.rep3
- MTB.at.T60..biological.rep1
- MTB.at.T60..biological.rep2
- MTB.at.T180..biological.rep2
- MTB.at.T360..biological.rep2
- MTB.at.T360..biological.rep3
- MTB.at.T360..biological.rep4