ID: 552f13cfb744335b89d49df1
# Conditions: 294
# Genes: 28
Residual: 0.54916791079262
# Conditions: 294
# Genes: 28
Residual: 0.54916791079262
Bicluster Motifs
Bicluster Genes
- Rv0012
- Rv0019c
- Rv0046c
- Rv0135c
- Rv0154c
- Rv0419
- Rv0906
- Rv1013
- Rv1304
- Rv1326c
- Rv1327c
- Rv1420
- Rv1592c
- Rv1594
- Rv2234
- Rv2280
- Rv2454c
- Rv2455c
- Rv2486
- Rv2496c
- Rv3075c
- Rv3205c
- Rv3400
- Rv3801c
- Rv3816c
- Rv3843c
- Rv3863
- Rv3865
Bicluster Conditions
- MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2
- H37Rv.hypoxia.2hr.rep.1
- NRP.Day6..1
- NRP.Day6..3
- NRP.Day8..1
- NRP.Day8..2
- NRP.Day8..3
- NRP.Day10..1
- NRP.Day10..2
- NRP.Day10..3
- NRP.Day12..1
- NRP.Day12..2
- NRP.Day12..3
- NRP.Day14..2
- NRP.Day14..3
- NRP.Day14..4
- NRP.Day14..5
- NRP.Day14..8
- NRP.Day14..9
- NRP.Day20..1
- pH4.8vspH6.8..2h.A
- pH4.8vspH6.8..5h.
- pH4.8vspH6.8..5.5h.
- pH4.8vspH6.8..6h.
- pH4.8vspH6.8..7h.
- pH5.2vspH6.8..5h.
- pH5.2vspH6.8..10.5h.
- pH5.2vspH6.8..16h.
- pH5.6vspH6.8..2h.A
- pH5.6vspH6.8..4h.
- pH5.6vspH6.8..4h.B
- pH5.6vspH6.8..5h.
- X0.1ug.mL.Mtmvsctrl..0.33h..x
- X0.1ug.mL.Mtmvsctrl..0.75h..x
- X0.1ug.mL.Mtmvsctrl..1.5h..x
- X0.2ug.mL.Mtmvsctrl..0.33h..x
- X0.2ug.mL.Mtmvsctrl..0.75h..x
- X0.2ug.mL.Mtmvsctrl..1.5h..x
- X0.2ug.mL.Mtmvsctrl..2h..x
- X0.2ug.mL.Mtmvsctrl..2h.B.x
- X0.2ug.mL.Mtmvsctrl..4h.A.x
- X0.2ug.mL.Mtmvsctrl..4h.B.x
- X0.2ug.mL.Mtmvsctrl..6h..x
- Mtm.0.2ug.mL.vs.ctrl.12h.1.x
- H37Rv.hypoxia.4hr.rep.1
- H37Rv.hypoxia.4hr.rep.2
- H37Rv.hypoxia.4hr.rep.4
- H37Rv.hypoxia.4hr.rep.5
- H37Rv.hypoxia.4hr.rep.6
- H37Rv.hypoxia.8hr.rep.1
- H37Rv.hypoxia.12hr.rep.1
- H37Rv.hypoxia.12hr.rep.2
- H37Rv.hypoxia.1.day.rep.3
- H37Rv.hypoxia.1.day.rep.5
- H37Rv.hypoxia.1.day.rep.9
- H37Rv.hypoxia.4.day.rep.1
- H37Rv.hypoxia.4.day.rep.5
- H37Rv.hypoxia.4.day.rep.6
- H37Rv.hypoxia.7.day.rep.2
- H37Rv.hypoxia.7.day.rep.6
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
- Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
- H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
- Mtb.Erdman.strain.20.ppm.CO.rep.2
- Mtb.Erdman.strain.200.ppm.CO.rep.1
- Mtb.response.to.pH.5.5..6.replicates.
- BCG.2hr.phagosomal.profile
- M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
- MTB.in.Wild.type.macrophages.for.24hrs
- MTB.in.Wild.type.macrophages.for.48hrs
- MTB.in.Wild.type.macrophages...IFNg.for.4hrs
- Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
- Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
- Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
- Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
- Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
- Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
- Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
- Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
- SG2.B0_N02A09c3
- SG2.D0_N02A01c5
- SG6.G0_N5A02cy.5
- SG6.H0_N5A03cy.5
- SG6_A0_N7A10cy.3
- SG6_B0_N7A10cy.5
- SG7.CT0_N11A03cy.5
- SG8.C.Day.0.pre_N27A07cy.3
- SG8.D.Day.0.post_N27A11cy.3
- SG.ISB.3.0A_N30A01cy.3
- SG.ISB.3.0B_N30A01cy.5
- SG8.D.Day.1_N27A12cy.3
- SG7.DT1_N11A08cy.5
- SG7.CT1_N11A07cy.5
- SG7.BT1_N11A06cy.5
- SG6.C1_N5A04cy.5
- SG2.D1_N02A02c5
- SG2.B1_N02A10c3
- SG2.A1_N02A02c3
- SG2.D2_N02A03c5
- SG2.A3_N02A04c3
- SG2.B3_N02A12c3
- SG2.D3_N02A04c5
- SG2.A5_N02A05c3
- SG2.B5_N02A09c5
- SG2.D5_N02A05c5
- SG2.D7_N02A06c5
- SG2.B7_N02A10c5
- SG2.A7_N02A06c3
- SG6_A7_N7A12cy.3
- SG7.T7B_N11A09cy.5
- SG8.A.Day.7_N37A11cy.3
- SG.ISB.3.7D_N30A04cy.3
- SG12.B0_N32A09cy.3
- SG12.A1_N32A02cy.3
- SG12.A4_N32A04cy.3
- SG12.A6_N32A05cy.3
- SG12.B8_N32A02cy.5
- SG2.B8_N02A11c5
- SG6D.T8_N11A03cy.3
- SG6.D8_N5A09cy.5
- SG6.C8_N5A08cy.5
- SG6.B8_N5A07cy.5
- SG6.A8_N5A06cy.5
- SG.ISB.3.8A_N30A04cy.5
- SG2.A9_N02A08c3
- SG2.D9_N02A08c5
- SG6.D11_N8A09cy.5
- SG6.B11_N5A11cy.5
- SG7.T12B_N11A10cy.3
- SG12.C120_N32A12cy.5
- SG.ISB.3.12B_N30A07cy.3
- SG.ISB.3.12C_N30A07cy.5
- SG.ISB.3.12D_N30A08cy.3
- SG6.A14_N8A10cy.5
- SG6.C14_N8A12cy.5
- SG6D.T14_N11A04cy.3
- WT_140mM_NaCl_Rep1
- WT_140mM_NaCl_Rep2
- WT_140mM_NaCl_Rep3
- WT_140mM_NaCl_Rep4
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.2
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.2
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.3
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.4
- MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.4
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.1
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.2
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.3
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.4
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.2
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.2
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4
- MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.3
- MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.4
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.3
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.4
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4
- MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.1
- MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.2
- MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.5
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.1
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.4
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.5
- MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.1
- MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.2
- MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.3
- MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.1
- MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.4
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.1
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.4
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.2
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.3
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.4
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.2
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.3
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.4
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.2
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.3
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.4
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.1
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.2
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.2
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.4
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.1
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.2
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.2
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.3
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.2
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.4
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.2
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.4
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.5
- X20ug.mL.Prcp.6776.DMSO..6h..1
- X20ug.mL.Procept.6776vsDMSO..6h
- X30ug.mLProcept6776vsDMSO.6hA
- X5ug.mLProcept.6778vsDMSO.6hA
- X20ug.mL.Prcp.6778.DMSO..6h..1
- X20ug.mLProcept6778vsDMSO.6h
- X20ug.mLProcept6778vsDMSO.6hA
- X20ug.mLProcept6778vsDMSO.6hB
- X40ug.mLProcept6778vsDMSO.6hA
- X0.4ug.mL.PA824.DMSO..6h..1
- X0.4ug.mL.PA824.DMSO..6h..4
- X0.1ug.mL.Mtmvsctrl..0.33h..y
- X0.1ug.mL.Mtmvsctrl..0.75h..y
- X0.2ug.mL.Mtmvsctrl..0.33h..y
- X0.2ug.mL.Mtmvsctrl..0.75h..y
- X0.2ug.mL.Mtmvsctrl..1.5h..y
- X0.2ug.mL.Mtmvsctrl..2h..y
- X0.2ug.mL.Mtmvsctrl..2h.B.y
- X0.2ug.mL.Mtmvsctrl..4h.B.y
- X0.2ug.mL.Mtmvsctrl..6h..y
- Mtm.0.2ug.mL.vs.ctrl.8h.1.y
- Mtm.0.2ug.mL.vs.ctrl.8h.2.y
- X25ug.mL.AntimycinvsDMSO..6h
- X50ug.mLAntimycinAvsDMSO..6hB
- X5ug.mL.CapvsEtOH..6h
- X10ug.mL.capreomycinvsEtOH..6h
- X1mM.DTNBvsDMSO..6h
- X2mM.DTNBvsDMSO
- X5ug.mL.KCN.DMSO..6h..2
- X2mMb.mercaptoethanolvsDMSO.6h
- X10ug.mL.Nvb.DMSO..6h..3
- X10ug.mL.OfloxvsDMSO..6h
- X10ug.mL.OfloxvsDMSO..6hA
- X10ug.mL.RoxvsEtOH..6hA
- X50ug.mL.VerapamilvsDMSO..6h
- X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.y
- X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.x
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4
- Tet_100uM_30M_01
- Tet_20uM_30M_01
- Tet_500ng_30M_01
- Tet_50ng_30M_01
- Tet_5ug_30M_01
- X10ug.ml.capreomycin.vs.Ethanol..6hrs
- X5ug.ml.Streptomycin.vs.Ethanol.6hrs
- MTB.at.T0..biological.rep1
- MTB.at.T0..biological.rep2
- MTB.at.T0..biological.rep3
- MTB.at.T0..biological.rep4
- MTB.at.T30..biological.rep1
- MTB.at.T30..biological.rep2
- MTB.at.T30..biological.rep3
- MTB.at.T60..biological.rep1
- MTB.at.T180..biological.rep1
- MTB.at.T360..biological.rep2
- MTB.at.T360..biological.rep3
- MTB.at.T360..biological.rep4