ID: 552f13cfb744335b89d49f02
# Conditions: 293
# Genes: 19
Residual: 0.54255966202007
# Conditions: 293
# Genes: 19
Residual: 0.54255966202007
Bicluster Motifs
Bicluster Genes
- Rv0506
- Rv1137c
- Rv1366
- Rv1521
- Rv1522c
- Rv1607
- Rv1624c
- Rv1979c
- Rv2290
- Rv2292c
- Rv2339
- Rv2939
- Rv3190c
- Rv3317
- Rv3404c
- Rv3523
- Rv3635
- Rv3661
- Rv3687c
Bicluster Conditions
- MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1
- MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.3
- H37Rv.hypoxia.2hr.rep.4
- H37Rv.hypoxia.2hr.rep.5
- H37Rv.hypoxia.2hr.rep.6
- NRP.Day6..1
- NRP.Day6..2
- NRP.Day8..3
- NRP.Day10..2
- NRP.Day12..1
- NRP.Day12..2
- NRP.Day12..3
- NRP.Day14..3
- NRP.Day14..5
- NRP.Day14..9
- NRP.Day30..1
- pH4.8vspH6.8..2h.
- pH4.8vspH6.8..2h.A
- pH4.8vspH6.8..2h.B
- pH4.8vspH6.8..7h.
- pH5.2vspH6.8..2h.
- pH5.2vspH6.8..16h.
- pH5.6vspH6.8..2h.A
- pH5.6vspH6.8..4h.B
- pH5.6vspH6.8..5h.
- pH5.6vspH6.8..11h.
- X0.1ug.mL.Mtmvsctrl..1.5h..x
- X0.2ug.mL.Mtmvsctrl..1.5h..x
- X0.2ug.mL.Mtmvsctrl..2h..x
- X0.2ug.mL.Mtmvsctrl..2h.B.x
- X0.2ug.mL.Mtmvsctrl..4h..x
- X0.2ug.mL.Mtmvsctrl..4h.B.x
- X0.2ug.mL.Mtm.ctrl..4h...1.x
- X0.2ug.mL.Mtm.ctrl..4h...2.x
- H37Rv.hypoxia.4hr.rep.1
- H37Rv.hypoxia.4hr.rep.2
- H37Rv.hypoxia.4hr.rep.4
- H37Rv.hypoxia.4hr.rep.5
- H37Rv.hypoxia.4hr.rep.6
- H37Rv.hypoxia.8hr.rep.2
- H37Rv.hypoxia.8hr.rep.3
- H37Rv.hypoxia.12hr.rep.2
- H37Rv.hypoxia.1.day.rep.2
- H37Rv.hypoxia.1.day.rep.4
- H37Rv.hypoxia.1.day.rep.5
- H37Rv.hypoxia.1.day.rep.6
- H37Rv.hypoxia.1.day.rep.10
- H37Rv.hypoxia.4.day.rep.1
- H37Rv.hypoxia.4.day.rep.2
- H37Rv.hypoxia.4.day.rep.6
- H37Rv.hypoxia.4.day.rep.7
- H37Rv.hypoxia.7.day.rep.4
- H37Rv.hypoxia.7.day.rep.6
- H37Rv.hypoxia.7.day.rep.7
- X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.x
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
- Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
- Mtb.Erdman.strain.20.ppm.CO.rep.1
- Mtb.Erdman.strain.20.ppm.CO.rep.2
- Mtb.Erdman.strain.200.ppm.CO.rep.1
- Mtb.Erdman.strain.2000.ppm.CO.rep.1
- Mtb.response.to.pH.6.5..6.replicates.
- BCG.24hr.phagosomal.profile
- M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
- MTB.in.Wild.type.macrophages.for.4hrs
- MTB.in.Wild.type.macrophages.for.24hrs
- MTB.in.Wild.type.macrophages.for.48hrs
- MTB.in.Wild.type.macrophages...IFNg.for.4hrs
- MTB.in.Wild.type.macrophages...IFNg.for.24hrs
- MTB.in.Wild.type.macrophages...IFNg.for.48hrs
- Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
- Russell_Lab_Spotted_Oligos_1.2..14.day.resting.macrophage.infection.2hr..rep.2..Russell_Lab_Spotted_Oligos_1.2..
- Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
- Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
- Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
- Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
- Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
- SG2.B0_N02A09c3
- SG6.G0_N5A02cy.5
- SG6_A0_N7A10cy.3
- SG6_B0_N7A10cy.5
- SG7.AT0_N11A01cy.5
- SG7.BT0_N11A02cy.5
- SG7.DT0_N11A04cy.5
- SG8.A.Day.0.pre_fix_N37A04cy.5
- SG8.B.Day.0.pre_N37A12cy.3
- SG8.C.Day.0.post_N27A08cy.3
- SG8.C.Day.0.pre_N27A07cy.3
- SG8.D.Day.0.pre_N27A10cy.3
- SG8.C.Day.0.post_N37A10cy.5
- SG8.D.Day.0.post_N27A11cy.3
- SG.ISB.3.0A_N30A01cy.3
- SG.ISB.3.0B_N30A01cy.5
- SG.ISB.3.0C_N30A02cy.3
- SG7.DT1_N11A08cy.5
- SG7.BT1_N11A06cy.5
- SG2.D1_N02A02c5
- SG2.B1_N02A10c3
- SG2.A1_N02A02c3
- SG8.C.Day.2_N37A12cy.5
- SG2.A2_N02A03c3
- SG2.B2_N02A11c3
- SG2.D2_N02A03c5
- SG8.B.Day.3_N37A07cy.5
- SG2.A3_N02A04c3
- SG2.B3_N02A12c3
- SG2.D3_N02A04c5
- SG8.A.Day.5_N37A10cy.3
- SG8.B.Day.5_N37A08cy.5
- SG2.B5_N02A09c5
- SG2.D5_N02A05c5
- SG2.D7_N02A06c5
- SG2.B7_N02A10c5
- SG2.A7_N02A06c3
- SG6D.T7_N11A02cy.3
- SG6_B7_N7A12cy.5
- SG6_A7_N7A12cy.3
- SG7.T7B_N11A09cy.5
- SG7.T7C_N11A10cy.5
- SG7.T7D_N11A11cy.5
- SG.ISB.3.7B_N30A03cy.3
- SG.ISB.3.7C_N30A03cy.5
- SG12.C0_N32A05cy.5
- SG12.B0_N32A09cy.3
- SG12.A0_N32A01cy.3
- SG12.B2_N32A11cy.3
- SG12.C4_N32A08cy.5
- SG12.A6_N32A05cy.3
- SG12.B6_N32A01cy.5
- SG12.C6_N32A09cy.5
- SG12.A8_N32A06cy.3
- SG12.B8_N32A02cy.5
- SG12.C8_N32A10cy.5
- SG12.C24_N32A11cy.5
- SG12.B24_N32A03cy.5
- SG12.A24_N32A07cy.3
- SG2.D8_N02A07c5
- SG6.C8_N5A08cy.5
- SG6.A8_N5A06cy.5
- SG7.T8C_N11A07cy.3
- SG7.T8D_N11A08cy.3
- SG.ISB.3.8A_N30A04cy.5
- SG6.C11_N5A12cy.5
- SG7.T12D_N11A12cy.3
- SG7.T12C_N11A11cy.3
- SG7.T12A_N11A09cy.3
- SG12.B120_N32A04cy.5
- SG12.A120_N32A08cy.3
- SG.ISB.3.12A_N30A06cy.5
- SG.ISB.3.12B_N30A07cy.3
- SG.ISB.3.12C_N30A07cy.5
- SG.ISB.3.12D_N30A08cy.3
- SG6.C14_N8A12cy.5
- SG6D.T14_N11A04cy.3
- WT_140mM_NaCl_Rep1
- WT_140mM_NaCl_Rep2
- WT_140mM_NaCl_Rep4
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.1
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.1
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.2
- MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.2
- MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.4
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.1
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.2
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.3
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.2
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.2
- MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.2
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.4
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.4
- MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.4
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.1
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.4
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.5
- MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.4
- MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.1
- MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.2
- MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.1
- MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.2
- MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.3
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.1
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.3
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.3
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.2
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.1
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.1
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.4
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.2
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.4
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.1
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.3
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.5
- X30ug.mLProcept6776vsDMSO.6hA
- X5ug.mLProcept.6778vsDMSO.6h
- X20ug.mL.Prcp.6778.DMSO..6h..1
- X20ug.mL.Prcp.6778.DMSO..6h..2
- X20ug.mLProcept6778vsDMSO.6hA
- X20ug.mLProcept6778vsDMSO.6hB
- X10ug.mL.PA.1vsDMSO..6h
- X10ug.mL.PA.21vsDMSO..6h
- X50ug.mL.PA.21vsDMSO..6h
- X50ug.mL.PA.21vsDMSO..6hA
- X0.2ug.mL.PA824.DMSO..6h..1
- X0.4ug.mL.PA824.DMSO..6h..1
- X0.4ug.mL.PA824.DMSO..6h..4
- X2ug.mL.PA824.DMSO..6h..2
- X0.1ug.mL.Mtmvsctrl..0.33h..y
- X0.1ug.mL.Mtmvsctrl..0.75h..y
- X0.1ug.mL.Mtmvsctrl..1.5h..y
- X0.2ug.mL.Mtmvsctrl..0.33h..y
- X0.2ug.mL.Mtmvsctrl..0.75h..y
- X0.2ug.mL.Mtmvsctrl..2h..y
- X0.2ug.mL.Mtmvsctrl..2h.B.y
- X0.2ug.mL.Mtmvsctrl..2h.C.y
- X0.2ug.mL.Mtmvsctrl..4h.B.y
- X0.2ug.mL.Mtm.ctrl..4h...2.y
- Mtm.0.2ug.mL.vs.ctrl.8h.2.y
- X5ug.mL.AmivsEtOH..6h
- X5ug.mL.AmivsEtOH..6hA
- X5ug.mL.CapvsEtOH..6h
- X1mM.DTNBvsDMSO..6h
- X2mM.DTNBvsDMSO
- X5ug.mL.KCN.DMSO..6h..2
- X10ug.mL.LevovsEtOH..6h
- X10ug.mL.LevovsEtOH..6hA
- X10ug.mL.methoxatinvsDMSO..6h.A
- X20ug.mL.methoxatinvsDMSO..6h
- X2mMb.mercaptoethanolvsDMSO.6h
- X10ug.mL.Nvb.DMSO..6h..2
- X10ug.mL.Nvb.DMSO..6h..3
- X10ug.mL.RoxvsEtOH..6hA
- X30ug.mL.RoxvsEtOH..6hA
- X10ug.mL.TetvsEtOH..6hA
- X50ug.mL.VerapamilvsDMSO..6h
- X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.1
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.x
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4
- Tet_100uM_30M_01
- Tet_500ng_30M_01
- Tet_50ng_30M_01
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.y
- X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.y
- X5ug.ml.Streptomycin.vs.Ethanol.6hrs
- MTB.at.T0..biological.rep1
- MTB.at.T0..biological.rep2
- MTB.at.T0..biological.rep3
- MTB.at.T0..biological.rep4
- MTB.at.T30..biological.rep1
- MTB.at.T30..biological.rep2
- MTB.at.T30..biological.rep3
- MTB.at.T180..biological.rep2
- MTB.at.T180..biological.rep4
- MTB.at.T360..biological.rep1
- MTB.at.T360..biological.rep4