ID: 552f1701b744335b89d4b4a9
# Conditions: 225
# Genes: 18
Residual: 0.50101223059823
# Conditions: 225
# Genes: 18
Residual: 0.50101223059823
Bicluster Motifs
Bicluster Genes
- Rv0070c
- Rv0482
- Rv0534c
- Rv0880
- Rv0947c
- Rv1114
- Rv1618
- Rv2286c
- Rv2287
- Rv2443
- Rv2548
- Rv2770c
- Rv2906c
- Rv3034c
- Rv3100c
- Rv3291c
- Rv3481c
- Rv3771c
Bicluster Conditions
- MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1
- MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2
- High.iron.wt.vs.low.iron.wt.1a
- High.iron.wt.vs.low.iron.wt.2b
- High.iron.wt.vs.low.iron.wt.3a
- H37Rv.hypoxia.2hr.rep.2
- H37Rv.hypoxia.2hr.rep.3
- H37Rv.hypoxia.2hr.rep.4
- NRP.Day6..1
- NRP.Day8..1
- NRP.Day8..2
- NRP.Day8..3
- NRP.Day10..1
- NRP.Day10..2
- NRP.Day10..3
- NRP.Day12..1
- NRP.Day12..2
- NRP.Day12..3
- NRP.Day14..1
- NRP.Day14..2
- NRP.Day14..3
- NRP.Day14..4
- NRP.Day14..5
- NRP.Day14..6
- NRP.Day14..7
- NRP.Day14..8
- NRP.Day14..9
- NRP.Day20..2
- pH4.8vspH6.8..2h.
- pH4.8vspH6.8..2h.A
- pH4.8vspH6.8..4h.B
- pH4.8vspH6.8..6h.
- pH4.8vspH6.8..11h.
- pH5.2vspH6.8..11h.
- pH5.2vspH6.8..16h.
- pH5.6vspH6.8..11h.
- X4mM.H2O2.ctrl..2h...1
- X4mM.H2O2.ctrl..4h...1
- X4mM.H2O2.ctrl..4h...2
- H37Rv.hypoxia.4hr.rep.1
- H37Rv.hypoxia.4hr.rep.3
- H37Rv.hypoxia.4hr.rep.5
- H37Rv.hypoxia.8hr.rep.2
- H37Rv.hypoxia.1.day.rep.4
- H37Rv.hypoxia.1.day.rep.6
- H37Rv.hypoxia.7.day.rep.1
- H37Rv.hypoxia.7.day.rep.2
- H37Rv.hypoxia.7.day.rep.3
- H37Rv.diamide.1h.rep.1
- H37Rv.diamide.1h.rep.2
- H37Rv.diamide.1h.rep.3
- H37Rv.diamide.1h.rep.4
- H37Rv.diamide.1h.rep.5
- H37Rv.diamide.1h.rep.6
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
- CHP_25uM_24h_01
- CHP_25uM_2h_01
- Starvation_1254_OA50_12h_01
- Starvation_1254_OA50_12h_02
- Starvation_1254_OA50_12h_03
- Starvation_1254_OA50_12h_04
- Starvation_1254_OA50_24h_01
- Starvation_1254_OA50_24h_03
- Starvation_1254_OA50_24h_04
- Starvation_1254_OA50_3d_02
- Starvation_1254_OA50_3d_04
- Starvation_1254_OA50_5d_01
- Starvation_1254_OA50_5d_02
- Starvation_1254_OA50_5d_04
- Starvation_1254_OA50_6h_01
- Starvation_1254_OA50_6h_02
- Starvation_1254_OA50_6h_03
- Starvation_1254_OA50_6h_04
- Starvation_1254_PA50_24h_01
- Starvation_1254_PA50_24h_02
- Starvation_1254_PA50_24h_03
- Starvation_1254_PA50_24h_04
- Starvation_1254_PA50_6h_01
- Starvation_1254_PA50_6h_04
- Starvation_OA50_24h_02
- Starvation_OA50_24h_04
- Starvation_OA50_6h_03
- Starvation_OA50_6h_04
- Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
- H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
- Mtb.response.to.pH.6.5..6.replicates.
- BCG.2hr.phagosomal.profile
- MTB.in.Wild.type.macrophages.for.4hrs
- MTB.in.Wild.type.macrophages...IFNg.for.4hrs
- MTB.in.Wild.type.macrophages...IFNg.for.24hrs
- MTB.in.Wild.type.macrophages...IFNg.for.48hrs
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.1
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.3
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.5
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.6
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.1
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.3
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.5
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.1
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.3
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.5
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.6
- MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.1
- MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.3
- MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.5
- MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.6
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.1
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.5
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.6
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.1
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.3
- MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.2
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.3
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.5
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.6
- Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
- Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
- Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
- Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
- Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
- Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
- Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
- Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
- Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
- Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
- Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
- Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
- Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
- SG2.A0_N02A01c3
- SG2.B0_N02A09c3
- SG2.D0_N02A01c5
- SG6_A0_N7A10cy.3
- SG6_B0_N7A10cy.5
- SG7.AT0_N11A01cy.5
- SG8.A.Day.0.pre_fix_N37A04cy.5
- SG8.B.Day.0.pre_N37A12cy.3
- SG8.C.Day.0.post_N27A08cy.3
- SG8.D.Day.0.pre_N27A10cy.3
- SG8.D.Day.0.post_N27A11cy.3
- SG.ISB.3.0A_N30A01cy.3
- SG.ISB.3.0B_N30A01cy.5
- SG.ISB.3.0C_N30A02cy.3
- SG7.BT1_N11A06cy.5
- SG2.D1_N02A02c5
- SG2.B1_N02A10c3
- SG2.A1_N02A02c3
- SG2.B3_N02A12c3
- SG6D.T7_N11A02cy.3
- SG7.T7B_N11A09cy.5
- SG7.T7C_N11A10cy.5
- SG7.T7D_N11A11cy.5
- SG.ISB.3.7C_N30A03cy.5
- SG.ISB.3.7D_N30A04cy.3
- SG12.B1_N32A10cy.3
- SG12.A2_N32A03cy.3
- SG12.B2_N32A11cy.3
- SG12.A4_N32A04cy.3
- SG12.B4_N32A12cy.3
- SG12.C4_N32A08cy.5
- SG12.A6_N32A05cy.3
- SG12.B6_N32A01cy.5
- SG12.C6_N32A09cy.5
- SG12.A8_N32A06cy.3
- SG12.C8_N32A10cy.5
- SG12.C24_N32A11cy.5
- SG12.B24_N32A03cy.5
- SG12.A24_N32A07cy.3
- SG2.D8_N02A07c5
- SG6D.T8_N11A03cy.3
- SG6.D8_N5A09cy.5
- SG7.T8C_N11A07cy.3
- SG.ISB.3.8C_N30A05cy.5
- SG6.C11_N5A12cy.5
- SG12.A120_N32A08cy.3
- SG.ISB.3.12B_N30A07cy.3
- SG.ISB.3.12C_N30A07cy.5
- SG.ISB.3.12D_N30A08cy.3
- WT_140mM_NaCl_Rep1
- WT_140mM_NaCl_Rep2
- WT_140mM_NaCl_Rep4
- Rif.0.5ug.mL.vsDMSO.2.5h
- Rif.0.5ug.mL.vsDMSO.2.5hA
- Rif.5ug.mL.vsDMSO.2.5h
- X0.1ug.mL.RifpvsEtOH..6hA
- X0.5ug.mLRifapentinevsEtOH.6h
- X5ug.ml.Rifampicin.vs.DMSO.2.5hrs