Bicluster

ID: 552f289cb744335b89d52cc3
# Conditions: 205
# Genes: 26
Residual: 0.51511139275237

Bicluster Motifs

Bicluster Genes

  • Rv0039c
  • Rv0107c
  • Rv0117
  • Rv0738
  • Rv0739
  • Rv0798c
  • Rv1029
  • Rv1270c
  • Rv1313c
  • Rv1490
  • Rv1549
  • Rv1731
  • Rv1760
  • Rv1809
  • Rv1879
  • Rv2045c
  • Rv2261c
  • Rv2352c
  • Rv2770c
  • Rv3083
  • Rv3084
  • Rv3327
  • Rv3359
  • Rv3497c
  • Rv3728
  • Rv3798

Bicluster Conditions

  • H37Rv..7H9.roll.replicate.1.x
  • H37Rv..7H9.shake.replicate.2
  • H37Rv..7H9.shake.replicate.3
  • H37Rv..7H9.shake.replicate.4
  • H37Rv..Sauton.s.media.replicate.3
  • H37Rv..Youman.media.replicate.1
  • H37Rv..Youman.media.replicate.2
  • H37Rv..Youman.media.replicate.4
  • H37Rv..7H9.roll.replicate.4.y
  • Strain.CDC1551..replicate.1
  • Strain.CDC1551..replicate.2
  • Strain.CDC1551..replicate.3
  • Strain.CDC1551..replicate.4
  • Strain.1006...replicate.1
  • Strain.1006...replicate.2
  • Strain.1006...replicate.3
  • Strain.1006...replicate.4
  • Strain.1254...replicate.2
  • Strain.1254...replicate.1
  • Strain.3160..replicate.1
  • Strain.9700665..replicate.4
  • Strain.9800608..replicate.1
  • Strain.9800608..replicate.2
  • Strain.9800608...replicate.3
  • Strain.9802501..replicate.2
  • Strain.9802501..replicate.3
  • Strain.9802826..replicate.3
  • Strain.9802826..replicate.4
  • Strain.M3061a..replicate.3
  • H37Rv.Day.0.rep.1
  • H37Rv.Vs.M.bovis.rep1
  • MTB1254.Day.0.rep.3
  • MTB1254.vs..MTB1254.rep1
  • MTB1254.vs..MTB1254.rep2
  • MTB1254.vs..MTB1254.rep4
  • MTB1254.vs..MTB1254.rep5
  • MTB1254.vs..MTB1254.rep6
  • H37Rv.Day.0.rep.2
  • H37Rv.Day6.1
  • H37Rv.Day6.2
  • H37Rv.Day6.3
  • H37Rv.Day8.1
  • H37Rv.Day8.2
  • H37Rv.Day8.3
  • H37Rv.Day14.1
  • H37Rv.Day14.2
  • H37Rv.Day24.2
  • H37Rv.Day24.3
  • WT.t.6h.WT.t.0h..1
  • pH4.8vspH6.8..2h.A
  • pH4.8vspH6.8..4h.
  • pH4.8vspH6.8..4h.B
  • pH4.8vspH6.8..4h.C
  • pH4.8vspH6.8..6h.
  • pH4.8vspH6.8..11h.
  • pH5.2vspH6.8..2h.
  • pH5.2vspH6.8..5h.
  • pH5.2vspH6.8..10.5h.
  • pH5.2vspH6.8..16h.
  • pH5.6vspH6.8..2h.
  • pH5.6vspH6.8..4h.
  • pH5.6vspH6.8..5h.
  • pH5.6vspH6.8..7h.
  • pH5.6vspH6.8..11h.
  • Mtm.0.2ug.mL.vs.ctrl.8h.1.x
  • Mtm.0.2ug.mL.vs.ctrl.8h.2.x
  • Mtm.0.2ug.mL.vs.ctrl.12h.1.x
  • Succinate.7H9.based.medium..1
  • Succinate.7H9.based.medium..2
  • PBS.Tween.7H9
  • PBS.Tw.DMSOvs7H9..6h
  • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
  • H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
  • Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
  • Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
  • Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
  • Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
  • Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
  • Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
  • Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.4
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
  • Glucose_5mM_10min_01
  • Glycerol_1._30M_01
  • Starvation_1254_12h_01
  • Starvation_1254_24h_07
  • Starvation_1254_6h_01
  • Starvation_1254_6h_02
  • Starvation_1254_6h_06
  • Starvation_1254_6h_07
  • Starvation_1254_6h_08
  • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.2
  • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1
  • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.2
  • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1
  • CDC1551.Ctrl.vs.H37Rv.rep.2
  • CDC1551.Ctrl.vs.H37Rv.rep.3
  • Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
  • CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.1
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.4
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.2
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3
  • CDC1551.ctrl.vs.ctrl.at.0.hr.rep.2
  • H37Rv.reaeration.for.1hrs.rep.1
  • H37Rv.reaeration.for.1hrs.rep.2
  • H37Rv.reaeration.for.1hrs.rep.3
  • H37Rv.reaeration.for.1hrs.rep.4
  • H37Rv.reaeration.for.1hrs.rep.5
  • H37Rv.reaeration.for.1hrs.rep.6
  • H37Rv.reaeration.for.1hrs.rep.8
  • H37Rv.reaeration.for.4hrs.rep.1
  • H37Rv.reaeration.for.4hrs.rep.2
  • H37Rv.reaeration.for.4hrs.rep.3
  • H37Rv.reaeration.for.4hrs.rep.4
  • H37Rv.reaeration.for.4hrs.rep.6
  • H37Rv.reaeration.for.4hrs.rep.7
  • H37Rv.reaeration.for.4hrs.rep.8
  • H37Rv.reaeration.for.6hrs.rep.1
  • H37Rv.reaeration.for.6hrs.rep.2
  • H37Rv.reaeration.for.6hrs.rep.3
  • H37Rv.reaeration.for.6hrs.rep.4
  • H37Rv.reaeration.for.6hrs.rep.5
  • H37Rv.reaeration.for.12hrs.rep.2
  • H37Rv.reaeration.for.12hrs.rep.3
  • H37Rv.reaeration.for.12hrs.rep.4
  • H37Rv.reaeration.for.12hrs.rep.5
  • H37Rv.reaeration.for.12hrs.rep.6
  • H37Rv.reaeration.for.24hrs.rep.1
  • H37Rv.reaeration.for.24hrs.rep.2
  • H37Rv.reaeration.for.24hrs.rep.3
  • H37Rv.reaeration.for.24hrs.rep.4
  • H37Rv.reaeration.for.24hrs.rep.5
  • H37Rv.reaeration.for.24hrs.rep.6
  • Mtb.response.to.pH.5.5..6.replicates.
  • M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
  • MTB.in.Wild.type.macrophages.for.4hrs
  • MTB.in.Wild.type.macrophages.for.24hrs
  • MTB.in.Wild.type.macrophages.for.48hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.4hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.24hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.48hrs
  • Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
  • Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
  • Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
  • Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
  • Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
  • Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
  • SS_A1_RV.1
  • SS_A1_RV.3
  • WT_140mM_NaCl_Rep3
  • wild.type..mc.2.6020...biological.rep1
  • wild.type..mc.2.6020...biological.rep2
  • hip.mutant.KL2825..biological.rep1
  • hip.mutant.KL2849..biological.rep2
  • hip.mutant.HTS1090..biological.rep1
  • hip.mutant.HTS1090..biological.rep2
  • hip.mutant.HTS1105..biological.rep2
  • hip.mutant.HT1116..biological.rep1
  • hip.mutant.HT1120..biological.rep1
  • hip.mutant.HT1137..biological.rep1
  • hip.mutant.HT1137..biological.rep2
  • Mtm.0.2ug.mL.vs.ctrl.8h.1.y
  • Mtm.0.2ug.mL.vs.ctrl.8h.2.y