ID: 552f289cb744335b89d52d15
# Conditions: 197
# Genes: 25
Residual: 0.48517450694956
# Conditions: 197
# Genes: 25
Residual: 0.48517450694956
Bicluster Motifs
Bicluster Genes
- Rv0038
- Rv0049
- Rv0478
- Rv0491
- Rv0578c
- Rv0615
- Rv0865
- Rv1223
- Rv1224
- Rv1336
- Rv1602
- Rv1605
- Rv1616
- Rv2009
- Rv2010
- Rv2052c
- Rv2134c
- Rv2507
- Rv2867c
- Rv2918c
- Rv3367
- Rv3579c
- Rv3581c
- Rv3582c
- Rv3607c
Bicluster Conditions
- H37Rv..7H9.roll.replicate.2.x
- H37Rv..7H9.roll.replicate.4.x
- H37Rv..7H9.shake.replicate.2
- H37Rv..7H9.shake.replicate.3
- H37Rv..Dubos.media.replicate.1
- H37Rv..Dubos.media.replicate.2
- H37Rv..Dubos.media.replicate.3
- H37Rv..Dubos.media.replicate.4
- H37Rv..7H9.roll.replicate.1.y
- H37Rv..7H9.roll.replicate.3.y
- Strain.CDC1551..replicate.1
- Strain.CDC1551..replicate.2
- Strain.CDC1551..replicate.4
- Strain.1006...replicate.1
- Strain.1006...replicate.3
- Strain.1254...replicate.4
- Strain.1254...replicate.2
- Strain.1254...replicate.3
- Strain.1843..replicate.1
- Strain.1843...replicate.2
- Strain.3160..replicate.1
- Strain.3160...replicate.3
- Strain.9800608..replicate.2
- Strain.9800608...replicate.3
- Strain.9800608..replicate.4
- Strain.9802501..replicate1
- Strain.9802501..replicate.2
- Strain.9802501..replicate.3
- Strain.9802501..replicate.4
- Strain.9802826..replicate.2
- Strain.M3061a..replicate.1
- H37Rv.Day.0.rep.1
- Strain.M3061a..replicate.4
- H37Rv.Vs.M.bovis.rep1
- H37Rv.Vs.M.bovis.rep3
- H37Rv.Vs.M.bovis.rep4
- MTB.strain.1254.Ctrl.vs.high.aeration.rep1
- MTB.strain.1254.Ctrl.vs.high.aeration.rep2
- MTB.strain.1254.Ctrl.vs.high.aeration.rep3
- MTB1254.Day.0.rep.3
- MTB1254.vs..MTB1254.rep3
- MTB1254.vs..MTB1254.rep4
- MTB1254.vs..MTB1254.rep6
- H37Rv.Day.0.rep.2
- H37Rv.Day.0.rep.3
- H37Rv.Day6.2
- H37Rv.Day6.3
- H37Rv.Day8.1
- H37Rv.Day8.3
- H37Rv.Day14.1
- H37Rv.Day14.3
- H37Rv.Day24.1
- H37Rv.Day24.3
- H37Rv.Day60.1
- H37Rv.Day60.2
- H37Rv.Day60.3
- WT.t.6h.WT.t.0h..2
- WT.t.0h.WT.t.6h..2
- pH4.8vspH6.8..2h.
- pH4.8vspH6.8..2h.B
- pH4.8vspH6.8..4h.
- pH4.8vspH6.8..4h.B
- pH4.8vspH6.8..4h.C
- pH4.8vspH6.8..5h.
- pH4.8vspH6.8..5.5h.
- pH4.8vspH6.8..7h.
- pH4.8vspH6.8..11h.
- pH5.2vspH6.8..5.5h.
- pH5.2vspH6.8..11h.
- pH5.6vspH6.8..2h.
- pH5.6vspH6.8..5h.
- pH5.6vspH6.8..16h.
- PBS.Tween.7H9
- PBS.Tw.DMSOvs7H9..6h
- H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
- Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
- Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
- Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
- Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
- H37Rv.wild.type.Vs.H37Rv.wild.type.rep.1
- H37Rv.wild.type.Vs.H37Rv.wild.type.rep.3
- H37Rv.wild.type.Vs.H37Rv.wild.type.rep.4
- H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
- Starvation_1254_12h_01
- Starvation_1254_12h_02
- Starvation_1254_12h_03
- Starvation_1254_12h_04
- Starvation_1254_24h_01
- Starvation_1254_24h_03
- Starvation_1254_24h_04
- Starvation_1254_24h_05
- Starvation_1254_24h_07
- Starvation_1254_24h_08
- Starvation_1254_3d_01
- Starvation_1254_3d_02
- Starvation_1254_3d_03
- Starvation_1254_3d_04
- Starvation_1254_5d_01
- Starvation_1254_5d_02
- Starvation_1254_5d_03
- Starvation_1254_5d_04
- Starvation_1254_6h_03
- Starvation_1254_6h_04
- Starvation_1254_6h_08
- H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.1
- H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.2
- H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.2
- H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3
- CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.1
- CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.2
- CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1
- Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.1
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.2
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.4
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.1
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.2
- BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.5
- H37Rv.reaeration.for.1hrs.rep.1
- H37Rv.reaeration.for.1hrs.rep.2
- H37Rv.reaeration.for.1hrs.rep.8
- H37Rv.reaeration.for.4hrs.rep.1
- H37Rv.reaeration.for.4hrs.rep.3
- H37Rv.reaeration.for.4hrs.rep.4
- H37Rv.reaeration.for.4hrs.rep.8
- H37Rv.reaeration.for.6hrs.rep.2
- H37Rv.reaeration.for.12hrs.rep.4
- Mtb.response.to.pH.6.5..6.replicates.
- BCG.2hr.phagosomal.profile
- BCG.24hr.phagosomal.profile
- M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
- MTB.in.Wild.type.macrophages.for.48hrs
- MTB.in.Wild.type.macrophages...IFNg.for.4hrs
- Russell_Lab_Spotted_Oligos_1.2..14.day.resting.macrophage.infection.2hr..rep.2..Russell_Lab_Spotted_Oligos_1.2..
- Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
- Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
- Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
- Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
- Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
- Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
- Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
- SS_A1_RV.1
- SS_A1_RV.2
- SS_A1_RV.3
- WT_140mM_NaCl_Rep2
- wild.type..mc.2.6020...biological.rep1
- hip.mutant.KL2801..biological.rep2
- hip.mutant.KL2849..biological.rep2
- hip.mutant.HTS1090..biological.rep1
- hip.mutant.HTS1090..biological.rep2
- hip.mutant.HTS1105..biological.rep1
- hip.mutant.HT1116..biological.rep1
- hip.mutant.HT1130..biological.rep1
- hip.mutant.HT1130..biological.rep2
- hip.mutant.HT1134..biological.rep1
- hip.mutant.HT1137..biological.rep1
- hip.mutant.HT1137..biological.rep2
- hip.mutant.HT1170..biological.rep2
- Mtm.0.2ug.mL.vs.ctrl.8h.1.y