Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0179c
• Rv0213c
• Rv0249c
• Rv0550c
• Rv0599c
• Rv1171
• Rv1690
• Rv2036
• Rv2050
• Rv2052c
• Rv2204c
• Rv2245
• Rv2466c
• Rv2694c
• Rv2735c
• Rv2846c
• Rv2987c
• Rv2988c
• Rv3078
• Rv3229c
• Rv3230c
• Rv3260c
• Rv3463
• Rv3526
• Rv3527
• Rv3848

Bicluster Conditions

• H37Rv.0.05..SDS.exposure.for.1h.rep.1
• H37Rv.0.05..SDS.exposure.for.1h.rep.2
• H37Rv.0.05..SDS.exposure.for.1h.rep.3
• H37Rv.0.05..SDS.exposure.for.1h.rep.4
• H37Rv.0.05..SDS.exposure.for.1h.rep.5
• H37Rv.0.05..SDS.exposure.for.1h.rep.6
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.6
• H37Rv.vs..H37Rv.SDS.treated.rep.1
• H37Rv.vs..H37Rv.SDS.treated.rep.3
• H37Rv.0.2..Oxygen..2h..1
• H37Rv.0.2..Oxygen..2h..2
• H37Rv.0.2..Oxygen..2h..3
• H37Rv.0.2..Oxygen..2h..5
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.6
• pH4.8vspH6.8..7h.
• pH5.6vspH6.8..4h.
• Whole.Lung.Surfactant.2hrs.rep.1
• Whole.Lung.Surfactant.2hrs.rep.3
• Whole.Lung.Surfactant.30min.rep.1
• Whole.Lung.Surfactant.30min.rep.4
• Whole.Lung.Surfactant.30min.rep.5
• Extracted.Lung.Surfactant.2hrs.rep.2
• Extracted.Lung.Surfactant.30min.rep.1
• Extracted.Lung.Surfactant.30min.rep.3
• Purified.Surfactant.Lipids.2hrs.rep.1
• Purified.Surfactant.Lipids.2hrs.rep.2
• Purified.Surfactant.Lipids.30min.rep.1
• Purified.Surfactant.Lipids.30min.rep.2
• Purified.Human.SP.A.Coated.2hrs.rep2
• Purified.Human.SP.A.Uncoated.2hrs.rep1
• Purified.Human.SP.A.Uncoated.2hrs.rep3
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
• BCG.2hr.phagosomal.profile
• BCG.24hr.phagosomal.profile
• M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
• MTB.in.Wild.type.macrophages.for.4hrs
• MTB.in.Wild.type.macrophages.for.48hrs
• MTB.in.Wild.type.macrophages...IFNg.for.4hrs
• MTB.in.Wild.type.macrophages...IFNg.for.48hrs
• Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
• Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
• Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
• Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
• Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
• Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
• Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
• Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
• Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
• Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
• WT_140mM_NaCl_Rep1
• WT_140mM_NaCl_Rep4
• X40ug.mL.5CL.pH5.6..2h..1
• X40ug.mL.5CL.pH5.6..4h..2
• X80ug.mL.5CL.pH5.6..2h.
• X0.12mg.mL.BZA.pH5.6..2h.
• X0.12mg.mL.BZA.pH5.6..4h..2
• X0.12mg.mL.BZAvspH5.6..5h.
• X0.12mg.mL.BZAvspH5.6..7h.
• X0.12mg.mL.BZAvspH5.6..11h.
• X0.12mg.mL.Nam.pH5.6..4h..2
• X0.12mg.mL.NamvspH5.6..5.5h.
• X0.12mg.mL.NamvspH5.6..7h.
• X0.12mg.mL.PZA.pH5.6..2h.
• X0.12mg.mL.PZA.pH5.6..2.5h.
• X0.12mg.mL.PZA.pH5.6..4h..1
• X0.12mg.mL.PZA.pH5.6..4h..2
• X0.12mg.mL.PZA.pH5.6..5h.
• X0.12mg.mL.PZAvspH5.6..10.5h.
• X1.2mg.mL.PZA.pH5.6..2h..
• X1.2mg.mL.PZAvspH5.6..4h.
• X1.2mg.mL.PZAvspH5.6..4h.A
• X1.2mg.mL.PZAvspH5.6..4h.B
• X1.2mg.mL.PZA.pH5.6..5h.
• X1.2mg.mL.PZAvspH5.6..6h.
• X1.2mg.mL.PZAvspH5.6..6h.A
• X1.2mg.mL.PZAvspH5.6..10.5h.
• X1.2mg.mL.PZAvspH5.6..16h.