Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0252
• Rv0253
• Rv0334
• Rv0611c
• Rv0738
• Rv0745
• Rv0919
• Rv0953c
• Rv0959
• Rv1019
• Rv1045
• Rv1147
• Rv1536
• Rv1661
• Rv1785c
• Rv1892
• Rv1915
• Rv2575
• Rv2597
• Rv2612c
• Rv2895c
• Rv3317

Bicluster Conditions

• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.x
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.3
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4.x
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
• pH4.8vspH6.8..2h.
• pH4.8vspH6.8..2h.B
• pH4.8vspH6.8..4h.
• pH4.8vspH6.8..4h.C
• pH4.8vspH6.8..5.5h.
• pH4.8vspH6.8..6h.
• pH4.8vspH6.8..7h.
• pH4.8vspH6.8..11h.
• pH5.2vspH6.8..5h.
• pH5.2vspH6.8..5.5h.
• pH5.2vspH6.8..10.5h.
• pH5.2vspH6.8..11h.
• pH5.2vspH6.8..16h.
• pH5.6vspH6.8..2h.
• pH5.6vspH6.8..2h.A
• pH5.6vspH6.8..4h.
• pH5.6vspH6.8..4h.B
• pH5.6vspH6.8..5h.
• pH5.6vspH6.8..7h.
• pH5.6vspH6.8..11h.
• pH5.6vspH6.8..16h.
• X0.02mM.GSNOvsDMSO..6h
• X0.1mM.GSNO.DMSO..3.5h
• X0.1mM.GSNOvsDMSO..4h
• X0.1mM.GSNO.DMSO..6h
• X0.1mM.GSNOvsDMSO..6h.
• X0.1mM.GSNOvsDMSO..6h.A
• aceatate.induction.2
• aceatate.induction.3
• Acetate.3mM.10m.02
• Acetate.3mM.10m.03
• Acetate.3mM.10m.07
• Acetate.3mM.30m.03
• Acetate.3mM.30m.06
• Acetate.3mM.60m.04
• Starvation_1254_24h_02
• Starvation_1254_24h_03
• Starvation_1254_24h_06
• Starvation_1254_3d_01
• Starvation_1254_3d_02
• Starvation_1254_3d_04
• Starvation_1254_5d_01
• Starvation_1254_6h_03
• Starvation_1254_6h_04
• Starvation_1254_6h_07
• Starvation_1254_6h_08
• Mtb.response.to.pH.5.5..6.replicates.
• Mtb.response.to.pH.6.5..6.replicates.
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.7
• MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.2
• MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.5
• WT_140mM_NaCl_Rep2
• X1ug.mL..59vsDMSO..6hA
• X10ug.mL..59.DMSO..6h
• X10ug.mL..59vsDMSO..6hA
• X1ug.mL..109vsDMSO..6h
• X1ug.mL..109vsDMSO..6hA
• X10ug.mL..109.DMSO..6h
• X10ug.mL..109vsDMSO..6h
• X10ug.mL..109vsDMSO..6hA
• X.109..0.1ug.mL..vs.DMSO..12h..GEO.acc.GSM28050.
• X.109..1ug.mL..vs.DMSO..12h..replicate.1..GEO.ac.GSM28051.
• X.109..1ug.mL..vs.DMSO..12h..replicate.2..GEO.acc.GSM28052.
• X.109..10ug.mL..vs.DMSO..12h..replicate.1..GEO.acc..GSM28053.
• X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054.
• X1ug.mL..241vsDMSO..6h
• X1ug.mL..241vsDMSO..6hA
• X10ug.mL..241.DMSO..6h
• X10ug.mL..241vsDMSO..6h
• X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046.
• X.241..1ug.mL..DMSO..12h..1
• X.241..10ug.mL..DMSO..12h..1
• X.241..10ug.mL..DMSO..12h..2
• X20ug.mL.Prcp.6776.DMSO..6h..1
• X20ug.mL.Procept.6776vsDMSO..6h
• X20ug.mL.Procept6776vsDMSO..6h
• X30ug.mLProcept6776vsDMSO.6h
• X30ug.mLProcept6776vsDMSO.6hA
• X5ug.mLProcept.6778vsDMSO.6hA
• X20ug.mL.Prcp.6778.DMSO..6h..1
• X20ug.mL.Prcp.6778.DMSO..6h..2
• X20ug.mLProcept6778vsDMSO.6h
• X20ug.mLProcept6778vsDMSO.6hA
• X20ug.mLProcept6778vsDMSO.6hB
• X40ug.mLProcept6778vsDMSO.6h
• X40ug.mLProcept6778vsDMSO.6hA
• X10ug.mL.PA.21vsDMSO..6h
• X0.2ug.mL.PA824.DMSO..6h..2
• X0.4ug.mL.PA824.DMSO..6h..1
• X0.4ug.mL.PA824.DMSO..6h..2
• X0.4ug.mL.PA824.DMSO..6h..3
• X2ug.mL.PA824.DMSO..6h..1
• DIPED.5ug.mL.vs.DMSO.12h.1
• DIPED.5ug.mL.vs.DMSO.12h.2
• DIPED.10ug.mL.vs.DMSO.12h.1
• DIPED.10ug.mL.vs.DMSO.12h.2
• DIPED..50ug.mL..DMSO..12h
• DIPED.50ug.mL.vs.DMSO.12h.1
• DIPED.50ug.mL.vs.DMSO.12h.2
• DIPED..100ug.mL..DMSO..12h..1
• DIPED..100ug.mL..DMSO..12h..2
• DIPED..100ug.mL..DMSO..12h..3
• X0.1mg.mLTriclosanvsEtOH.6hB
• X0.1mg.mLTriclosanvsEtOH.6hC
• X0.15mg.mL.TricvsEtOH..6h
• X0.15mg.mL.TricvsEtOH..6hA
• X10ug.mL.TriclosanvsDMSO..6h
• X10ug.mL.TriclosanvsDMSO..6hA
• X10ug.mL.TriclosanvsDMSO..6hB
• X50ug.mL.Triclosan.DMSO..6h
• X50ug.mL.Triclosan.EtOH
• X50ug.mL.TriclosanvsEtOH..6h
• X50ug.mL.TriclosanvsEtOH..6hA
• X100ug.mL.TriclosanvsEtOH..6h
• X100ug.mL.TriclosanvsEtOH..6hA
• X10ug.mL.EMBvsDMSO..6h
• X10ug.mL.EMBvsDMSO..6hA
• EMB..10ug.mL..DMSO..12h
• EMB.10ug.mL.vs.DMSO.12h.1
• EMB.10ug.mL.vs.DMSO.12h.2
• EMB.10ug.mL.vs.DMSO.12h.3
• EMB.10ug.mL.vs.DMSO.12h.4
• X20ug.mL.ethambutol.DMSO
• X0.2mg.mL.AmpvsEtOH..6h
• X12.5ug.mL.AntimycinvsDMSO..6h
• X25ug.mL.AntimycinvsDMSO..6h
• X50ug.mLAntimycinAvsDMSO..6hA
• X50ug.mLAntimycinAvsDMSO..6hB
• X0.32ug.mL.CervsEtOH..6h
• X0.32ug.mL.CervsEtOH..6hA
• X0.5ug.mL.CervsEtOH..6h
• X0.5ug.mL.CervsEtOH..6hA
• X0.5ug.mL.CeruleninvsDMSO..6hB
• X0.5ug.mL.CeruleninvsDMSO..6hC
• X20ug.mL.Cephalexin.Ctrl..6h..1
• X100ug.mL.Cephalexin.Ctrl..6h
• X100ug.mL.Ceph.DMSO..6h
• X100ug.mL.Cphx.DMSO..6h
• X12ug.mLEthionamidevsEtOH.6h
• X40ug.mL.EtavsEtOH..6h
• X40ug.mL.EtavsEtOH..6hA
• X0.2ug.mL.INH.EtOH..6h
• X0.4ug.mL.INHvsEtOH..6h
• X0.4ug.mL.INHvsEtOH..6hA
• X20ug.mL.methoxatinvsDMSO..6h
• X2mMb.mercaptoethanolvsDMSO.6h
• X130ug.mL.TLMvsDMSO..6h
• X130ug.mL.TLMvsDMSO..6hA
• X0.13mg.mL.TLMvsDMSO..6h
• X0.13mg.mL.TLMvsDMSO..6hA
• X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3
• X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.x
• X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
• X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.1
• X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.2
• X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2
• X130ug.ml.TLM.vs.DMSO.6hrs.rep.1
• X130ug.ml.TLM.vs.DMSO.6hrs.rep.2
• X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.1
• X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.2
• X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.3
• X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.4
• X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.1
• X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2
• MTB1254.3524.1._INH_20MIN
• X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.y
• X10ug.ml.Ethambutol.vs.DMSO.12hrs.3
• X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.3.y
• H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
• H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
• H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
• H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
• H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1
• H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.1
• H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.2
• H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.1
• H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.2
• H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.1
• H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.1
• MTB.at.T0..biological.rep1
• MTB.at.T0..biological.rep4