ID: 552f4c13b744335b89d606d8
# Conditions: 274
# Genes: 25
Residual: 0.48881225399261
# Conditions: 274
# Genes: 25
Residual: 0.48881225399261
Bicluster Motifs
Bicluster Genes
- Rv0270
- Rv0273c
- Rv0400c
- Rv0577
- Rv0622
- Rv0670
- Rv0673
- Rv0674
- Rv0808
- Rv0898c
- Rv1350
- Rv1834
- Rv2043c
- Rv2302
- Rv3010c
- Rv3046c
- Rv3066
- Rv3226c
- Rv3408
- Rv3734c
- Rv3766
- Rv3776
- Rv3830c
- Rv3866
Bicluster Conditions
- H37Rv.0.05..SDS.exposure.for.1h.rep.1
- H37Rv.0.05..SDS.exposure.for.1h.rep.3
- H37Rv.0.05..SDS.exposure.for.1h.rep.4
- H37Rv.0.05..SDS.exposure.for.1h.rep.5
- MTB.strain.1254.Ctrl.vs.high.aeration.rep1
- MTB.strain.1254.Ctrl.vs.high.aeration.rep3
- MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.1
- MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2
- MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.3
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.4
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.6
- H37Rv.vs..H37Rv.SDS.treated.rep.4
- H37Rv.vs..H37Rv.SDS.treated.rep.5
- H37Rv.0.2..Oxygen..2h..1
- H37Rv.0.2..Oxygen..2h..2
- H37Rv.0.2..Oxygen..2h..3
- H37Rv.0.2..Oxygen..2h..4
- H37Rv.0.2..Oxygen..2h..6
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5
- pH4.8vspH6.8..2h.A
- pH4.8vspH6.8..2h.B
- pH4.8vspH6.8..5h.
- pH4.8vspH6.8..7h.
- pH5.2vspH6.8..16h.
- pH5.6vspH6.8..2h.
- pH5.6vspH6.8..2h.A
- pH5.6vspH6.8..4h.B
- pH5.6vspH6.8..5h.
- pH5.6vspH6.8..7h.
- pH5.6vspH6.8..16h.
- X0.1ug.mL.Mtmvsctrl..0.33h..x
- X0.1ug.mL.Mtmvsctrl..1.5h..x
- X0.2ug.mL.Mtmvsctrl..0.75h..x
- X0.2ug.mL.Mtmvsctrl..2h.B.x
- X0.2ug.mL.Mtmvsctrl..4h..x
- X0.2ug.mL.Mtmvsctrl..4h.A.x
- X0.2ug.mL.Mtm.ctrl..4h...1.x
- X0.2ug.mL.Mtm.ctrl..4h...2.x
- PBS.Tween.7H9
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.5
- Whole.Lung.Surfactant.2hrs.rep.3
- Whole.Lung.Surfactant.30min.rep.1
- Whole.Lung.Surfactant.30min.rep.4
- Extracted.Lung.Surfactant.30min.rep.1
- Extracted.Lung.Surfactant.30min.rep.4
- Purified.Surfactant.Lipids.2hrs.rep.2
- Purified.Surfactant.Lipids.30min.rep.1
- Purified.Surfactant.Lipids.30min.rep.2
- Purified.Human.SP.A.Coated.2hrs.rep1
- Purified.Human.SP.A.Coated.2hrs.rep2
- Purified.Human.SP.A.Uncoated.2hrs.rep2
- X20ug.ml.KCN.vs.DMSO.6hrs.x
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
- Glucose_5mM_10min_01
- Glycerol_1._10M_01
- Starvation_1254_12h_01
- Starvation_1254_12h_02
- Starvation_1254_24h_04
- Starvation_1254_24h_06
- Starvation_1254_24h_08
- Starvation_1254_3d_04
- Starvation_1254_5d_01
- Starvation_1254_6h_01
- Starvation_1254_6h_02
- Starvation_1254_6h_04
- Starvation_1254_6h_05
- Starvation_1254_6h_06
- Starvation_1254_6h_07
- H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.1
- H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3
- H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1
- Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
- H37Rv.reaeration.for.1hrs.rep.2
- H37Rv.reaeration.for.1hrs.rep.3
- H37Rv.reaeration.for.1hrs.rep.4
- H37Rv.reaeration.for.1hrs.rep.5
- H37Rv.reaeration.for.1hrs.rep.6
- H37Rv.reaeration.for.4hrs.rep.3
- H37Rv.reaeration.for.4hrs.rep.6
- H37Rv.reaeration.for.6hrs.rep.1
- H37Rv.reaeration.for.6hrs.rep.3
- H37Rv.reaeration.for.12hrs.rep.1
- H37Rv.reaeration.for.12hrs.rep.2
- H37Rv.reaeration.for.12hrs.rep.3
- H37Rv.reaeration.for.12hrs.rep.4
- H37Rv.reaeration.for.12hrs.rep.5
- H37Rv.reaeration.for.12hrs.rep.6
- H37Rv.reaeration.for.24hrs.rep.1
- H37Rv.reaeration.for.24hrs.rep.2
- H37Rv.reaeration.for.24hrs.rep.4
- H37Rv.reaeration.for.24hrs.rep.5
- Mtb.response.to.pH.5.5..6.replicates.
- Mtb.response.to.pH.6.5..6.replicates.
- BCG.2hr.phagosomal.profile
- BCG.24hr.phagosomal.profile
- M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
- M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
- MTB.in.Wild.type.macrophages.for.4hrs
- MTB.in.Wild.type.macrophages.for.48hrs
- MTB.in.Wild.type.macrophages...IFNg.for.4hrs
- MTB.in.Wild.type.macrophages...IFNg.for.24hrs
- MTB.in.Wild.type.macrophages...IFNg.for.48hrs
- Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
- Russell_Lab_Spotted_Oligos_1.2..14.day.resting.macrophage.infection.2hr..rep.2..Russell_Lab_Spotted_Oligos_1.2..
- Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
- Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
- Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
- Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
- MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.1
- MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.3
- X1ug.mL..59vsDMSO..6h
- X1ug.mL..59vsDMSO..6hA
- X10ug.mL..59.DMSO..6h
- X1ug.mL..109vsDMSO..6h
- X1ug.mL..109vsDMSO..6hA
- X10ug.mL..109.DMSO..6h
- X.109..0.1ug.mL..vs.DMSO..12h..GEO.acc.GSM28050.
- X1ug.mL..241vsDMSO..6h
- X1ug.mL..241vsDMSO..6hA
- X0.2ug.mL..111891.DMSO..5.5h..1
- X0.2ug.mL..111891.DMSO..5.5h..2
- X1ug.mL..111891vsDMSO..6h
- X2ug.mL..111891vsDMSO..6h
- X1ug.mL..111891.DMSO..12h..1
- X0.5ug.mL..111895vsDMSO..6h
- X0.5ug.mL..111895vsDMSO.6h
- X1ug.mL..111895vsDMSO..6h
- X1ug.mL..111895vsDMSO..6hA
- X2ug.mL..111895vsDMSO..6h
- X2ug.mL..111895vsDMSO..6hB
- X0.5ug.mL..121940vsDMSO.6h
- X2ug.mL..121940vsDMSO..6h
- X2ug.mL..121940vsDMSO..6hA
- X1ug.mL..121940.DMSO..12h
- X0.1mMGSNO.20ug.mLCPZvsDMSO.6h
- X25ug.mLCPZ.0.1mMGSNO.DMSO..1
- X25ug.mLCPZ.0.1mMGSNO.DMSO..3
- X25ug.mLCPZ.0.1mMGSNOvsDMSO.A
- X5ug.mL.CFZ.0.1mM.GSNO.DMSO..1
- X5ug.mLCFZ.0.1mMGSNOvsDMSO.A
- X0.1mMGSNO.5ug.mLKCNvsDMSO.6h
- X0.1mMGSNO.5ug.mLKCNvsDMSO.6h.A
- X0.2ug.mL.Mtmvsctrl..2h.B.y
- X0.2ug.mL.Mtmvsctrl..4h..y
- X0.2ug.mL.Mtm.ctrl..4h...1.y
- X0.2ug.mL.Mtm.ctrl..4h...2.y
- X0.1mg.mL.TriclosanvsEtOH..6h
- X0.1mg.mLTriclosanvsEtOH.6hB
- X0.15mg.mL.TricvsEtOH..6h
- X0.15mg.mL.TricvsEtOH..6hA
- X10ug.mL.TriclosanvsDMSO..6h
- X10ug.mL.TriclosanvsDMSO..6hA
- X10ug.mL.TriclosanvsDMSO..6hB
- X10ug.mL.TriclosanvsDMSO..6hC
- X50ug.mL.Triclosan.DMSO..6h
- X50ug.mL.Triclosan.EtOH
- X50ug.mL.TriclosanvsEtOH..6h
- X50ug.mL.TriclosanvsEtOH..6hA
- X100ug.mL.TriclosanvsEtOH..6hA
- X10ug.mL.EconazolevsEtOH..6h
- X24ug.mL.Econazole.DMSO..6h..2
- X10ug.mL.EMBvsDMSO..6h
- X10ug.mL.EMBvsDMSO..6hA
- X0.2mg.mL.AmpvsEtOH..6h
- X0.2mg.mL.AmpvsEtOH..6hA
- X10ug.mL.clofazimine.DMSO..6h
- X13ug.mL.clfzine.DMSO..6h..1
- X0.32ug.mL.CervsEtOH..6h
- X0.32ug.mL.CervsEtOH..6hA
- X0.5ug.mL.CervsEtOH..6h
- X0.5ug.mL.CervsEtOH..6hA
- X0.5ug.mL.CeruleninvsDMSO..6hA
- X0.5ug.mL.CeruleninvsDMSO..6hB
- X0.5ug.mL.CeruleninvsDMSO..6hC
- X20ug.mL.chlorprmz.DMSO..6h..1
- X20ug.mL.chlorprmz.DMSO..6h..2
- X20ug.mL.CPZvsDMSO..6h.A
- X25ug.mL.CPZvsDMSO..6h.B
- X24ug.mL.cltrmazole.DMS..6h..3
- X10uM.CCCP.DMSO..6h
- X50uM.CCCP.DMSO..6h..1
- X50uM.CCCP.DMSO..6h..2
- X50uM.CCCPvsDMSO..6h
- X0.5mM.DNP.DMSO..6h
- X1mM.DNP.DMSO..6h..1
- X1mM.DNP.DMSO..6h..2
- X2.5mM.Dinitrophenol.DMSO..6h
- X20uM.DCCD.DMSO..6h..1
- X20uM.DCCD.DMSO..6h..2
- X100uM.DipyridylvsCtrl..6hA
- X100uM.Dipyridylvsctrl..6h
- X200uM.Dipyridylvsctrl..6hA
- X150uM.Deferroxaminevsctrl..6hA
- X150uM.Deferroxaminevsctrl..6hB
- X250uM.DeferroxaminevsDMSO..6h
- X2mM.DTTvsDMSO..6h
- X40ug.mL.EtavsEtOH..6h
- X5ug.mL.KCN.DMSO..6h..1
- X5ug.mL.KCN.DMSO..6h..2
- X20ug.mL.KCN.DMSO..6h
- X50uM.NigericinvsDMSO..6h
- X10ug.mL.Nvb.DMSO..6h..2
- X10ug.mL.Nvb.DMSO..6h..3
- X9ug.mLAscidideminNpvsDMSO.6h
- X9ug.mLAscidideminNpvsDMSO.6hA
- X130ug.mL.TLMvsDMSO..6h
- X130ug.mL.TLMvsDMSO..6hA
- X0.2mg.mL.TLMvsEtOH..6h
- X0.2mg.mL.TLMvsEtOH..6hA
- X10ug.mL.TRZ.DMSO..6h..1
- X10ug.mL.TRZ.DMSO..6h..2
- X25ug.mL.TRZ.DMSO..6h
- X1uM.ValinomycinvsDMSO..6h
- X2mM.ZnSO4.DMSO..6h
- X20ug.ml.KCN.vs.DMSO.6hrs.y
- X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.3.x
- X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1
- X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
- X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.1
- X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2
- X130ug.ml.TLM.vs.DMSO.6hrs.rep.1
- X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.1
- X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.2
- X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.1
- X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.2
- X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.3
- X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.4
- X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.1
- X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2
- MTB1254_INH_20MIN
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1
- CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.1
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.1
- CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.1
- CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.2
- CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.2
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.2
- H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
- H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
- H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
- H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.1
- H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.2
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.2
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.1
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.2
- H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.2
- H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.1