Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0046c
• Rv0142
• Rv0184
• Rv0352
• Rv0794c
• Rv0848
• Rv0849
• Rv0850
• Rv1334
• Rv1335
• Rv1336
• Rv1474c
• Rv2372c
• Rv2397c
• Rv2398c
• Rv2399c
• Rv2640c
• Rv2743c
• Rv2792c
• Rv2963
• Rv3074
• Rv3119
• Rv3120
• Rv3222c
• Rv3596c

Bicluster Conditions

• X4mM.H2O2vsctrl..2h.A
• X4mM.H2O2.ctrl..2h...1
• X4mM.H2O2.ctrl..4h...2
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
• Starvation_1254_12h_02
• Starvation_1254_12h_04
• Starvation_1254_24h_01
• Starvation_1254_24h_04
• Starvation_1254_24h_08
• Starvation_1254_3d_04
• Starvation_1254_6h_02
• Starvation_1254_6h_03
• Starvation_1254_6h_05
• Starvation_1254_6h_06
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
• BCG.24hr.phagosomal.profile
• MTB.in.Wild.type.macrophages.for.48hrs
• MTB.in.Wild.type.macrophages...IFNg.for.24hrs
• MTB.in.Wild.type.macrophages...IFNg.for.48hrs
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.1
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.2
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.2
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.5
• Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
• Russell_Lab_Spotted_Oligos_1.2..14.day.resting.macrophage.infection.2hr..rep.2..Russell_Lab_Spotted_Oligos_1.2..
• Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
• Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
• Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
• Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
• Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
• Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
• MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.1
• MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.2
• MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.4
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.2
• MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.3
• MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.4
• MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.1
• MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.1
• MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.2
• MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.1
• MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.2
• MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.3
• MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.4
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.1
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.2
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.3
• MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.1
• MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.3
• MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.4
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.1
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.2
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.3
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.4
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.5
• MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.1
• MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.2
• MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.3
• MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.4
• MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.1
• MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.3
• MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.1
• MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.2
• MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.4
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.1
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.2
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.3
• MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1
• MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.3
• MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.4
• MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.3
• MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.1
• MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.2
• MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.3
• MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.1
• MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.3
• MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.4
• MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.1
• MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.2
• MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.3
• MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.4
• MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.1
• MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3
• MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4
• MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1
• MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.3
• MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.4
• MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.1
• MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.2
• MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.3
• MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.1
• MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.3
• MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.4
• X5ug.mL.AmivsEtOH..6h
• X5ug.mL.CapvsEtOH..6h
• X5ug.mL.CapvsEtOH..6hA
• X5ug.mL.KCN.DMSO..6h..2
• X50ug.mL.RoxvsEtOH..6h
• X5ug.mL.TetvsEtOH..6h
• X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.y
• Tet_500ng_30M_01
• Tet_50ng_30M_01
• Tet_5ug_30M_01
• X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A