Bicluster

ID: 552f63f7b744335b89d69342
# Conditions: 125
# Genes: 21
Residual: 0.44984427674146

Bicluster Motifs

Bicluster Genes

  • Rv0187
  • Rv0267
  • Rv0389
  • Rv0413
  • Rv0649
  • Rv0650
  • Rv0787
  • Rv0817c
  • Rv0876c
  • Rv1130
  • Rv1137c
  • Rv1225c
  • Rv1273c
  • Rv1799
  • Rv1927
  • Rv2546
  • Rv2769c
  • Rv2891
  • Rv3079c
  • Rv3514
  • Rv3653

Bicluster Conditions

  • MTB.strain.1254.Ctrl.vs.high.aeration.rep1
  • MTB.strain.1254.Ctrl.vs.high.aeration.rep2
  • MTB.strain.1254.Ctrl.vs.high.aeration.rep3
  • MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.1
  • MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2
  • MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.6
  • H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1
  • H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2
  • H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3
  • H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4
  • H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5
  • H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.6
  • X20ug.ml.KCN.vs.DMSO.6hrs.x
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
  • Starvation_1254_24h_02
  • Starvation_1254_24h_03
  • Starvation_1254_24h_05
  • Starvation_1254_24h_06
  • Starvation_1254_24h_07
  • Starvation_1254_24h_08
  • Starvation_1254_5d_01
  • Starvation_1254_5d_04
  • Starvation_1254_6h_04
  • Starvation_1254_6h_06
  • Starvation_1254_6h_07
  • Starvation_1254_6h_08
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
  • H37Rv.reaeration.for.1hrs.rep.1
  • H37Rv.reaeration.for.1hrs.rep.2
  • H37Rv.reaeration.for.1hrs.rep.3
  • H37Rv.reaeration.for.1hrs.rep.4
  • H37Rv.reaeration.for.1hrs.rep.5
  • H37Rv.reaeration.for.1hrs.rep.6
  • H37Rv.reaeration.for.4hrs.rep.1
  • H37Rv.reaeration.for.4hrs.rep.2
  • H37Rv.reaeration.for.4hrs.rep.3
  • H37Rv.reaeration.for.4hrs.rep.5
  • H37Rv.reaeration.for.4hrs.rep.6
  • H37Rv.reaeration.for.4hrs.rep.7
  • H37Rv.reaeration.for.6hrs.rep.1
  • H37Rv.reaeration.for.6hrs.rep.5
  • H37Rv.reaeration.for.12hrs.rep.1
  • H37Rv.reaeration.for.24hrs.rep.2
  • H37Rv.reaeration.for.24hrs.rep.4
  • H37Rv.reaeration.for.24hrs.rep.5
  • H37Rv.reaeration.for.24hrs.rep.6
  • MTB.in.Wild.type.macrophages.for.4hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.4hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.24hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.48hrs
  • Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
  • Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
  • Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
  • Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
  • Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
  • Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
  • Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
  • WT_140mM_NaCl_Rep3
  • WT_140mM_NaCl_Rep4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.1
  • X0.1mMGSNO.10ug.mLmdvsDMSO.6h
  • X25ug.mLCPZ.0.1mMGSNO.DMSO..3
  • X10ug.mL.EconazolevsEtOH..6h
  • X10ug.mL.EconazolevsEtOH..6hA
  • X24ug.mL.Econazole.DMSO..6h..1
  • X24ug.mL.Econazole.DMSO..6h..2
  • X13ug.mL.clfzine.DMSO..6h..1
  • X13ug.mL.clfzine.DMSO..6h..2
  • X10ug.mLchlorpromazinevsctrl.6h
  • X10ug.mLchlorpromazinevsctrl.6hA
  • X20ug.mL.chlorprmz.DMSO..6h..1
  • X20ug.mL.chlorprmz.DMSO..6h..2
  • X10ug.mL.ClotrimvsEtOH..6hA
  • X10ug.mL.clotrimvsEtOH..6h
  • X24ug.mL.cltrmazole.DMS..6h..1
  • X24ug.mL.cltrmazole.DMS..6h..2
  • X24ug.mL.cltrmazole.DMS..6h..3
  • X10uM.CCCP.DMSO..6h
  • X50uM.CCCP.DMSO..6h..1
  • X50uM.CCCP.DMSO..6h..2
  • X50uM.CCCPvsDMSO..6h
  • X0.5mM.DNP.DMSO..6h
  • X1mM.DNP.DMSO..6h..1
  • X1mM.DNP.DMSO..6h..2
  • X2.5mM.Dinitrophenol.DMSO..6h
  • X20uM.DCCD.DMSO..6h..1
  • X20uM.DCCD.DMSO..6h..2
  • X100uM.DCCD.DMSO..6h
  • X2mM.DTTvsDMSO..6h
  • X2mM.DTTvsDMSO..6h.A
  • X20ug.mL.KCN.DMSO..6h
  • X6ug.mL.MenadionevsDMSO..6h
  • X10ug.mL.menadionevsDMSO..6h
  • X50uM.NigericinvsDMSO..6h
  • X50uM.NigericinvsDMSO..6h.A
  • X10ug.mL.TRZ.DMSO..6h..1
  • X25ug.mL.TRZ.DMSO..6h
  • X50ug.mL.Thioridazine.DMSO..6h
  • X0.5uMValinomycinvsDMSO.6h
  • X1uM.ValinomycinvsDMSO..6h
  • X1uM.ValinomycinvsDMSO..6h.A
  • X1uM.ValinomycinvsDMSO..6h.B
  • X0.5uMValinomycin.70mMKClvsDMSO.6h
  • X2mM.ZnSO4.DMSO..6h
  • X20ug.ml.KCN.vs.DMSO.6hrs.y
  • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1
  • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.2
  • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.1
  • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.2
  • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.1
  • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.2
  • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1
  • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.2
  • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1
  • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.2
  • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.2