Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0043c
• Rv0180c
• Rv0181c
• Rv0182c
• Rv0196
• Rv0471c
• Rv0767c
• Rv0946c
• Rv1062
• Rv1088
• Rv1206
• Rv1365c
• Rv1742
• Rv1750c
• Rv1874
• Rv1929c
• Rv1960c
• Rv1986
• Rv1988
• Rv2022c
• Rv2075c
• Rv2390c
• Rv2657c
• Rv3507
• Rv3832c
• Rv3903c

Bicluster Conditions

• MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.1
• MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.6
• High.iron.wt.vs.low.iron.wt.1a
• High.iron.wt.vs.low.iron.wt.2a
• High.iron.wt.vs.low.iron.wt.3a
• High.iron.wt.vs.low.iron.wt.3b
• H37Rv.0.2..Oxygen..2h..2
• H37Rv.0.2..Oxygen..2h..3
• H37Rv.0.2..Oxygen..2h..4
• H37Rv.0.2..Oxygen..2h..5
• H37Rv.0.2..Oxygen..2h..6
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.6
• pH4.8vspH6.8..2h.A
• pH4.8vspH6.8..5h.
• pH4.8vspH6.8..6h.
• pH5.2vspH6.8..5.5h.
• pH5.2vspH6.8..10.5h.
• pH5.6vspH6.8..4h.B
• pH5.6vspH6.8..7h.
• pH5.6vspH6.8..11h.
• pH5.6vspH6.8..16h.
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
• Starvation_1254_12h_01
• Starvation_1254_12h_03
• Starvation_1254_24h_01
• Starvation_1254_24h_02
• Starvation_1254_24h_03
• Starvation_1254_24h_06
• Starvation_1254_24h_08
• Starvation_1254_3d_02
• Starvation_1254_5d_01
• Starvation_1254_6h_01
• Starvation_1254_6h_04
• Starvation_1254_6h_06
• Starvation_1254_OA50_12h_02
• Starvation_1254_OA50_12h_03
• Starvation_1254_OA50_12h_04
• Starvation_1254_OA50_24h_01
• Starvation_1254_OA50_24h_02
• Starvation_1254_OA50_24h_03
• Starvation_1254_OA50_24h_04
• Starvation_1254_OA50_3d_01
• Starvation_1254_OA50_5d_03
• Starvation_1254_PA50_24h_01
• Starvation_1254_PA50_24h_02
• Starvation_1254_PA50_24h_03
• Starvation_1254_PA50_24h_04
• Starvation_1254_PA50_6h_01
• Starvation_1254_PA50_6h_02
• Starvation_1254_PA50_6h_03
• Starvation_1254_PA50_6h_04
• Starvation_OA50_24h_04
• Starvation_OA50_6h_04
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
• Mtb.response.to.pH.6.5..6.replicates.
• MTB.in.Wild.type.macrophages.for.4hrs
• MTB.in.Wild.type.macrophages.for.24hrs
• MTB.in.Wild.type.macrophages.for.48hrs
• MTB.in.Wild.type.macrophages...IFNg.for.4hrs
• MTB.in.Wild.type.macrophages...IFNg.for.48hrs
• Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
• Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
• Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
• Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
• Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
• Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
• Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
• Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
• Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
• Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
• Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
• X40ug.mL.5CL.pH5.6..2h..2
• X40ug.mL.5CL.pH5.6..4h..2
• X0.12mg.mL.BZA.pH5.6..4h..1
• X0.12mg.mL.Nam.pH5.6..2h..2
• X0.12mg.mL.Nam.pH5.6..4h..1
• X0.12mg.mL.Nam.pH5.6..4h..2
• X0.12mg.mL.NamvspH5.6..7h.
• X1.2mg.mL.NamvspH5.6..5h.
• X0.12mg.mL.PZA.pH5.6..2.5h.
• X0.12mg.mL.PZAvspH5.6..4h.A
• X1.2mg.mL.PZA.pH5.6..2h..
• X1.2mg.mL.PZAvspH5.6..4h.
• X1.2mg.mL.PZAvspH5.6..16h.