Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0207c
• Rv0556
• Rv0638
• Rv0863
• Rv1046c
• Rv1207
• Rv1480
• Rv1863c
• Rv1885c
• Rv2295
• Rv2534c
• Rv2535c
• Rv2588c
• Rv2861c
• Rv2903c
• Rv2967c
• Rv3044
• Rv3661
• Rv3680
• Rv3781
• Rv3883c

Bicluster Conditions

• H37Rv.0.05..SDS.exposure.for.1h.rep.1
• H37Rv.0.05..SDS.exposure.for.1h.rep.3
• H37Rv.0.05..SDS.exposure.for.1h.rep.4
• H37Rv.0.05..SDS.exposure.for.1h.rep.6
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.x
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.1
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3.x
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4.x
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.1
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.3
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.4
• H37Rv.vs..H37Rv.SDS.treated.rep.3
• H37Rv.vs..H37Rv.SDS.treated.rep.6
• X0.1mM.GSNOvsDMSO..4h
• X0.1mM.GSNOvsDMSO..6h.
• X0.1ug.mL.Mtmvsctrl..1.5h..x
• X0.2ug.mL.Mtmvsctrl..1.5h..x
• X0.2ug.mL.Mtmvsctrl..2h..x
• X0.2ug.mL.Mtmvsctrl..2h.B.x
• X0.2ug.mL.Mtmvsctrl..2h.C.x
• X0.2ug.mL.Mtmvsctrl..4h..x
• X0.2ug.mL.Mtmvsctrl..4h.B.x
• X0.2ug.mL.Mtm.ctrl..4h...2.x
• X4mM.H2O2vsctrl..1h.
• X4mM.H2O2vsctrl..2h.
• X4mM.H2O2.ctrl..2h...2
• X4mM.H2O2.ctrl..4h...1
• X4mM.H2O2.ctrl..4h...2
• X4mM.H2O2vsctrl..4h.
• X4mM.H2O2vsctrl..4h.A
• Succinate.7H9.based.medium..2
• PBS.Tween.7H9
• X25J.UV.ctrl..2h.
• X25J.UVvs.ctrl..6h.
• UV.40J.vs.ctrl.12h.1
• X60J.UV.ctrl..2h.
• X60J.UVvsctrl..6h.
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.2
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.6
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
• SDS_3h_01
• SDS_60min_01
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
• H37Rv.reaeration.for.1hrs.rep.1
• H37Rv.reaeration.for.1hrs.rep.2
• H37Rv.reaeration.for.4hrs.rep.3
• H37Rv.reaeration.for.4hrs.rep.6
• H37Rv.reaeration.for.6hrs.rep.5
• H37Rv.reaeration.for.12hrs.rep.1
• H37Rv.reaeration.for.12hrs.rep.2
• H37Rv.reaeration.for.12hrs.rep.3
• H37Rv.reaeration.for.12hrs.rep.4
• H37Rv.reaeration.for.12hrs.rep.5
• H37Rv.reaeration.for.12hrs.rep.6
• H37Rv.reaeration.for.24hrs.rep.5
• BCG.2hr.phagosomal.profile
• BCG.24hr.phagosomal.profile
• M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
• MTB.in.Wild.type.macrophages.for.24hrs
• MTB.in.Wild.type.macrophages.for.48hrs
• MTB.in.Wild.type.macrophages...IFNg.for.4hrs
• MTB.in.Wild.type.macrophages...IFNg.for.24hrs
• MTB.in.Wild.type.macrophages...IFNg.for.48hrs
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2.y
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.5
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.6
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.7
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.1
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.2
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.3
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.6
• MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.1
• MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.3
• MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.4
• MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.5
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.1
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.2
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.5
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.6
• Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
• Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
• Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
• Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
• Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
• Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
• MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.2
• X20ug.mL.Procept6776vsDMSO..6h
• X20ug.mL.Prcp.6778.DMSO..6h..2
• X40ug.mLProcept6778vsDMSO.6h
• X40ug.mLProcept6778vsDMSO.6hA
• X10ug.mL.PA.1vsDMSO..6h
• X10ug.mL.PA.1vsDMSO..6hA
• X10ug.mL.PA.1vsDMSO..6hB
• X10ug.mL.PA.21vsDMSO..6h
• X10ug.mL.PA.21vsDMSO..6hA
• X50ug.mL.PA.21vsDMSO..6h
• X50ug.mL.PA.21vsDMSO..6hA
• X0.4ug.mL.PA824.DMSO..6h..1
• X0.4ug.mL.PA824.DMSO..6h..2
• X0.4ug.mL.PA824.DMSO..6h..3
• X2ug.mL.PA824.DMSO..6h..2
• X0.1mMGSNO.10ug.mLmdvsDMSO.6hA
• X0.1mMGSNO.20ug.mLCPZvsDMSO.6hA
• X25ug.mLCPZ.0.1mMGSNO.DMSO..1
• X25ug.mLCPZ.0.1mMGSNO.DMSO..2
• X25ug.mLCPZ.0.1mMGSNO.DMSO..3
• X25ug.mLCPZ.0.1mMGSNOvsDMSO.A
• X5ug.mL.CFZ.0.1mM.GSNO.DMSO..1
• X5ug.mL.CFZ.0.1mM.GSNO.DMSO..2
• X0.1ug.mL.Mtmvsctrl..0.75h..y
• X0.2ug.mL.Mtmvsctrl..2h..y
• X0.2ug.mL.Mtmvsctrl..2h.C.y
• X0.2ug.mL.Mtmvsctrl..4h.B.y
• X0.2ug.mL.Mtm.ctrl..4h...1.y
• X0.2ug.mL.Mtmvsctrl..6h..y
• X10ug.mL.EconazolevsEtOH..6h
• X10ug.mL.EconazolevsEtOH..6hA
• X24ug.mL.Econazole.DMSO..6h..1
• X24ug.mL.Econazole.DMSO..6h..2
• X12.5ug.mL.AntimycinvsDMSO..6h
• X25ug.mL.AntimycinvsDMSO..6h
• X50ug.mLAntimycinAvsDMSO..6h
• X50ug.mLAntimycinAvsDMSO..6hA
• X50ug.mLAntimycinAvsDMSO..6hB
• X10ug.mL.clofazimine.DMSO..6h
• X13ug.mL.clfzine.DMSO..6h..1
• X13ug.mL.clfzine.DMSO..6h..2
• X10ug.mL.ChlorprovsEtOH
• X10ug.mL.ChlorprovsEtOH..6h
• X20ug.mL.chlorprmz.DMSO..6h..1
• X25ug.mL.CPZvsDMSO..6h.A
• X25ug.mL.CPZvsDMSO..6h.B
• X60ug.mL.ChlorprovsEtOH..6h
• X10ug.mL.clotrimvsEtOH..6h
• X24ug.mL.cltrmazole.DMS..6h..2
• X0.5mM.DNP.DMSO..6h
• X20uM.DCCD.DMSO..6h..2
• X6ug.mL.MenadionevsDMSO..6h
• X10ug.mL.menadionevsDMSO..6h
• X10ug.mLmdn.0.1mMGSNO.DMSO..2
• X10ug.mLMethoxatinvsDMSO.6h
• X10ug.mL.Nvb.DMSO..6h..2
• X10ug.mL.Nvb.DMSO..6h..3
• X10ug.mL.TRZ.DMSO..6h..1
• X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.1
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.1
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.2
• MTB.at.T30..biological.rep1
• MTB.at.T30..biological.rep3
• MTB.at.T60..biological.rep2
• MTB.at.T180..biological.rep2
• MTB.at.T180..biological.rep3
• MTB.at.T360..biological.rep1
• MTB.at.T360..biological.rep2
• MTB.at.T360..biological.rep3