Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0021c
• Rv0091
• Rv0225
• Rv0357c
• Rv0402c
• Rv0778
• Rv0783c
• Rv0890c
• Rv0929
• Rv0945
• Rv1017c
• Rv1171
• Rv1281c
• Rv1337
• Rv1444c
• Rv1445c
• Rv1524
• Rv1546
• Rv1708
• Rv2257c
• Rv2361c
• Rv2608
• Rv2673
• Rv2806
• Rv2915c
• Rv3372
• Rv3579c

Bicluster Conditions

• MTB.strain.1254.Ctrl.vs.high.aeration.rep1
• MTB.strain.1254.Ctrl.vs.high.aeration.rep2
• MTB.strain.1254.Ctrl.vs.high.aeration.rep3
• PBS.Tween.7H9
• PBS.Tw.DMSOvs7H9..6h
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
• AA_10uM_10.min_01
• AA_30uM_10.min_05
• AA_30uM_10.min_06
• AA_30uM_10.min_07
• AA_30uM_10min_03
• AA_30uM_1h_06
• AA_30uM_1h_07
• AA_30uM_24h_02
• AA_30uM_24h_03
• AA_30uM_24h_04
• AA_30uM_2h_01
• AA_30uM_2h_04
• AA_30uM_2h_05
• AA_30uM_2h_07
• AA_30uM_2h_09
• AA_30uM_30min_03
• AA_30uM_30min_05
• AA_30uM_30min_07
• AA_30uM_30min_08
• AA_30uM_30min_09
• AA_30uM_4h_01
• AA_30uM_4h_02
• AA_30uM_4h_03
• AA_30uM_4h_05
• AA_30uM_4h_08
• AA_3uM_10.min_01
• AA_60uM_24h_01
• AA_60uM_24h_02
• AA_60uM_24h_03
• Glucose_5mM_10min_01
• Glycerol_1._30M_01
• L2A_30uM_10min_01
• L2A_30uM_10min_04
• L2A_30uM_10min_05
• L2A_30uM_10min_06
• L2A_30uM_1h_03
• L2A_30uM_1h_07
• L2A_30uM_2h_01
• L2A_30uM_2h_05
• L2A_30uM_4h_04
• L2A_30uM_4h_05
• L2A_30uM_4h_06
• L2A_30uM_4h_08
• OA_50uM_10min_01
• OA_50uM_10min_03
• OA_50uM_10min_08
• OA_50uM_1h_01
• OA_50uM_1h_03
• OA_50uM_1h_05
• OA_50uM_1h_06
• OA_50uM_1h_08
• OA_50uM_24h_01
• OA_50uM_24h_02
• OA_50uM_24h_03
• OA_50uM_24h_04
• OA_50uM_24h_05
• OA_50uM_24h_06
• OA_50uM_2h_01
• OA_50uM_2h_02
• OA_50uM_2h_04
• OA_50uM_2h_05
• OA_50uM_2h_07
• OA_50uM_2h_08
• OA_50uM_2h_09
• OA_50uM_2h_10
• OA_50uM_30min_01
• OA_50uM_30min_03
• OA_50uM_30min_06
• OA_50uM_30min_09
• OA_50uM_4h_01
• OA_50uM_4h_03
• OA_50uM_4h_06
• OA_50uM_4h_07
• OA_50uM_4h_08
• OA_50uM_4h_09
• PA_100uM_2h_03
• PA_10uM_10min_02
• PA_50uM_10.min_02
• PA_50uM_10.min_03
• PA_50uM_10min_01
• PA_50uM_10min_05
• PA_50uM_10min_06
• PA_50uM_10min_07
• PA_50uM_10min_08
• PA_50uM_10min_10
• PA_50uM_1h_01
• PA_50uM_1h_02
• PA_50uM_1h_03
• PA_50uM_1h_06
• PA_50uM_1h_07
• PA_50uM_1h_11
• PA_50uM_1h_12
• PA_50uM_24h_02
• PA_50uM_24h_03
• PA_50uM_24h_04
• PA_50uM_24h_06
• PA_50uM_24h_09
• PA_50uM_24h_10
• PA_50uM_2h_01
• PA_50uM_2h_06
• PA_50uM_2h_08
• PA_50uM_30.min_06
• PA_50uM_30.min_07
• PA_50uM_30min_02
• PA_50uM_30min_03
• PA_50uM_30min_08
• PA_50uM_30min_09
• PA_50uM_30min_10
• PA_50uM_30min_11
• PA_50uM_3d_01
• PA_50uM_3d_03
• PA_50uM_3d_04
• PA_50uM_3d_05
• PA_50uM_3d_06
• PA_50uM_4h_06
• PA_50uM_8h_04
• Starvation_1254_12h_01
• Starvation_1254_12h_02
• Starvation_1254_12h_03
• Starvation_1254_24h_01
• Starvation_1254_24h_02
• Starvation_1254_24h_03
• Starvation_1254_24h_06
• Starvation_1254_3d_01
• Starvation_1254_3d_02
• Starvation_1254_3d_04
• Starvation_1254_5d_02
• Starvation_1254_5d_04
• Starvation_1254_6h_01
• Starvation_1254_6h_03
• Starvation_1254_6h_05
• Starvation_1254_6h_06
• Starvation_1254_OA50_12h_01
• Starvation_1254_OA50_24h_01
• Starvation_1254_OA50_5d_01
• Starvation_1254_OA50_5d_02
• Starvation_1254_OA50_6h_01
• Starvation_1254_OA50_6h_02
• Starvation_1254_OA50_6h_03
• Starvation_1254_OA50_6h_04
• Starvation_1254_PA50_24h_01
• Starvation_1254_PA50_6h_02
• Starvation_OA50_24h_02
• Starvation_OA50_24h_03
• Starvation_OA50_24h_04
• Starvation_OA50_6h_03
• Starvation_OA50_6h_04
• H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1
• H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.2
• H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
• H37Rv.reaeration.for.1hrs.rep.1
• H37Rv.reaeration.for.1hrs.rep.3
• H37Rv.reaeration.for.4hrs.rep.1
• H37Rv.reaeration.for.4hrs.rep.2
• H37Rv.reaeration.for.4hrs.rep.4
• H37Rv.reaeration.for.4hrs.rep.7
• H37Rv.reaeration.for.6hrs.rep.1
• H37Rv.reaeration.for.6hrs.rep.2
• H37Rv.reaeration.for.6hrs.rep.4
• H37Rv.reaeration.for.12hrs.rep.1
• H37Rv.reaeration.for.12hrs.rep.2
• H37Rv.reaeration.for.12hrs.rep.6
• H37Rv.reaeration.for.24hrs.rep.1
• H37Rv.reaeration.for.24hrs.rep.2
• H37Rv.reaeration.for.24hrs.rep.6
• BCG.24hr.phagosomal.profile
• MTB.in.Wild.type.macrophages.for.4hrs
• MTB.in.Wild.type.macrophages.for.24hrs
• MTB.in.Wild.type.macrophages.for.48hrs
• MTB.in.Wild.type.macrophages...IFNg.for.4hrs
• MTB.in.Wild.type.macrophages...IFNg.for.24hrs
• Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
• Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
• Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
• Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
• Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
• Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
• Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
• Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
• X0.2ug.mL.RifvsDMSO..6h
• X0.2ug.mL.RifvsDMSO..6hA
• Rif.0.5ug.mL.vsDMSO.2.5h
• Rif.0.5ug.mL.vsDMSO.2.5hA
• Rif.5ug.mL.vsDMSO.2.5h
• Rif.5ug.mL.vsDMSO.2.5hA
• X0.5ug.mLRifapentinevsEtOH.6h
• X0.5ug.mLRifapentinevsEtOH.6hA
• H37Rv.Ctrl.vs.10.ug.ml.garlic.extract.6hrs
• X5ug.ml.Rifampicin.vs.DMSO.2.5hrs