Bicluster – MTB EGRIN 2.0

ID: 552fa146b744335b89d7e1ce
# Conditions: 115
# Genes: 29
Residual: 0.51729253130193

Bicluster Motifs

Bicluster Genes

Rv0046c
Rv0241c
Rv0251c
Rv0359
Rv0477
Rv1077
Rv1079
Rv1084
Rv1257c
Rv1258c
Rv1299
Rv2178c
Rv2221c
Rv2525c
Rv2564
Rv2566
Rv2875
Rv2905
Rv2906c
Rv2921c
Rv2926c
Rv3045
Rv3106
Rv3128c
Rv3385c
Rv3386
Rv3423c
Rv3712
Rv3839

Bicluster Conditions

H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
BCG.24hr.phagosomal.profile
M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
Russell_Lab_Spotted_Oligos_1.2..14.day.resting.macrophage.infection.2hr..rep.2..Russell_Lab_Spotted_Oligos_1.2..
Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.3
MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.4
MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4
MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.1
MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.2
MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.3
MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.4
MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.1
MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.3
MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.4
MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.1
MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.2
MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.3
MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.4
MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.1
MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.2
MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.3
MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1
MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3
MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.4
MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.1
MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3
MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4
MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.1
MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.2
MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.3
MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.4
MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.1
MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.2
MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.4
MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.5
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.2
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.4
MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.1
MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.2
MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.3
MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.1
MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.2
MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.3
MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.4
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.1
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.2
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.3
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.1
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.3
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4
MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1
MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.3
MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.3
MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.4
MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1
MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.4
MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.2
MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.4
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.1
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.3
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.1
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.2
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.3
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.4
X5ug.mL.CapvsEtOH..6h
X5ug.mL.CapvsEtOH..6hA
X10ug.mL.CapvsEtOH..6h
X10ug.mL.capreomycinvsEtOH..6h
X30ug.mL.RoxvsEtOH..6hA
X2ug.mL.SMvsEtOH..6h
X2ug.mL.SMvsEtOH..6hA
X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.y
X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A

Column members cluster 552fa146b744335b89d7e1ce Species (TODO)

H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
BCG.24hr.phagosomal.profile
M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
Russell_Lab_Spotted_Oligos_1.2..14.day.resting.macrophage.infection.2hr..rep.2..Russell_Lab_Spotted_Oligos_1.2..
Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.3
MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.4
MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4
MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.1
MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.2
MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.3
MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.4
MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.1
MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.3
MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.4
MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.1
MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.2
MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.3
MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.4
MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.1
MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.2
MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.3
MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1
MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3
MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.4
MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.1
MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3
MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4
MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.1
MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.2
MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.3
MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.4
MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.1
MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.2
MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.4
MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.5
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.2
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.4
MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.1
MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.2
MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.3
MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.1
MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.2
MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.3
MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.4
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.1
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.2
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.3
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.1
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.3
MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4
MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1
MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.3
MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.3
MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.4
MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1
MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.4
MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.2
MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.4
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.1
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.3
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.1
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.2
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.3
MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.4
X5ug.mL.CapvsEtOH..6h
X5ug.mL.CapvsEtOH..6hA
X10ug.mL.CapvsEtOH..6h
X10ug.mL.capreomycinvsEtOH..6h
X30ug.mL.RoxvsEtOH..6hA
X2ug.mL.SMvsEtOH..6h
X2ug.mL.SMvsEtOH..6hA
X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.y
X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A