Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0788
• Rv1326c
• Rv1596
• Rv1782
• Rv1783
• Rv2194
• Rv2537c
• Rv2553c
• Rv2554c
• Rv2583c
• Rv2587c
• Rv2753c
• Rv2881c
• Rv2883c
• Rv2916c
• Rv3104c
• Rv3105c
• Rv3843c

Bicluster Conditions

• H37Rv..7H9.roll.replicate.1.x
• H37Rv..7H9.roll.replicate.2.x
• H37Rv..7H9.roll.replicate.3.x
• H37Rv..7H9.roll.replicate.4.x
• H37Rv..7H9.shake.replicate.1
• H37Rv..7H9.shake.replicate.2
• H37Rv..7H9.shake.replicate.3
• H37Rv..Dubos.media.replicate.2
• H37Rv..Dubos.media.replicate.3
• H37Rv..Dubos.media.replicate.4
• H37Rv..Sauton.s.media.replicate.1
• H37Rv..Sauton.s.media.replicate.4
• H37Rv..Youman.media.replicate.1
• H37Rv..Youman.media.replicate.4
• H37Rv..7H9.roll.replicate.1.y
• H37Rv..7H9.roll.replicate.2.y
• H37Rv..7H9.roll.replicate.3.y
• H37Rv..7H9.roll.replicate.4.y
• Strain.CDC1551..replicate.1
• Strain.CDC1551..replicate.4
• Strain.1006...replicate.3
• Strain.1006...replicate.4
• Strain.1254...replicate.4
• Strain.1254...replicate.2
• Strain.1843..replicate.1
• Strain.1843...replicate.2
• Strain.1843...replicate.3
• Strain.3160..replicate.1
• Strain.9700665..replicate.1
• Strain.9700665..replicate.2
• Strain.9700665..replicate.3
• Strain.9800608..replicate.1
• Strain.9800608..replicate.4
• Strain.9802826..replicate.1
• Strain.9802826..replicate.2
• Strain.9802826..replicate.3
• Strain.9802826..replicate.4
• Strain.M3061a..replicate.4
• H37Rv.Vs.M.bovis.rep1
• H37Rv.Vs.M.bovis.rep4
• MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.1
• MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2
• MTB1254.Day.0.rep.2
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.2
• MTB1254.vs..MTB1254.rep1
• MTB1254.vs..MTB1254.rep4
• MTB1254.vs..MTB1254.rep5
• MTB1254.vs..MTB1254.rep6
• H37Rv.0.2..Oxygen..2h..3
• H37Rv.0.2..Oxygen..2h..4
• H37Rv.Day.0.rep.3
• H37Rv.Day6.2
• H37Rv.Day8.1
• H37Rv.Day8.2
• H37Rv.Day14.2
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3
• H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
• H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
• Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
• Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
• Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
• Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
• Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
• Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
• Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
• Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
• Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
• H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2
• H37Rv.wild.type.Vs.H37Rv.wild.type.rep.3
• H37Rv.wild.type.Vs.H37Rv.wild.type.rep.4
• Whole.Lung.Surfactant.2hrs.rep.1
• Whole.Lung.Surfactant.2hrs.rep.2
• Whole.Lung.Surfactant.2hrs.rep.3
• Whole.Lung.Surfactant.30min.rep.1
• Whole.Lung.Surfactant.30min.rep.2
• Whole.Lung.Surfactant.30min.rep.3
• Whole.Lung.Surfactant.30min.rep.5
• Extracted.Lung.Surfactant.2hrs.rep.1
• Extracted.Lung.Surfactant.2hrs.rep.2
• Extracted.Lung.Surfactant.30min.rep.1
• Extracted.Lung.Surfactant.30min.rep.2
• Extracted.Lung.Surfactant.30min.rep.3
• Extracted.Lung.Surfactant.30min.rep.4
• Purified.Surfactant.Lipids.2hrs.rep.1
• Purified.Surfactant.Lipids.30min.rep.1
• Purified.Surfactant.Lipids.30min.rep.2
• Purified.Human.SP.A.Coated.2hrs.rep1
• Purified.Human.SP.A.Uncoated.2hrs.rep1
• Purified.Human.SP.A.Uncoated.2hrs.rep2
• Purified.Human.SP.A.Uncoated.2hrs.rep3
• AA_30uM_10.min_05
• AA_30uM_10.min_07
• AA_30uM_1h_07
• AA_30uM_1h_08
• AA_30uM_24h_04
• AA_30uM_2h_09
• AA_30uM_30min_02
• AA_30uM_30min_03
• AA_30uM_4h_02
• AA_30uM_4h_03
• AA_30uM_4h_04
• AA_30uM_4h_05
• AA_30uM_4h_07
• AA_30uM_4h_08
• AA_30uM_4h_09
• AA_60uM_24h_02
• AA_60uM_24h_03
• L2A_30uM_10min_01
• L2A_30uM_10min_03
• L2A_30uM_10min_06
• L2A_30uM_10min_07
• L2A_30uM_10min_08
• L2A_30uM_1h_01
• L2A_30uM_1h_05
• L2A_30uM_1h_09
• L2A_30uM_2h_03
• L2A_30uM_2h_05
• L2A_30uM_30min_05
• L2A_30uM_30min_07
• L2A_30uM_4h_04
• L2A_30uM_4h_05
• L2A_30uM_4h_06
• L2A_30uM_4h_08
• LAA_50uM_10min_01
• OA_50uM_10min_02
• OA_50uM_10min_05
• OA_50uM_1h_01
• OA_50uM_1h_06
• OA_50uM_24h_03
• OA_50uM_24h_05
• OA_50uM_24h_06
• OA_50uM_2h_01
• OA_50uM_2h_02
• OA_50uM_2h_03
• OA_50uM_2h_05
• OA_50uM_2h_06
• OA_50uM_2h_08
• OA_50uM_2h_10
• OA_50uM_30min_02
• OA_50uM_30min_05
• OA_50uM_30min_08
• OA_50uM_4h_05
• OA_50uM_4h_08
• OA_50uM_4h_09
• PA_10uM_10.min_01
• PA_50uM_10.min_02
• PA_50uM_10min_01
• PA_50uM_10min_04
• PA_50uM_10min_08
• PA_50uM_10min_10
• PA_50uM_12h_01
• PA_50uM_12h_06
• PA_50uM_1h_05
• PA_50uM_24h_06
• PA_50uM_24h_10
• PA_50uM_2h_01
• PA_50uM_2h_03
• PA_50uM_2h_04
• PA_50uM_2h_07
• PA_50uM_30.min_04
• PA_50uM_30.min_05
• PA_50uM_30.min_06
• PA_50uM_30min_08
• PA_50uM_4h
• PA_50uM_4h_01
• PA_50uM_4h_07
• PA_50uM_8h_02
• PA_50uM_8h_04
• CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.3
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.1
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.2
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.4
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.5
• CDC1551.ctrl.vs.ctrl.at.0.hr.rep.2
• SS_A1_RV.1
• SS_A1_RV.2
• WT_140mM_NaCl_Rep2
• WT_140mM_NaCl_Rep3
• wild.type..mc.2.6020...biological.rep2
• hip.mutant.KL2801..biological.rep1
• hip.mutant.KL2801..biological.rep2
• hip.mutant.KL2825..biological.rep1
• hip.mutant.KL2825..biological.rep2
• hip.mutant.KL2849..biological.rep1
• hip.mutant.KL2849..biological.rep2
• hip.mutant.HTS1090..biological.rep1
• hip.mutant.HTS1090..biological.rep2
• hip.mutant.HTS1105..biological.rep1
• hip.mutant.HTS1105..biological.rep2
• hip.mutant.HT1116..biological.rep1
• hip.mutant.HT1116..biological.rep2
• hip.mutant.HT1117..biological.rep1
• hip.mutant.HT1117..biological.rep2
• hip.mutant.HT1120..biological.rep1
• hip.mutant.HT1130..biological.rep1
• hip.mutant.HT1130..biological.rep2
• hip.mutant.HT1134..biological.rep1
• hip.mutant.HT1134..biological.rep2
• hip.mutant.HT1137..biological.rep1
• hip.mutant.HT1137..biological.rep2
• hip.mutant.HT1170..biological.rep2