Bicluster


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Call Stack
#TimeMemoryFunctionLocation
10.0000398432{main}( ).../index.php:0
20.0001398712require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.11907193344require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.12177197088include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.18557717848get_template_part( ).../page.php:28
60.18567718424locate_template( ).../general-template.php:206
70.18567718552load_template( ).../template.php:720
80.18567718864require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.18647736040the_content( ).../content-page.php:22
100.18657736288apply_filters( ).../post-template.php:256
110.18657736688WP_Hook->apply_filters( ).../plugin.php:205
120.18757742216do_shortcode( ).../class-wp-hook.php:310
130.18767748272preg_replace_callback ( ).../shortcodes.php:273
140.18767748896do_shortcode_tag( ).../shortcodes.php:273
150.18767748896bicluster_info_shortcode( ).../shortcodes.php:433
160.18767749096file_get_contents ( ).../short_codes.php:666

( ! ) Notice: Trying to get property 'bicluster' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 667
Call Stack
#TimeMemoryFunctionLocation
10.0000398432{main}( ).../index.php:0
20.0001398712require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.11907193344require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.12177197088include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.18557717848get_template_part( ).../page.php:28
60.18567718424locate_template( ).../general-template.php:206
70.18567718552load_template( ).../template.php:720
80.18567718864require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.18647736040the_content( ).../content-page.php:22
100.18657736288apply_filters( ).../post-template.php:256
110.18657736688WP_Hook->apply_filters( ).../plugin.php:205
120.18757742216do_shortcode( ).../class-wp-hook.php:310
130.18767748272preg_replace_callback ( ).../shortcodes.php:273
140.18767748896do_shortcode_tag( ).../shortcodes.php:273
150.18767748896bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'id' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 669
Call Stack
#TimeMemoryFunctionLocation
10.0000398432{main}( ).../index.php:0
20.0001398712require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.11907193344require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.12177197088include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.18557717848get_template_part( ).../page.php:28
60.18567718424locate_template( ).../general-template.php:206
70.18567718552load_template( ).../template.php:720
80.18567718864require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.18647736040the_content( ).../content-page.php:22
100.18657736288apply_filters( ).../post-template.php:256
110.18657736688WP_Hook->apply_filters( ).../plugin.php:205
120.18757742216do_shortcode( ).../class-wp-hook.php:310
130.18767748272preg_replace_callback ( ).../shortcodes.php:273
140.18767748896do_shortcode_tag( ).../shortcodes.php:273
150.18767748896bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_conditions' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 670
Call Stack
#TimeMemoryFunctionLocation
10.0000398432{main}( ).../index.php:0
20.0001398712require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.11907193344require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.12177197088include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.18557717848get_template_part( ).../page.php:28
60.18567718424locate_template( ).../general-template.php:206
70.18567718552load_template( ).../template.php:720
80.18567718864require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.18647736040the_content( ).../content-page.php:22
100.18657736288apply_filters( ).../post-template.php:256
110.18657736688WP_Hook->apply_filters( ).../plugin.php:205
120.18757742216do_shortcode( ).../class-wp-hook.php:310
130.18767748272preg_replace_callback ( ).../shortcodes.php:273
140.18767748896do_shortcode_tag( ).../shortcodes.php:273
150.18767748896bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 671
Call Stack
#TimeMemoryFunctionLocation
10.0000398432{main}( ).../index.php:0
20.0001398712require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.11907193344require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.12177197088include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.18557717848get_template_part( ).../page.php:28
60.18567718424locate_template( ).../general-template.php:206
70.18567718552load_template( ).../template.php:720
80.18567718864require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.18647736040the_content( ).../content-page.php:22
100.18657736288apply_filters( ).../post-template.php:256
110.18657736688WP_Hook->apply_filters( ).../plugin.php:205
120.18757742216do_shortcode( ).../class-wp-hook.php:310
130.18767748272preg_replace_callback ( ).../shortcodes.php:273
140.18767748896do_shortcode_tag( ).../shortcodes.php:273
150.18767748896bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'residual' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 672
Call Stack
#TimeMemoryFunctionLocation
10.0000398432{main}( ).../index.php:0
20.0001398712require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.11907193344require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.12177197088include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.18557717848get_template_part( ).../page.php:28
60.18567718424locate_template( ).../general-template.php:206
70.18567718552load_template( ).../template.php:720
80.18567718864require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.18647736040the_content( ).../content-page.php:22
100.18657736288apply_filters( ).../post-template.php:256
110.18657736688WP_Hook->apply_filters( ).../plugin.php:205
120.18757742216do_shortcode( ).../class-wp-hook.php:310
130.18767748272preg_replace_callback ( ).../shortcodes.php:273
140.18767748896do_shortcode_tag( ).../shortcodes.php:273
150.18767748896bicluster_info_shortcode( ).../shortcodes.php:433
ID:
# Conditions:
# Genes:
Residual:

Bicluster Motifs

Bicluster Genes

  • Rv0135c
  • Rv0196
  • Rv0197
  • Rv0244c
  • Rv0271c
  • Rv0559c
  • Rv0983
  • Rv1001
  • Rv1128c
  • Rv1142c
  • Rv1156
  • Rv1493
  • Rv1947
  • Rv2280
  • Rv2436
  • Rv2669
  • Rv2806
  • Rv3084
  • Rv3110
  • Rv3204
  • Rv3385c
  • Rv3429
  • Rv3596c
  • Rv3855
  • Rv3878

Bicluster Conditions

  • X0.2ug.mL.Mtmvsctrl..4h.A.x
  • X0.2ug.mL.Mtmvsctrl..6h..x
  • X1ug.mL..59vsDMSO..6h
  • X1ug.mL..59vsDMSO..6hA
  • X1ug.mL..109vsDMSO..6h
  • X1ug.mL..109vsDMSO..6hA
  • X.109..0.1ug.mL..vs.DMSO..12h..GEO.acc.GSM28050.
  • X.109..1ug.mL..vs.DMSO..12h..replicate.1..GEO.ac.GSM28051.
  • X.109..1ug.mL..vs.DMSO..12h..replicate.2..GEO.acc.GSM28052.
  • X.109..10ug.mL..vs.DMSO..12h..replicate.1..GEO.acc..GSM28053.
  • X1ug.mL..241vsDMSO..6h
  • X1ug.mL..241vsDMSO..6hA
  • X10ug.mL..241vsDMSO..6h
  • X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046.
  • X.241..1ug.mL..DMSO..12h..1
  • X40ug.mL.5CL.pH5.6..2h..1
  • X40ug.mL.5CL.pH5.6..2h..2
  • X40ug.mL.5CL.pH5.6..4h..1
  • X40ug.mL.5CL.pH5.6..4h..2
  • X80ug.mL.5CL.pH5.6..2h.
  • X0.12mg.mL.BZA.pH5.6..2h.
  • X0.12mg.mL.BZA.pH5.6..4h..1
  • X0.12mg.mL.BZA.pH5.6..4h..2
  • X0.12mg.mL.BZAvspH5.6..5h.
  • X0.12mg.mL.BZAvspH5.6..7h.
  • X0.12mg.mL.Nam.pH5.6..2h..1
  • X0.12mg.mL.Nam.pH5.6..2h..2
  • X0.12mg.mL.Nam.pH5.6..4h..1
  • X0.12mg.mL.Nam.pH5.6..4h..2
  • X0.12mg.mL.NamvspH5.6..5.5h.
  • X1.2mg.mL.NamvspH5.6..10.5h.
  • X0.12mg.mL.PZA.pH5.6..2h.
  • X0.12mg.mL.PZA.pH5.6..4h..1
  • X0.12mg.mL.PZA.pH5.6..4h..2
  • X0.12mg.mL.PZAvspH5.6..4h.
  • X0.12mg.mL.PZAvspH5.6..4h.A
  • X0.12mg.mL.PZA.pH5.6..5h.
  • X0.12mg.mL.PZAvspH5.6..5.5h.
  • X0.12mg.mL.PZAvspH5.6..6h.
  • X0.12mg.mL.PZAvspH5.6..6h.A
  • X0.12mg.mL.PZAvspH5.6..10.5h.
  • X0.12mg.mL.PZAvspH5.6..11h.
  • X1.2mg.mL.PZA.pH5.6..2h..
  • X1.2mg.mL.PZAvspH5.6..4h.
  • X1.2mg.mL.PZAvspH5.6..4h.A
  • X1.2mg.mL.PZAvspH5.6..4h.B
  • X1.2mg.mL.PZA.pH5.6..5h.
  • X1.2mg.mL.PZAvspH5.6..6h.
  • X1.2mg.mL.PZAvspH5.6..6h.A
  • X1.2mg.mL.PZAvspH5.6..7h.
  • X1.2mg.mL.PZAvspH5.6..7h.A
  • X1.2mg.mL.PZAvspH5.6..10.5h.
  • X1.2mg.mL.PZAvspH5.6..16h.
  • DIPED.5ug.mL.vs.DMSO.12h.1
  • DIPED.5ug.mL.vs.DMSO.12h.2
  • DIPED.10ug.mL.vs.DMSO.12h.2
  • DIPED..100ug.mL..DMSO..12h..3
  • X0.1ug.mL.Mtmvsctrl..1.5h..y
  • X0.2ug.mL.Mtm.ctrl..4h...1.y
  • X0.2ug.mL.Mtm.ctrl..4h...2.y
  • X0.1mg.mL.TriclosanvsEtOH..6hA
  • X0.1mg.mLTriclosanvsEtOH.6hB
  • X0.1mg.mLTriclosanvsEtOH.6hC
  • X10ug.mL.TriclosanvsDMSO..6hB
  • X10ug.mL.TriclosanvsDMSO..6hC
  • X50ug.mL.Triclosan.DMSO..6h
  • X50ug.mL.TriclosanvsEtOH..6h
  • X50ug.mL.TriclosanvsEtOH..6hA
  • X100ug.mL.TriclosanvsEtOH..6h
  • X10ug.mL.EMBvsDMSO..6h
  • X10ug.mL.EMBvsDMSO..6hA
  • EMB.10ug.mL.vs.DMSO.12h.2
  • EMB.10ug.mL.vs.DMSO.12h.3
  • EMB.10ug.mL.vs.DMSO.12h.4
  • X20ug.mL.ethambutol.DMSO
  • X0.2mg.mL.AmpvsEtOH..6h
  • X0.2mg.mL.AmpvsEtOH..6hB
  • X0.2mg.mL.AmpvsEtOH..6hC
  • X0.32ug.mL.CervsEtOH..6h
  • X0.32ug.mL.CervsEtOH..6hA
  • X0.5ug.mL.CervsEtOH..6hA
  • X20ug.mL.Cephalexin.Ctrl..6h..1
  • X20ug.mL.Cephalexin.Ctrl..6h..2
  • X100ug.mL.Ceph.DMSO..6h
  • X100ug.mLCephalexinvsEtOH.6h
  • X100ug.mLCephalexinvsEtOH.6hA
  • X12ug.mLEthionamidevsEtOH.6h
  • X10ug.mL.Nvb.DMSO..6h..1
  • X10ug.mL.Nvb.DMSO..6h..2
  • X10ug.mL.Nvb.DMSO..6h..3
  • X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.x
  • X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.1
  • X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.2
  • MTB1254.3524.2._INH_20MIN
  • MTB1254_INH_20MIN
  • X0.2mg.ml.Ampicillin.vs.Ethanol.6hrs
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.1
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.2
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.3
  • H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
  • H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
  • H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
  • H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
  • H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
  • H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
  • H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.1
  • H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.2
  • H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.1
  • H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.2
  • H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.1
  • H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.2