Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0042c
• Rv0138
• Rv0229c
• Rv0254c
• Rv0688
• Rv0743c
• Rv0744c
• Rv1104
• Rv1358
• Rv1506c
• Rv1510
• Rv1724c
• Rv1745c
• Rv1832
• Rv1914c
• Rv2173
• Rv2174
• Rv2544
• Rv2598
• Rv2616
• Rv3398c

Bicluster Conditions

• High.iron.wt.vs.low.iron.wt.1a
• High.iron.wt.vs.low.iron.wt.2a
• Whole.Lung.Surfactant.2hrs.rep.3
• Whole.Lung.Surfactant.30min.rep.1
• Whole.Lung.Surfactant.30min.rep.2
• Whole.Lung.Surfactant.30min.rep.4
• Whole.Lung.Surfactant.30min.rep.5
• Extracted.Lung.Surfactant.2hrs.rep.2
• Extracted.Lung.Surfactant.30min.rep.1
• Extracted.Lung.Surfactant.30min.rep.2
• Extracted.Lung.Surfactant.30min.rep.3
• Purified.Surfactant.Lipids.2hrs.rep.2
• Purified.Surfactant.Lipids.30min.rep.2
• Purified.Human.SP.A.Coated.2hrs.rep2
• Purified.Human.SP.A.Uncoated.2hrs.rep1
• Purified.Human.SP.A.Uncoated.2hrs.rep3
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
• AA_10uM_10min_01
• AA_30uM_10.min_06
• AA_30uM_10.min_07
• AA_30uM_10m_01
• AA_30uM_10min_03
• AA_30uM_1h_05
• AA_30uM_1h_06
• AA_30uM_1h_07
• AA_30uM_24h_03
• AA_30uM_24h_04
• AA_30uM_2h_01
• AA_30uM_2h_04
• AA_30uM_2h_08
• AA_30uM_2h_09
• AA_30uM_30min_01
• AA_30uM_30min_02
• AA_30uM_30min_06
• AA_30uM_30min_07
• AA_30uM_30min_09
• AA_30uM_4h_02
• AA_30uM_4h_04
• AA_30uM_4h_09
• AA_3uM_10.min_01
• AA_3uM_10min_02
• AA_60uM_24h_02
• AA_60uM_24h_03
• L2A_30uM_10min_01
• L2A_30uM_10min_02
• L2A_30uM_10min_03
• L2A_30uM_10min_04
• L2A_30uM_10min_05
• L2A_30uM_10min_07
• L2A_30uM_1h_01
• L2A_30uM_30min_04
• L2A_30uM_4h_05
• L2A_30uM_4h_07
• L2A_30uM_4h_08
• LAA_50uM_10min_02
• OA_50uM_10min_01
• OA_50uM_10min_04
• OA_50uM_10min_05
• OA_50uM_10min_07
• OA_50uM_10min_08
• OA_50uM_1h_03
• OA_50uM_1h_04
• OA_50uM_1h_05
• OA_50uM_1h_06
• OA_50uM_24h_01
• OA_50uM_24h_02
• OA_50uM_2h_01
• OA_50uM_2h_03
• OA_50uM_2h_05
• OA_50uM_2h_06
• OA_50uM_2h_07
• OA_50uM_2h_08
• OA_50uM_2h_10
• OA_50uM_30min_03
• OA_50uM_30min_05
• OA_50uM_30min_07
• OA_50uM_30min_09
• OA_50uM_4h_02
• OA_50uM_4h_04
• OA_50uM_4h_06
• OA_50uM_4h_08
• OA_50uM_4h_09
• PA_100uM_24h_01
• PA_100uM_2h_03
• PA_10uM_10min_02
• PA_5.uM_10min_02
• PA_50uM_10.min_03
• PA_50uM_10min_05
• PA_50uM_10min_09
• PA_50uM_10min_10
• PA_50uM_12h_01
• PA_50uM_12h_02
• PA_50uM_12h_05
• PA_50uM_12h_06
• PA_50uM_1h_03
• PA_50uM_1h_06
• PA_50uM_1h_10
• PA_50uM_24h_01
• PA_50uM_24h_03
• PA_50uM_24h_04
• PA_50uM_24h_06
• PA_50uM_24h_07
• PA_50uM_24h_08
• PA_50uM_24h_09
• PA_50uM_24h_10
• PA_50uM_2h_01
• PA_50uM_2h_02
• PA_50uM_2h_05
• PA_50uM_2h_07
• PA_50uM_2h_08
• PA_50uM_30.min_04
• PA_50uM_30.min_06
• PA_50uM_30.min_07
• PA_50uM_30min_09
• PA_50uM_30min_11
• PA_50uM_3d_01
• PA_50uM_4h_01
• PA_50uM_4h_03
• PA_50uM_4h_04
• PA_50uM_4h_05
• PA_50uM_4h_06
• PA_50uM_4h_07
• PA_50uM_8h_01
• PA_50uM_8h_02
• PA_50uM_8h_03
• PA_50uM_8h_04
• PA_50uM_8h_05
• PA_50uM_8h_06
• H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.1
• H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
• BCG.2hr.phagosomal.profile
• M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
• M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
• MTB.in.Wild.type.macrophages.for.4hrs
• MTB.in.Wild.type.macrophages.for.48hrs
• MTB.in.Wild.type.macrophages...IFNg.for.24hrs
• Russell_Lab_Spotted_Oligos_1.2..14.day.resting.macrophage.infection.2hr..rep.2..Russell_Lab_Spotted_Oligos_1.2..
• Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
• Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
• Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
• Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
• X1ug.mL..59vsDMSO..6h
• X10ug.mL..59.DMSO..6h
• X10ug.mL..59vsDMSO..6h
• X10ug.mL..59vsDMSO..6hA
• X1ug.mL..109vsDMSO..6h
• X10ug.mL..109.DMSO..6h
• X10ug.mL..109vsDMSO..6h
• X10ug.mL..109vsDMSO..6hA
• X.109..1ug.mL..vs.DMSO..12h..replicate.2..GEO.acc.GSM28052.
• X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054.
• X1ug.mL..241vsDMSO..6h
• X10ug.mL..241.DMSO..6h
• X10ug.mL..241vsDMSO..6h
• X40ug.mL.5CL.pH5.6..2h..1
• X40ug.mL.5CL.pH5.6..4h..2
• X80ug.mL.5CL.pH5.6..2h.
• X0.12mg.mL.BZA.pH5.6..2h.
• X0.12mg.mL.BZAvspH5.6..11h.
• X0.12mg.mL.Nam.pH5.6..2h..1
• X0.12mg.mL.Nam.pH5.6..2h..2
• X0.12mg.mL.Nam.pH5.6..4h..2
• X0.12mg.mL.NamvspH5.6..5.5h.
• X0.12mg.mL.NamvspH5.6..7h.
• X1.2mg.mL.NamvspH5.6..5h.
• X0.12mg.mL.PZA.pH5.6..2h.
• X0.12mg.mL.PZA.pH5.6..4h..1
• X0.12mg.mL.PZA.pH5.6..4h..2
• X0.12mg.mL.PZAvspH5.6..4h.
• X0.12mg.mL.PZA.pH5.6..5h.
• X0.12mg.mL.PZAvspH5.6..5.5h.
• X0.12mg.mL.PZAvspH5.6..6h.
• X1.2mg.mL.PZA.pH5.6..2h..
• X1.2mg.mL.PZAvspH5.6..4h.
• X1.2mg.mL.PZAvspH5.6..4h.B
• X1.2mg.mL.PZA.pH5.6..5h.
• X1.2mg.mL.PZAvspH5.6..6h.
• X1.2mg.mL.PZAvspH5.6..6h.A
• X1.2mg.mL.PZAvspH5.6..7h.
• DIPED.50ug.mL.vs.DMSO.12h.1
• DIPED..100ug.mL..DMSO..12h..2
• X0.1mg.mLTriclosanvsEtOH.6hB
• X0.1mg.mLTriclosanvsEtOH.6hC
• X10ug.mL.TriclosanvsDMSO..6h
• X10ug.mL.TriclosanvsDMSO..6hB
• X10ug.mL.TriclosanvsDMSO..6hC
• X50ug.mL.Triclosan.DMSO..6h
• X10ug.mL.EMBvsDMSO..6h
• X10ug.mL.EMBvsDMSO..6hA
• EMB.10ug.mL.vs.DMSO.12h.1
• X0.2mg.mL.AmpvsEtOH..6hB
• X0.2mg.mL.AmpvsEtOH..6hC
• X0.5ug.mL.CervsEtOH..6h
• X0.5ug.mL.CeruleninvsDMSO..6hA
• X0.5ug.mL.CeruleninvsDMSO..6hC
• X100ug.mL.Cephalexin.Ctrl..6h
• X100ug.mL.Ceph.DMSO..6h
• X100ug.mLCephalexinvsEtOH.6h
• X100ug.mLCephalexinvsEtOH.6hA
• X12ug.mLEthionamidevsEtOH.6h
• X12ug.mLEthionamidevsEtOH.6hA
• X40ug.mL.EtavsEtOH..6h
• X40ug.mL.EtavsEtOH..6hA
• X0.2ug.mL.INH.EtOH..6h
• X0.4ug.mL.INHvsEtOH..6h
• X0.4ug.mL.INHvsEtOH..6hA
• X130ug.mL.TLMvsDMSO..6h
• X130ug.mL.TLMvsDMSO..6hA
• X0.13mg.mL.TLMvsDMSO..6h
• X0.13mg.mL.TLMvsDMSO..6hA
• X0.2mg.mL.TLMvsEtOH..6h
• X0.2mg.mL.TLMvsEtOH..6hA
• X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.1
• X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.2
• X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.3.x
• X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.x
• X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
• X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
• X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.1
• X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.2
• X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.1
• X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2
• X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.3
• X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.4
• X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.1
• MTB1254.3524.1._INH_20MIN
• MTB1254_INH_20MIN
• X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.y
• H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
• H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
• H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.1
• H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.2
• H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
• H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
• H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
• H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.1
• H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.2
• H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.1
• H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.2