Bicluster

ID: 552fc823b744335b89d8c4c6
# Conditions: 262
# Genes: 25
Residual: 0.51469376394722

Bicluster Motifs

Bicluster Genes

  • Rv1055
  • Rv1743
  • Rv1789
  • Rv1819c
  • Rv1847
  • Rv2129c
  • Rv2177c
  • Rv2375
  • Rv2565
  • Rv2633c
  • Rv2899c
  • Rv2991
  • Rv3305c
  • Rv3307
  • Rv3331
  • Rv3355c
  • Rv3356c
  • Rv3547
  • Rv3667
  • Rv3668c
  • Rv3685c
  • Rv3687c
  • Rv3733c
  • Rv3734c
  • Rv3735

Bicluster Conditions

  • Whole.Lung.Surfactant.2hrs.rep.3
  • Whole.Lung.Surfactant.30min.rep.1
  • Whole.Lung.Surfactant.30min.rep.4
  • Extracted.Lung.Surfactant.2hrs.rep.2
  • Extracted.Lung.Surfactant.30min.rep.3
  • Extracted.Lung.Surfactant.30min.rep.4
  • Purified.Surfactant.Lipids.2hrs.rep.2
  • Purified.Surfactant.Lipids.30min.rep.1
  • Purified.Human.SP.A.Coated.2hrs.rep1
  • Purified.Human.SP.A.Coated.2hrs.rep2
  • Purified.Human.SP.A.Uncoated.2hrs.rep1
  • Purified.Human.SP.A.Uncoated.2hrs.rep3
  • Purified.Human.SP.A.Uncoated.2hrs.rep4
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
  • AA_30uM_10.min_04
  • AA_30uM_10.min_06
  • AA_30uM_10.min_07
  • AA_30uM_10min_02
  • AA_30uM_10min_03
  • AA_30uM_1h_02
  • AA_30uM_1h_03
  • AA_30uM_1h_07
  • AA_30uM_24h_04
  • AA_30uM_2h_03
  • AA_30uM_2h_07
  • AA_30uM_30min_01
  • AA_30uM_30min_02
  • AA_30uM_30min_05
  • AA_30uM_30min_06
  • AA_30uM_30min_07
  • AA_30uM_30min_08
  • AA_30uM_30min_09
  • AA_30uM_4h_01
  • AA_30uM_4h_05
  • AA_30uM_4h_07
  • AA_30uM_4h_09
  • AA_60uM_24h_01
  • AA_60uM_24h_02
  • L2A_30uM_10min_01
  • L2A_30uM_10min_02
  • L2A_30uM_10min_03
  • L2A_30uM_10min_04
  • L2A_30uM_10min_07
  • L2A_30uM_10min_08
  • L2A_30uM_1h_02
  • L2A_30uM_1h_03
  • L2A_30uM_1h_06
  • L2A_30uM_1h_08
  • L2A_30uM_2h_02
  • L2A_30uM_2h_04
  • L2A_30uM_30min_01
  • L2A_30uM_30min_02
  • L2A_30uM_30min_03
  • L2A_30uM_30min_04
  • L2A_30uM_4h_04
  • L2A_30uM_4h_08
  • LAA_50uM_10min_01
  • LAA_50uM_10min_02
  • OA_50uM_10min_03
  • OA_50uM_10min_05
  • OA_50uM_10min_08
  • OA_50uM_1h_01
  • OA_50uM_1h_03
  • OA_50uM_1h_04
  • OA_50uM_1h_07
  • OA_50uM_1h_09
  • OA_50uM_24h_02
  • OA_50uM_24h_06
  • OA_50uM_2h_04
  • OA_50uM_2h_09
  • OA_50uM_30min_01
  • OA_50uM_30min_02
  • OA_50uM_30min_04
  • OA_50uM_30min_07
  • OA_50uM_30min_08
  • OA_50uM_30min_09
  • PA_10uM_10min_02
  • PA_50uM_10.min_02
  • PA_50uM_10.min_03
  • PA_50uM_10min_01
  • PA_50uM_10min_04
  • PA_50uM_10min_06
  • PA_50uM_12h_03
  • PA_50uM_1h_01
  • PA_50uM_1h_03
  • PA_50uM_1h_06
  • PA_50uM_1h_07
  • PA_50uM_1h_10
  • PA_50uM_24h_03
  • PA_50uM_24h_08
  • PA_50uM_24h_09
  • PA_50uM_24h_10
  • PA_50uM_2h_04
  • PA_50uM_2h_05
  • PA_50uM_2h_06
  • PA_50uM_2h_08
  • PA_50uM_30.min_05
  • PA_50uM_30.min_06
  • PA_50uM_30.min_07
  • PA_50uM_30min_01
  • PA_50uM_30min_02
  • PA_50uM_30min_08
  • PA_50uM_30min_10
  • PA_50uM_3d_03
  • PA_50uM_3d_05
  • PA_50uM_3d_06
  • PA_50uM_4h_03
  • PA_50uM_4h_04
  • PA_50uM_4h_05
  • PA_50uM_4h_06
  • PA_50uM_4h_07
  • PA_50uM_8h_01
  • PA_50uM_8h_03
  • PA_5uM_10.min_01
  • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.1
  • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.2
  • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3
  • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
  • BCG.2hr.phagosomal.profile
  • M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
  • M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
  • Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
  • Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
  • Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
  • X1ug.mL..59vsDMSO..6h
  • X1ug.mL..59vsDMSO..6hA
  • X10ug.mL..109.DMSO..6h
  • X10ug.mL..109vsDMSO..6hA
  • X.109..0.1ug.mL..vs.DMSO..12h..GEO.acc.GSM28050.
  • X.109..1ug.mL..vs.DMSO..12h..replicate.1..GEO.ac.GSM28051.
  • X.109..1ug.mL..vs.DMSO..12h..replicate.2..GEO.acc.GSM28052.
  • X.109..10ug.mL..vs.DMSO..12h..replicate.1..GEO.acc..GSM28053.
  • X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054.
  • X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046.
  • X.241..1ug.mL..DMSO..12h..1
  • X40ug.mL.5CL.pH5.6..2h..1
  • X40ug.mL.5CL.pH5.6..2h..2
  • X40ug.mL.5CL.pH5.6..4h..2
  • X40ug.mL.5CL.pH5.6..4h..3
  • X80ug.mL.5CL.pH5.6..2h.
  • X0.12mg.mL.BZA.pH5.6..2h.
  • X0.12mg.mL.BZAvspH5.6..5h.
  • X0.12mg.mL.BZAvspH5.6..7h.
  • X0.12mg.mL.BZAvspH5.6..11h.
  • X0.12mg.mL.Nam.pH5.6..2h..1
  • X0.12mg.mL.Nam.pH5.6..4h..2
  • X0.12mg.mL.NamvspH5.6..4h.
  • X0.12mg.mL.NamvspH5.6..5.5h.
  • X0.12mg.mL.NamvspH5.6..7h.
  • X1.2mg.mL.NamvspH5.6..5h.
  • X1.2mg.mL.NamvspH5.6..10.5h.
  • X0.12mg.mL.PZA.pH5.6..2h.
  • X0.12mg.mL.PZA.pH5.6..2.5h.
  • X0.12mg.mL.PZA.pH5.6..4h..1
  • X0.12mg.mL.PZA.pH5.6..4h..2
  • X0.12mg.mL.PZAvspH5.6..4h.
  • X0.12mg.mL.PZAvspH5.6..4h.A
  • X0.12mg.mL.PZA.pH5.6..5h.
  • X0.12mg.mL.PZAvspH5.6..5.5h.
  • X0.12mg.mL.PZAvspH5.6..10.5h.
  • X0.12mg.mL.PZAvspH5.6..11h.
  • X1.2mg.mL.PZA.pH5.6..2h..
  • X1.2mg.mL.PZAvspH5.6..4h.
  • X1.2mg.mL.PZAvspH5.6..4h.B
  • X1.2mg.mL.PZA.pH5.6..5h.
  • X1.2mg.mL.PZAvspH5.6..6h.
  • X1.2mg.mL.PZAvspH5.6..6h.A
  • X1.2mg.mL.PZAvspH5.6..7h.
  • X1.2mg.mL.PZAvspH5.6..7h.A
  • X1.2mg.mL.PZAvspH5.6..10.5h.
  • DIPED.5ug.mL.vs.DMSO.12h.1
  • DIPED.5ug.mL.vs.DMSO.12h.2
  • DIPED.10ug.mL.vs.DMSO.12h.1
  • DIPED.10ug.mL.vs.DMSO.12h.2
  • DIPED..50ug.mL..DMSO..12h
  • DIPED.50ug.mL.vs.DMSO.12h.2
  • DIPED..100ug.mL..DMSO..12h..1
  • DIPED..100ug.mL..DMSO..12h..2
  • DIPED..100ug.mL..DMSO..12h..3
  • X0.1mg.mLTriclosanvsEtOH.6hC
  • X10ug.mL.TriclosanvsDMSO..6hA
  • X10ug.mL.TriclosanvsDMSO..6hB
  • X50ug.mL.Triclosan.DMSO..6h
  • X50ug.mL.Triclosan.EtOH
  • X100ug.mL.TriclosanvsEtOH..6hA
  • X10ug.mL.EMBvsDMSO..6hA
  • EMB..10ug.mL..DMSO..12h
  • EMB.10ug.mL.vs.DMSO.12h.2
  • EMB.10ug.mL.vs.DMSO.12h.3
  • EMB.10ug.mL.vs.DMSO.12h.4
  • X20ug.mL.ethambutol.DMSO
  • X0.2mg.mL.AmpvsEtOH..6hB
  • X0.2mg.mL.AmpvsEtOH..6hC
  • X0.32ug.mL.CervsEtOH..6hA
  • X0.5ug.mL.CervsEtOH..6h
  • X0.5ug.mL.CeruleninvsDMSO..6hA
  • X20ug.mL.Cephalexin.Ctrl..6h..2
  • X100ug.mL.Cephalexin.Ctrl..6h
  • X100ug.mL.Ceph.DMSO..6h
  • X100ug.mL.Cphx.DMSO..6h
  • X40ug.mL.EtavsEtOH..6h
  • X40ug.mL.EtavsEtOH..6hA
  • X0.2ug.mL.INH.EtOH..6h
  • X0.4ug.mL.INHvsEtOH..6hA
  • X130ug.mL.TLMvsDMSO..6h
  • X130ug.mL.TLMvsDMSO..6hA
  • X0.2mg.mL.TLMvsEtOH..6h
  • X0.2mg.mL.TLMvsEtOH..6hA
  • X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.1
  • X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.x
  • X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1
  • X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
  • X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.1
  • X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2
  • X130ug.ml.TLM.vs.DMSO.6hrs.rep.2
  • X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.2
  • X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.1
  • X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2
  • X0.2mg.ml.Ampicillin.vs.Ethanol.6hrs
  • X10ug.ml.Ethambutol.vs.DMSO.12hrs.3
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.1
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.2
  • H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
  • H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
  • H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
  • H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
  • H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
  • H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1
  • H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.1
  • H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.2
  • H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.2
  • H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.2
  • H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.1
  • H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.2