Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0367c
• Rv0441c
• Rv0750
• Rv0832
• Rv0833
• Rv0902c
• Rv1576c
• Rv2009
• Rv2010
• Rv2161c
• Rv2304c
• Rv2326c
• Rv2345
• Rv2499c
• Rv2540c
• Rv2634c
• Rv2918c
• Rv3037c
• Rv3072c
• Rv3422c
• Rv3452
• Rv3544c
• Rv3702c
• Rv3857c

Bicluster Conditions

• High.iron.wt.vs.low.iron.wt.2a
• High.iron.wt.vs.low.iron.wt.3b
• Whole.Lung.Surfactant.2hrs.rep.1
• Whole.Lung.Surfactant.2hrs.rep.3
• Whole.Lung.Surfactant.30min.rep.1
• Whole.Lung.Surfactant.30min.rep.4
• Whole.Lung.Surfactant.30min.rep.5
• Extracted.Lung.Surfactant.2hrs.rep.2
• Extracted.Lung.Surfactant.30min.rep.1
• Extracted.Lung.Surfactant.30min.rep.2
• Extracted.Lung.Surfactant.30min.rep.4
• Purified.Surfactant.Lipids.2hrs.rep.2
• Purified.Surfactant.Lipids.30min.rep.2
• Purified.Human.SP.A.Coated.2hrs.rep1
• Purified.Human.SP.A.Coated.2hrs.rep2
• Purified.Human.SP.A.Uncoated.2hrs.rep1
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
• AA_10uM_10min_01
• AA_30uM_10.min_04
• AA_30uM_10.min_05
• AA_30uM_10min_03
• AA_30uM_1h_01
• AA_30uM_1h_04
• AA_30uM_1h_05
• AA_30uM_1h_06
• AA_30uM_1h_08
• AA_30uM_2h_02
• AA_30uM_2h_04
• AA_30uM_2h_05
• AA_30uM_2h_06
• AA_30uM_2h_07
• AA_30uM_2h_08
• AA_30uM_30min_02
• AA_30uM_30min_03
• AA_30uM_30min_06
• AA_30uM_30min_08
• AA_30uM_4h_01
• AA_30uM_4h_02
• AA_30uM_4h_03
• AA_3uM_10min_02
• L2A_30uM_10min_01
• L2A_30uM_10min_02
• L2A_30uM_10min_05
• L2A_30uM_10min_07
• L2A_30uM_1h_04
• L2A_30uM_1h_05
• L2A_30uM_1h_07
• L2A_30uM_1h_08
• L2A_30uM_2h_01
• L2A_30uM_2h_02
• L2A_30uM_2h_03
• L2A_30uM_2h_05
• L2A_30uM_30min_02
• L2A_30uM_30Min_06
• L2A_30uM_4h_05
• L2A_30uM_4h_08
• LAA_50uM_10min_02
• OA_50uM_10min_01
• OA_50uM_10min_02
• OA_50uM_10min_03
• OA_50uM_10min_04
• OA_50uM_10min_05
• OA_50uM_10min_06
• OA_50uM_10min_07
• OA_50uM_10min_08
• OA_50uM_1h_01
• OA_50uM_1h_03
• OA_50uM_1h_04
• OA_50uM_1h_05
• OA_50uM_1h_06
• OA_50uM_1h_09
• OA_50uM_24h_01
• OA_50uM_2h_03
• OA_50uM_2h_04
• OA_50uM_2h_05
• OA_50uM_2h_06
• OA_50uM_2h_07
• OA_50uM_2h_08
• OA_50uM_2h_10
• OA_50uM_30min_01
• OA_50uM_30min_02
• OA_50uM_30min_05
• OA_50uM_30min_06
• OA_50uM_30min_07
• OA_50uM_4h_01
• OA_50uM_4h_03
• OA_50uM_4h_06
• OA_50uM_4h_08
• OA_50uM_4h_09
• PA_100uM_24h_01
• PA_100uM_2h_03
• PA_10uM_10.min_01
• PA_10uM_10min_02
• PA_5.uM_10min_02
• PA_50uM_10min_01
• PA_50uM_10min_06
• PA_50uM_10min_07
• PA_50uM_10min_08
• PA_50uM_10min_09
• PA_50uM_10min_10
• PA_50uM_12h_01
• PA_50uM_12h_03
• PA_50uM_12h_04
• PA_50uM_12h_05
• PA_50uM_12h_06
• PA_50uM_1h_02
• PA_50uM_1h_03
• PA_50uM_1h_04
• PA_50uM_1h_05
• PA_50uM_1h_06
• PA_50uM_24h_01
• PA_50uM_24h_02
• PA_50uM_24h_03
• PA_50uM_24h_04
• PA_50uM_24h_06
• PA_50uM_24h_08
• PA_50uM_24h_09
• PA_50uM_24h_10
• PA_50uM_2h_02
• PA_50uM_2h_03
• PA_50uM_2h_04
• PA_50uM_2h_05
• PA_50uM_2h_07
• PA_50uM_2h_08
• PA_50uM_30.min_04
• PA_50uM_30.min_06
• PA_50uM_30.min_07
• PA_50uM_30min_01
• PA_50uM_30min_02
• PA_50uM_30min_03
• PA_50uM_30min_09
• PA_50uM_3d_01
• PA_50uM_3d_05
• PA_50uM_4h
• PA_50uM_4h_01
• PA_50uM_4h_02
• PA_50uM_4h_03
• PA_50uM_4h_05
• PA_50uM_4h_06
• PA_50uM_4h_07
• PA_50uM_8h_01
• PA_50uM_8h_02
• PA_50uM_8h_03
• PA_50uM_8h_04
• PA_50uM_8h_05
• PA_50uM_8h_06
• H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.1
• H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3
• H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
• M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
• MTB.in.Wild.type.macrophages...IFNg.for.4hrs
• MTB.in.Wild.type.macrophages...IFNg.for.24hrs
• MTB.in.Wild.type.macrophages...IFNg.for.48hrs
• Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
• Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
• Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
• Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
• Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
• X1ug.mL..59vsDMSO..6h
• X1ug.mL..59vsDMSO..6hA
• X10ug.mL..59vsDMSO..6hA
• X1ug.mL..109vsDMSO..6h
• X1ug.mL..109vsDMSO..6hA
• X10ug.mL..109vsDMSO..6h
• X.109..0.1ug.mL..vs.DMSO..12h..GEO.acc.GSM28050.
• X.109..1ug.mL..vs.DMSO..12h..replicate.2..GEO.acc.GSM28052.
• X.109..10ug.mL..vs.DMSO..12h..replicate.1..GEO.acc..GSM28053.
• X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054.
• X1ug.mL..241vsDMSO..6h
• X1ug.mL..241vsDMSO..6hA
• X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046.
• X.241..1ug.mL..DMSO..12h..1
• X40ug.mL.5CL.pH5.6..2h..1
• X40ug.mL.5CL.pH5.6..2h..2
• X0.12mg.mL.Nam.pH5.6..2h..1
• X0.12mg.mL.NamvspH5.6..4h.
• X0.12mg.mL.NamvspH5.6..5.5h.
• X1.2mg.mL.NamvspH5.6..5h.
• X0.12mg.mL.PZAvspH5.6..6h.A
• X0.12mg.mL.PZAvspH5.6..10.5h.
• X0.12mg.mL.PZAvspH5.6..11h.
• X1.2mg.mL.PZA.pH5.6..5h.
• X1.2mg.mL.PZAvspH5.6..10.5h.
• DIPED.5ug.mL.vs.DMSO.12h.1
• DIPED.10ug.mL.vs.DMSO.12h.1
• DIPED.10ug.mL.vs.DMSO.12h.2
• DIPED..50ug.mL..DMSO..12h
• DIPED.50ug.mL.vs.DMSO.12h.2
• DIPED..100ug.mL..DMSO..12h..2
• DIPED..100ug.mL..DMSO..12h..3
• X10ug.mL.TriclosanvsDMSO..6hB
• X10ug.mL.TriclosanvsDMSO..6hC
• X10ug.mL.EMBvsDMSO..6h
• EMB.10ug.mL.vs.DMSO.12h.1
• EMB.10ug.mL.vs.DMSO.12h.2
• EMB.10ug.mL.vs.DMSO.12h.3
• EMB.10ug.mL.vs.DMSO.12h.4
• X0.32ug.mL.CervsEtOH..6h
• X0.32ug.mL.CervsEtOH..6hA
• X0.5ug.mL.CervsEtOH..6hA
• X0.5ug.mL.CeruleninvsDMSO..6hA
• X0.5ug.mL.CeruleninvsDMSO..6hB
• X130ug.mL.TLMvsDMSO..6h
• X130ug.mL.TLMvsDMSO..6hA
• X0.13mg.mL.TLMvsDMSO..6h
• X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.1
• X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.2
• X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.3.x
• X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.x
• X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
• X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1
• X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
• X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.1
• X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.2
• X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.1
• X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2
• X130ug.ml.TLM.vs.DMSO.6hrs.rep.1
• X130ug.ml.TLM.vs.DMSO.6hrs.rep.2
• X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.1
• X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.2
• X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.1
• X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.2
• X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.3
• X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.4
• X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.1
• X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2
• MTB1254.3524.1._INH_20MIN
• MTB1254_INH_20MIN
• X10ug.ml.Ethambutol.vs.DMSO.12hrs.3
• X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.y
• X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.3.y
• H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
• H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
• H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
• H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.2
• H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.1
• H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.2
• H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.2
• H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.1
• H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.1
• H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.2