Bicluster – MTB EGRIN 2.0

ID: 552effb0b744335b89d419af
# Conditions: 165
# Genes: 46
Residual: 0.63869160253655

Bicluster Motifs

Bicluster Genes

Rv0151c
Rv0197
Rv0211
Rv0240
Rv0294
Rv0302
Rv0333
Rv0420c
Rv0471c
Rv0588
Rv0589
Rv0611c
Rv0749
Rv0871
Rv0900
Rv1014c
Rv1036c
Rv1042c
Rv1046c
Rv1192
Rv1313c
Rv1374c
Rv1392
Rv1453
Rv1463
Rv1787
Rv1952
Rv2104c
Rv2116
Rv2295
Rv2401
Rv2451
Rv2494
Rv2543
Rv2708c
Rv3049c
Rv3211
Rv3260c
Rv3383c
Rv3416
Rv3426
Rv3429
Rv3525c
Rv3641c
Rv3729
Rv3831

Bicluster Conditions

H37Rv.hypoxia.2hr.rep.1
H37Rv.hypoxia.2hr.rep.2
NRP.Day6..1
NRP.Day8..2
NRP.Day8..3
NRP.Day10..1
NRP.Day10..2
NRP.Day10..3
NRP.Day12..1
NRP.Day12..3
NRP.Day14..3
NRP.Day14..5
NRP.Day14..9
NRP.Day30..1
pH4.8vspH6.8..2h.
pH4.8vspH6.8..2h.A
pH4.8vspH6.8..4h.
pH4.8vspH6.8..4h.A
pH4.8vspH6.8..4h.C
pH4.8vspH6.8..5.5h.
pH4.8vspH6.8..6h.
pH4.8vspH6.8..7h.
pH5.2vspH6.8..2h.
pH5.2vspH6.8..5h.
pH5.2vspH6.8..16h.
pH5.6vspH6.8..2h.
pH5.6vspH6.8..2h.A
H37Rv.hypoxia.4hr.rep.2
H37Rv.hypoxia.4hr.rep.3
H37Rv.hypoxia.4hr.rep.7
H37Rv.hypoxia.8hr.rep.1
H37Rv.hypoxia.8hr.rep.3
H37Rv.hypoxia.12hr.rep.1
H37Rv.hypoxia.12hr.rep.2
H37Rv.hypoxia.12hr.rep.3
H37Rv.hypoxia.1.day.rep.2
H37Rv.hypoxia.1.day.rep.4
H37Rv.hypoxia.1.day.rep.5
H37Rv.hypoxia.1.day.rep.6
H37Rv.hypoxia.1.day.rep.9
H37Rv.hypoxia.1.day.rep.10
H37Rv.hypoxia.4.day.rep.1
H37Rv.hypoxia.4.day.rep.2
H37Rv.hypoxia.4.day.rep.6
H37Rv.hypoxia.7.day.rep.3
H37Rv.hypoxia.7.day.rep.5
H37Rv.hypoxia.7.day.rep.6
H37Rv.hypoxia.7.day.rep.7
aceatate.induction.2
Acetate.3mM.10m.01
Acetate.3mM.10m.03
Acetate.3mM.10m.05
Acetate.3mM.10m.06
Acetate.3mM.10m_04
Acetate.3mM.2h.01
Acetate.3mM.2h.02
Acetate.3mM.2h.04
Acetate.3mM.2h.05
Acetate.3mM.2h.06
Acetate.3mM.30m.01
Acetate.3mM.30m.02
Acetate.3mM.30m.03
Acetate.3mM.30m.05
Acetate.3mM.60m.01
Acetate.3mM.60m.03
Acetate.3mM.60m.04
Starvation_1254_12h_01
Starvation_1254_12h_02
Starvation_1254_12h_03
Starvation_1254_12h_04
Starvation_1254_24h_01
Starvation_1254_24h_03
Starvation_1254_24h_04
Starvation_1254_24h_06
Starvation_1254_24h_08
Starvation_1254_3d_01
Starvation_1254_3d_02
Starvation_1254_3d_03
Starvation_1254_3d_04
Starvation_1254_5d_01
Starvation_1254_5d_02
Starvation_1254_5d_03
Starvation_1254_5d_04
Starvation_1254_6h_01
Starvation_1254_6h_03
Starvation_1254_6h_04
Starvation_1254_6h_05
Starvation_1254_6h_08
Starvation_1254_OA50_12h_01
Starvation_1254_OA50_12h_02
Starvation_1254_OA50_12h_03
Starvation_1254_OA50_24h_02
Starvation_1254_OA50_24h_03
Starvation_1254_OA50_24h_04
Starvation_1254_OA50_3d_02
Starvation_1254_OA50_5d_01
Starvation_1254_OA50_5d_03
Starvation_1254_OA50_5d_04
Starvation_1254_OA50_6h_01
Starvation_1254_OA50_6h_02
Starvation_1254_OA50_6h_03
Starvation_1254_OA50_6h_04
Starvation_1254_PA50_24h_01
Starvation_1254_PA50_24h_02
Starvation_1254_PA50_24h_04
Starvation_1254_PA50_6h_03
Starvation_1254_PA50_6h_04
Starvation_OA50_24h_02
Starvation_OA50_6h_01
Starvation_OA50_6h_02
Starvation_OA50_6h_03
Starvation_OA50_6h_04
SG2.B0_N02A09c3
SG6.H0_N5A03cy.5
SG7.BT0_N11A02cy.5
SG8.A.Day.0.pre_fix_N37A04cy.5
SG8.B.Day.0.pre_N37A12cy.3
SG8.D.Day.0.pre_N27A10cy.3
SG.ISB.3.0A_N30A01cy.3
SG.ISB.3.0B_N30A01cy.5
SG.ISB.3.0C_N30A02cy.3
SG8.C.Day.1_N27A09cy.3
SG8.A.Day.1_fix_N37A03cy.5
SG7.AT1_N11A05cy.5
SG6.D1_N5A05cy.5
SG6.C1_N5A04cy.5
SG8.C.Day.2_N37A12cy.5
SG8.B.Day.2_N37A06cy.5
SG8.B.Day.3_N37A07cy.5
SG2.A3_N02A04c3
SG2.D3_N02A04c5
SG8.A.Day.5_N37A10cy.3
SG8.B.Day.5_N37A08cy.5
SG2.D5_N02A05c5
SG2.D7_N02A06c5
SG6D.T7_N11A02cy.3
SG6C.T7_N11A01cy.3
SG6_A7_N7A12cy.3
SG8.B.Day.7_N37A09cy.5
SG8.A.Day.7_N37A11cy.3
SG.ISB.3.7A_N30A02cy.5
SG12.C0_N32A05cy.5
SG12.A0_N32A01cy.3
SG12.A1_N32A02cy.3
SG12.B1_N32A10cy.3
SG12.C6_N32A09cy.5
SG12.B8_N32A02cy.5
SG12.B24_N32A03cy.5
SG2.A8_N02A07c3
SG2.B8_N02A11c5
SG2.D8_N02A07c5
SG6D.T8_N11A03cy.3
SG6.D8_N5A09cy.5
SG6.C8_N5A08cy.5
SG6.A8_N5A06cy.5
SG.ISB.3.8B_N30A05cy.3
SG.ISB.3.8D_N30A06cy.3
SG2.D9_N02A08c5
SG6.D11_N8A09cy.5
SG6.A11_N5A10cy.5
SG7.T12A_N11A09cy.3
SG12.C120_N32A12cy.5
SG6.A14_N8A10cy.5
SG6.B14_N8A11cy.5
SG6.C14_N8A12cy.5

Column members cluster 552effb0b744335b89d419af Species (TODO)

H37Rv.hypoxia.2hr.rep.1
H37Rv.hypoxia.2hr.rep.2
NRP.Day6..1
NRP.Day8..2
NRP.Day8..3
NRP.Day10..1
NRP.Day10..2
NRP.Day10..3
NRP.Day12..1
NRP.Day12..3
NRP.Day14..3
NRP.Day14..5
NRP.Day14..9
NRP.Day30..1
pH4.8vspH6.8..2h.
pH4.8vspH6.8..2h.A
pH4.8vspH6.8..4h.
pH4.8vspH6.8..4h.A
pH4.8vspH6.8..4h.C
pH4.8vspH6.8..5.5h.
pH4.8vspH6.8..6h.
pH4.8vspH6.8..7h.
pH5.2vspH6.8..2h.
pH5.2vspH6.8..5h.
pH5.2vspH6.8..16h.
pH5.6vspH6.8..2h.
pH5.6vspH6.8..2h.A
H37Rv.hypoxia.4hr.rep.2
H37Rv.hypoxia.4hr.rep.3
H37Rv.hypoxia.4hr.rep.7
H37Rv.hypoxia.8hr.rep.1
H37Rv.hypoxia.8hr.rep.3
H37Rv.hypoxia.12hr.rep.1
H37Rv.hypoxia.12hr.rep.2
H37Rv.hypoxia.12hr.rep.3
H37Rv.hypoxia.1.day.rep.2
H37Rv.hypoxia.1.day.rep.4
H37Rv.hypoxia.1.day.rep.5
H37Rv.hypoxia.1.day.rep.6
H37Rv.hypoxia.1.day.rep.9
H37Rv.hypoxia.1.day.rep.10
H37Rv.hypoxia.4.day.rep.1
H37Rv.hypoxia.4.day.rep.2
H37Rv.hypoxia.4.day.rep.6
H37Rv.hypoxia.7.day.rep.3
H37Rv.hypoxia.7.day.rep.5
H37Rv.hypoxia.7.day.rep.6
H37Rv.hypoxia.7.day.rep.7
aceatate.induction.2
Acetate.3mM.10m.01
Acetate.3mM.10m.03
Acetate.3mM.10m.05
Acetate.3mM.10m.06
Acetate.3mM.10m_04
Acetate.3mM.2h.01
Acetate.3mM.2h.02
Acetate.3mM.2h.04
Acetate.3mM.2h.05
Acetate.3mM.2h.06
Acetate.3mM.30m.01
Acetate.3mM.30m.02
Acetate.3mM.30m.03
Acetate.3mM.30m.05
Acetate.3mM.60m.01
Acetate.3mM.60m.03
Acetate.3mM.60m.04
Starvation_1254_12h_01
Starvation_1254_12h_02
Starvation_1254_12h_03
Starvation_1254_12h_04
Starvation_1254_24h_01
Starvation_1254_24h_03
Starvation_1254_24h_04
Starvation_1254_24h_06
Starvation_1254_24h_08
Starvation_1254_3d_01
Starvation_1254_3d_02
Starvation_1254_3d_03
Starvation_1254_3d_04
Starvation_1254_5d_01
Starvation_1254_5d_02
Starvation_1254_5d_03
Starvation_1254_5d_04
Starvation_1254_6h_01
Starvation_1254_6h_03
Starvation_1254_6h_04
Starvation_1254_6h_05
Starvation_1254_6h_08
Starvation_1254_OA50_12h_01
Starvation_1254_OA50_12h_02
Starvation_1254_OA50_12h_03
Starvation_1254_OA50_24h_02
Starvation_1254_OA50_24h_03
Starvation_1254_OA50_24h_04
Starvation_1254_OA50_3d_02
Starvation_1254_OA50_5d_01
Starvation_1254_OA50_5d_03
Starvation_1254_OA50_5d_04
Starvation_1254_OA50_6h_01
Starvation_1254_OA50_6h_02
Starvation_1254_OA50_6h_03
Starvation_1254_OA50_6h_04
Starvation_1254_PA50_24h_01
Starvation_1254_PA50_24h_02
Starvation_1254_PA50_24h_04
Starvation_1254_PA50_6h_03
Starvation_1254_PA50_6h_04
Starvation_OA50_24h_02
Starvation_OA50_6h_01
Starvation_OA50_6h_02
Starvation_OA50_6h_03
Starvation_OA50_6h_04
SG2.B0_N02A09c3
SG6.H0_N5A03cy.5
SG7.BT0_N11A02cy.5
SG8.A.Day.0.pre_fix_N37A04cy.5
SG8.B.Day.0.pre_N37A12cy.3
SG8.D.Day.0.pre_N27A10cy.3
SG.ISB.3.0A_N30A01cy.3
SG.ISB.3.0B_N30A01cy.5
SG.ISB.3.0C_N30A02cy.3
SG8.C.Day.1_N27A09cy.3
SG8.A.Day.1_fix_N37A03cy.5
SG7.AT1_N11A05cy.5
SG6.D1_N5A05cy.5
SG6.C1_N5A04cy.5
SG8.C.Day.2_N37A12cy.5
SG8.B.Day.2_N37A06cy.5
SG8.B.Day.3_N37A07cy.5
SG2.A3_N02A04c3
SG2.D3_N02A04c5
SG8.A.Day.5_N37A10cy.3
SG8.B.Day.5_N37A08cy.5
SG2.D5_N02A05c5
SG2.D7_N02A06c5
SG6D.T7_N11A02cy.3
SG6C.T7_N11A01cy.3
SG6_A7_N7A12cy.3
SG8.B.Day.7_N37A09cy.5
SG8.A.Day.7_N37A11cy.3
SG.ISB.3.7A_N30A02cy.5
SG12.C0_N32A05cy.5
SG12.A0_N32A01cy.3
SG12.A1_N32A02cy.3
SG12.B1_N32A10cy.3
SG12.C6_N32A09cy.5
SG12.B8_N32A02cy.5
SG12.B24_N32A03cy.5
SG2.A8_N02A07c3
SG2.B8_N02A11c5
SG2.D8_N02A07c5
SG6D.T8_N11A03cy.3
SG6.D8_N5A09cy.5
SG6.C8_N5A08cy.5
SG6.A8_N5A06cy.5
SG.ISB.3.8B_N30A05cy.3
SG.ISB.3.8D_N30A06cy.3
SG2.D9_N02A08c5
SG6.D11_N8A09cy.5
SG6.A11_N5A10cy.5
SG7.T12A_N11A09cy.3
SG12.C120_N32A12cy.5
SG6.A14_N8A10cy.5
SG6.B14_N8A11cy.5
SG6.C14_N8A12cy.5