Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0382c
• Rv0597c
• Rv0666
• Rv1215c
• Rv1333
• Rv1337
• Rv1422
• Rv1443c
• Rv1842c
• Rv2131c
• Rv2148c
• Rv2149c
• Rv2151c
• Rv2152c
• Rv2155c
• Rv2217
• Rv2539c
• Rv2681
• Rv2687c
• Rv2726c
• Rv3410c
• Rv3654c
• Rv3812

Bicluster Conditions

• H37Rv..7H9.roll.replicate.2.x
• H37Rv..7H9.roll.replicate.3.x
• H37Rv..7H9.shake.replicate.1
• H37Rv..7H9.shake.replicate.2
• H37Rv..7H9.shake.replicate.3
• H37Rv..7H9.shake.replicate.4
• H37Rv..Dubos.media.replicate.4
• H37Rv..Sauton.s.media.replicate.1
• H37Rv..Sauton.s.media.replicate.4
• H37Rv..Youman.media.replicate.1
• H37Rv..Youman.media.replicate.3
• H37Rv..7H9.roll.replicate.1.y
• H37Rv..7H9.roll.replicate.2.y
• H37Rv..7H9.roll.replicate.3.y
• H37Rv..7H9.roll.replicate.4.y
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.x
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.x
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.x
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.4
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1.x
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3.x
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4.x
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.1
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.2
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.3
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.4
• MTB1254.vs..MTB1254.rep5
• MTB1254.vs..MTB1254.rep6
• X0.02mM.GSNOvsDMSO..6h
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
• H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3
• H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1
• H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3
• CDC1551.Ctrl.vs.H37Rv.rep.1
• CDC1551.Ctrl.vs.H37Rv.rep.2
• CDC1551.Ctrl.vs.H37Rv.rep.3
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.ctrl.vs.ctrl.at.0.hr.rep.2
• M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
• M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
• WT.TB.rep3
• MTB.in.Wild.type.macrophages.for.4hrs
• MTB.in.Wild.type.macrophages.for.24hrs
• MTB.in.Wild.type.macrophages.for.48hrs
• MTB.in.Wild.type.macrophages...IFNg.for.4hrs
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.3
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2.y
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4.y
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2.y
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4.y
• MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.2
• Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
• Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
• Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
• Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
• Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
• Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
• SS_A1_RV.1
• SS_A1_RV.2
• wild.type..mc.2.6020...biological.rep1
• wild.type..mc.2.6020...biological.rep2
• Rif.0.5ug.mL.vsDMSO.2.5h
• Rif.5ug.mL.vsDMSO.2.5h