Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0103c
• Rv0200
• Rv0203
• Rv0517
• Rv0945
• Rv0955
• Rv1002c
• Rv1062
• Rv1201c
• Rv1923
• Rv2118c
• Rv2419c
• Rv2571c
• Rv2572c
• Rv3011c
• Rv3015c
• Rv3106

Bicluster Conditions

• H37Rv.hypoxia.2hr.rep.1
• H37Rv.hypoxia.2hr.rep.2
• H37Rv.hypoxia.2hr.rep.6
• NRP.Day6..3
• NRP.Day14..2
• NRP.Day14..6
• NRP.Day14..7
• Mtm.0.2ug.mL.vs.ctrl.8h.1.x
• Mtm.0.2ug.mL.vs.ctrl.12h.1.x
• X4mM.H2O2vsctrl..2h.
• X4mM.H2O2vsctrl..2h.A
• X4mM.H2O2.ctrl..4h...1
• X4mM.H2O2.ctrl..4h...2
• X4mM.H2O2vsctrl..4h.A
• H2O2.4mM.vs.ctrl.8h.1
• X20mJ.UVvsctrl..6h.
• UV.20J.vs.ctrl.8h.1
• UV.40J.vs.8h.2
• X40mJ.UV.ctrl..6h.
• UV.40J.vs.ctrl.8h.1
• UV.40J.vs.ctrl.12h.1
• X60J.UVvsctrl..6h.
• UV.60J.vs.ctrl.6h.1
• H37Rv.hypoxia.4hr.rep.1
• H37Rv.hypoxia.4hr.rep.2
• H37Rv.hypoxia.4hr.rep.3
• H37Rv.hypoxia.4hr.rep.4
• H37Rv.hypoxia.4hr.rep.5
• H37Rv.hypoxia.4hr.rep.6
• H37Rv.hypoxia.4hr.rep.7
• H37Rv.hypoxia.8hr.rep.3
• H37Rv.hypoxia.12hr.rep.1
• H37Rv.hypoxia.12hr.rep.3
• H37Rv.hypoxia.1.day.rep.2
• H37Rv.hypoxia.1.day.rep.6
• H37Rv.hypoxia.1.day.rep.9
• H37Rv.hypoxia.1.day.rep.10
• H37Rv.hypoxia.4.day.rep.1
• H37Rv.hypoxia.4.day.rep.7
• H37Rv.hypoxia.7.day.rep.2
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
• CHP_25uM_1h_01
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
• BCG.2hr.phagosomal.profile
• M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
• MTB.in.Wild.type.macrophages.for.4hrs
• MTB.in.Wild.type.macrophages.for.24hrs
• MTB.in.Wild.type.macrophages...IFNg.for.24hrs
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.6
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.5
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.6
• Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
• Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
• Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
• Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
• SG7.AT0_N11A01cy.5
• SG7.BT0_N11A02cy.5
• SG7.DT0_N11A04cy.5
• SG8.B.Day.0.pre_N37A12cy.3
• SG8.C.Day.0.post_N27A08cy.3
• SG8.C.Day.0.pre_N27A07cy.3
• SG8.C.Day.0.post_N37A10cy.5
• SG.ISB.3.0A_N30A01cy.3
• SG.ISB.3.0B_N30A01cy.5
• SG.ISB.3.0C_N30A02cy.3
• SG8.C.Day.1_N37A11cy.5
• SG8.C.Day.1_N27A09cy.3
• SG8.D.Day.1_N27A12cy.3
• SG8.B.Day.1_N37A05cy.5
• SG8.A.Day.1_fix_N37A03cy.5
• SG7.CT1_N11A07cy.5
• SG7.BT1_N11A06cy.5
• SG7.AT1_N11A05cy.5
• SG6_A1_N7A11cy.3
• SG6.D1_N5A05cy.5
• SG8.A.Day.2_N37A08cy.3
• SG8.C.Day.2_N37A12cy.5
• SG8.B.Day.2_N37A06cy.5
• SG2.A2_N02A03c3
• SG2.B2_N02A11c3
• SG8.B.Day.3_N37A07cy.5
• SG2.A3_N02A04c3
• SG8.A.Day.5_N37A10cy.3
• SG8.B.Day.5_N37A08cy.5
• SG2.A5_N02A05c3
• SG2.D5_N02A05c5
• SG2.A7_N02A06c3
• SG6C.T7_N11A01cy.3
• SG6_B7_N7A12cy.5
• SG8.B.Day.7_N37A09cy.5
• SG.ISB.3.7C_N30A03cy.5
• SG12.C0_N32A05cy.5
• SG12.A1_N32A02cy.3
• SG12.B1_N32A10cy.3
• SG12.C1_N32A06cy.5
• SG12.A2_N32A03cy.3
• SG12.B2_N32A11cy.3
• SG12.C2_N32A07cy.5
• SG12.B4_N32A12cy.3
• SG12.C4_N32A08cy.5
• SG12.B6_N32A01cy.5
• SG12.C6_N32A09cy.5
• SG12.B24_N32A03cy.5
• SG2.A8_N02A07c3
• SG2.B8_N02A11c5
• SG2.D8_N02A07c5
• SG6D.T8_N11A03cy.3
• SG6.D8_N5A09cy.5
• SG7.T8C_N11A07cy.3
• SG7.T8B_N11A06cy.3
• SG7.T8D_N11A08cy.3
• SG.ISB.3.8B_N30A05cy.3
• SG2.B9_N02A12c5
• SG2.D9_N02A08c5
• SG6.C11_N5A12cy.5
• SG6.B11_N5A11cy.5
• SG6.A11_N5A10cy.5
• SG7.T12D_N11A12cy.3
• SG7.T12C_N11A11cy.3
• SG12.C120_N32A12cy.5
• SG12.B120_N32A04cy.5
• SG12.A120_N32A08cy.3
• SG.ISB.3.12A_N30A06cy.5
• SG.ISB.3.12B_N30A07cy.3
• SG.ISB.3.12D_N30A08cy.3
• SG6.B14_N8A11cy.5
• SG6.C14_N8A12cy.5
• SG6D.T14_N11A04cy.3
• A00470_Q1_t30_diamide
• A00437_Q2_t60_diamide
• A00436_Q2_t60_diamide
• A00436_Q3_t90_diamide
• Mtm.0.2ug.mL.vs.ctrl.8h.1.y
• Mtm.0.2ug.mL.vs.ctrl.8h.2.y
• Mtm.0.2ug.mL.vs.ctrl.12h.1.y