Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0032
• Rv0034
• Rv0089
• Rv0093c
• Rv0095c
• Rv0096
• Rv0099
• Rv0101
• Rv0152c
• Rv0160c
• Rv0210
• Rv0228
• Rv0319
• Rv0368c
• Rv0371c
• Rv0373c
• Rv0375c
• Rv0388c
• Rv0776c
• Rv0943c
• Rv0966c

Bicluster Conditions

• H37Rv..7H9.roll.replicate.4.x
• H37Rv..7H9.shake.replicate.3
• H37Rv..Sauton.s.media.replicate.2
• H37Rv..Sauton.s.media.replicate.4
• H37Rv.Day.0.rep.1
• MTB1254.Day.0.rep.1
• MTB1254.Day.0.rep.2
• MTB1254.Day.0.rep.3
• MTB1254.vs..MTB1254.rep1
• H37Rv.Day.0.rep.2
• H37Rv.Day6.1
• H37Rv.Day6.2
• H37Rv.Day8.1
• H37Rv.Day8.2
• H37Rv.Day14.1
• H37Rv.Day24.1
• H37Rv.Day60.1
• H37Rv.Day60.2
• H37Rv.Day60.3
• X0.1ug.mL.Mtmvsctrl..1.5h..x
• X0.2ug.mL.Mtmvsctrl..0.33h..x
• X0.2ug.mL.Mtmvsctrl..0.75h..x
• X0.2ug.mL.Mtmvsctrl..1.5h..x
• X0.2ug.mL.Mtmvsctrl..2h..x
• X0.2ug.mL.Mtmvsctrl..2h.C.x
• X0.2ug.mL.Mtmvsctrl..4h.A.x
• X0.2ug.mL.Mtm.ctrl..4h...1.x
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
• AA_30uM_10.min_04
• AA_30uM_10.min_06
• AA_30uM_10.min_07
• AA_30uM_10m_01
• AA_30uM_10min_02
• AA_30uM_10min_03
• AA_30uM_1h_01
• AA_30uM_1h_02
• AA_30uM_1h_05
• AA_30uM_1h_06
• AA_30uM_1h_07
• AA_30uM_1h_08
• AA_30uM_24h_02
• AA_30uM_24h_03
• AA_30uM_24h_04
• AA_30uM_2h_01
• AA_30uM_2h_06
• AA_30uM_2h_09
• AA_30uM_30min_01
• AA_30uM_30min_04
• AA_30uM_30min_05
• AA_30uM_30min_07
• AA_30uM_30min_08
• AA_30uM_30min_09
• AA_30uM_4h_02
• AA_30uM_4h_03
• AA_30uM_4h_04
• AA_30uM_4h_06
• AA_30uM_4h_09
• AA_3uM_10.min_01
• Acetate.3mM.10m.03
• Acetate.3mM.10m.06
• Acetate.3mM.10m.07
• Acetate.3mM.2h.04
• Acetate.3mM.2h.05
• Acetate.3mM.2h.06
• Acetate.3mM.30m.02
• Acetate.3mM.30m.04
• Acetate.3mM.30m.05
• Acetate.3mM.30m.06
• Acetate.3mM.30m.08
• Acetate.3mM.60m.01
• Acetate.3mM.60m.03
• Acetate.3mM.60m.04
• L2A_30uM_10min_01
• L2A_30uM_10min_03
• L2A_30uM_10min_04
• L2A_30uM_10min_05
• L2A_30uM_10min_08
• L2A_30uM_1h_02
• L2A_30uM_1h_03
• L2A_30uM_1h_05
• L2A_30uM_1h_08
• L2A_30uM_1h_09
• L2A_30uM_2h_04
• L2A_30uM_30min_03
• L2A_30uM_30min_04
• L2A_30uM_30min_07
• L2A_30uM_4h_03
• L2A_30uM_4h_05
• L2A_30uM_4h_07
• L2A_30uM_4h_08
• LAA_50uM_10min_01
• LAA_50uM_10min_02
• OA_50uM_10min_02
• OA_50uM_10min_03
• OA_50uM_10min_04
• OA_50uM_10min_06
• OA_50uM_10min_07
• OA_50uM_10min_08
• OA_50uM_1h_01
• OA_50uM_1h_08
• OA_50uM_1h_10
• OA_50uM_2h_05
• OA_50uM_2h_06
• OA_50uM_2h_07
• OA_50uM_30min_04
• OA_50uM_30min_07
• OA_50uM_30min_08
• OA_50uM_4h_01
• OA_50uM_4h_04
• OA_50uM_4h_05
• OA_50uM_4h_06
• OA_50uM_4h_07
• PA_100uM_24h_01
• PA_100uM_2h_04
• PA_50uM_10min_01
• PA_50uM_10min_08
• PA_50uM_10min_09
• PA_50uM_10min_10
• PA_50uM_12h_01
• PA_50uM_12h_02
• PA_50uM_12h_03
• PA_50uM_12h_04
• PA_50uM_12h_05
• PA_50uM_12h_06
• PA_50uM_1h_03
• PA_50uM_1h_04
• PA_50uM_1h_06
• PA_50uM_1h_09
• PA_50uM_1h_10
• PA_50uM_1h_11
• PA_50uM_24h_06
• PA_50uM_24h_07
• PA_50uM_24h_08
• PA_50uM_2h_02
• PA_50uM_2h_04
• PA_50uM_2h_06
• PA_50uM_2h_07
• PA_50uM_2h_08
• PA_50uM_30.min_05
• PA_50uM_30.min_06
• PA_50uM_30.min_07
• PA_50uM_30min_01
• PA_50uM_30min_02
• PA_50uM_30min_03
• PA_50uM_30min_08
• PA_50uM_30min_09
• PA_50uM_30min_10
• PA_50uM_30min_11
• PA_50uM_3d_02
• PA_50uM_3d_03
• PA_50uM_4h
• PA_50uM_4h_01
• PA_50uM_4h_03
• PA_50uM_4h_05
• PA_50uM_4h_07
• PA_50uM_8h_02
• PA_50uM_8h_03
• PA_50uM_8h_04
• Starvation_1254_12h_02
• Starvation_1254_12h_03
• Starvation_1254_24h_02
• Starvation_1254_24h_03
• Starvation_1254_24h_05
• Starvation_1254_24h_06
• Starvation_1254_24h_07
• Starvation_1254_24h_08
• Starvation_1254_3d_03
• Starvation_1254_5d_01
• Starvation_1254_5d_02
• Starvation_1254_5d_03
• Starvation_1254_5d_04
• Starvation_1254_6h_02
• Starvation_1254_6h_03
• Starvation_1254_6h_04
• Starvation_1254_6h_06
• Starvation_1254_6h_07
• Starvation_1254_OA50_12h_02
• Starvation_1254_OA50_12h_03
• Starvation_1254_OA50_12h_04
• Starvation_1254_OA50_24h_01
• Starvation_1254_OA50_24h_02
• Starvation_1254_OA50_24h_03
• Starvation_1254_OA50_24h_04
• Starvation_1254_OA50_3d_01
• Starvation_1254_OA50_3d_02
• Starvation_1254_OA50_3d_03
• Starvation_1254_OA50_3d_04
• Starvation_1254_OA50_5d_02
• Starvation_1254_OA50_5d_03
• Starvation_1254_OA50_5d_04
• Starvation_1254_OA50_6h_02
• Starvation_1254_PA50_24h_01
• Starvation_1254_PA50_24h_02
• Starvation_1254_PA50_24h_03
• Starvation_1254_PA50_24h_04
• Starvation_1254_PA50_6h_02
• Starvation_1254_PA50_6h_03
• Starvation_OA50_24h_01
• Starvation_OA50_24h_03
• Starvation_OA50_24h_04
• Starvation_OA50_6h_04
• H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.1
• H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.2
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.ctrl.vs.ctrl.at.0.hr.rep.2
• M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
• MTB.in.Wild.type.macrophages.for.4hrs
• MTB.in.Wild.type.macrophages...IFNg.for.24hrs
• MTB.in.Wild.type.macrophages...IFNg.for.48hrs
• Russell_Lab_Spotted_Oligos_1.2..14.day.resting.macrophage.infection.2hr..rep.2..Russell_Lab_Spotted_Oligos_1.2..
• Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
• Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
• Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
• Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
• Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
• Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
• Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
• wild.type..mc.2.6020...biological.rep2
• X20ug.mL.Prcp.6776.DMSO..6h..1
• X40ug.mLProcept6778vsDMSO.6h
• X40ug.mLProcept6778vsDMSO.6hA
• X0.2ug.mL..111891.DMSO..5.5h..1
• X0.2ug.mL..111891.DMSO..5.5h..2
• X0.2ug.mL..111891.DMSO..5.5h..3
• X1.ug.mL..111891vsDMSO..6h
• X1ug.mL..111895vsDMSO..6h
• X1ug.mL..111895vsDMSO..6hA
• X2ug.mL..111895vsDMSO..6h
• X2ug.mL..111895vsDMSO..6hA
• X1ug.mL..124196vsDMSO..6h
• X50ug.mL.PA.1vsDMSO..6h
• X0.2ug.mL.PA824.DMSO..6h..1
• X0.2ug.mL.PA824.DMSO..6h..2
• X0.4ug.mL.PA824.DMSO..6h..1
• X0.4ug.mL.PA824.DMSO..6h..2
• X0.4ug.mL.PA824.DMSO..6h..3
• X0.4ug.mL.PA824.DMSO..6h..4
• X2ug.mL.PA824.DMSO..6h..1
• X2ug.mL.PA824.DMSO..6h..2
• X0.2ug.mL.Mtmvsctrl..2h..y
• X0.2ug.mL.Mtmvsctrl..2h.A.y
• X0.2ug.mL.Mtmvsctrl..2h.B.y
• X0.2ug.mL.Mtmvsctrl..2h.C.y
• X0.2ug.mL.Mtmvsctrl..4h.A.y
• X0.2ug.mL.Mtmvsctrl..4h.B.y
• X0.2ug.mL.Mtm.ctrl..4h...1.y
• X0.2ug.mL.Mtm.ctrl..4h...2.y
• X0.2ug.mL.Mtmvsctrl..6h..y
• X100uM.DipyridylvsCtrl..6hA
• X100uM.Dipyridylvsctrl..6h
• X1mM.DTNBvsDMSO..6h
• X2mM.DTNBvsDMSO
• X10ug.mL.methoxatinvsDMSO..6h.A
• X10ug.mLMethoxatinvsDMSO.6h
• X20ug.mL.methoxatinvsDMSO..6h
• X2mMb.mercaptoethanolvsDMSO.6h
• X9ug.mLAscidideminNpvsDMSO.6hA
• X5ug.mL.OfloxvsEtOH..6hA
• X10ug.mL.OfloxvsDMSO..6h
• X50ug.mL.VerapamilvsDMSO..6h
• X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1
• X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
• X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.1
• X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.x
• X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3
• X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.y
• MTB.at.T0..biological.rep1
• MTB.at.T0..biological.rep4
• MTB.at.T30..biological.rep1
• MTB.at.T30..biological.rep2
• MTB.at.T30..biological.rep3
• MTB.at.T60..biological.rep1
• MTB.at.T60..biological.rep2
• MTB.at.T180..biological.rep2
• MTB.at.T180..biological.rep3
• MTB.at.T180..biological.rep4
• MTB.at.T360..biological.rep1
• MTB.at.T360..biological.rep2