Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0177
• Rv0436c
• Rv0498
• Rv0502
• Rv0544c
• Rv0879c
• Rv1018c
• Rv1248c
• Rv1408
• Rv1498c
• Rv1649
• Rv2128
• Rv2290
• Rv2494
• Rv3100c
• Rv3152
• Rv3320c
• Rv3362c
• Rv3706c

Bicluster Conditions

• H37Rv..7H9.roll.replicate.4.x
• H37Rv..7H9.shake.replicate.2
• H37Rv..7H9.shake.replicate.3
• H37Rv..7H9.shake.replicate.4
• H37Rv..7H9.roll.replicate.2.y
• H37Rv.Day.0.rep.1
• MTB1254.Day.0.rep.2
• MTB1254.vs..MTB1254.rep1
• MTB1254.vs..MTB1254.rep2
• MTB1254.vs..MTB1254.rep3
• MTB1254.vs..MTB1254.rep4
• MTB1254.vs..MTB1254.rep5
• MTB1254.vs..MTB1254.rep6
• H37Rv.Day.0.rep.2
• H37Rv.Day.0.rep.3
• H37Rv.Day6.1
• H37Rv.Day6.2
• H37Rv.Day6.3
• H37Rv.Day8.1
• H37Rv.Day14.2
• H37Rv.Day24.2
• H37Rv.Day24.3
• X0.1ug.mL.Mtmvsctrl..0.33h..x
• X0.1ug.mL.Mtmvsctrl..0.75h..x
• X0.1ug.mL.Mtmvsctrl..1.5h..x
• X0.2ug.mL.Mtmvsctrl..0.75h..x
• X0.2ug.mL.Mtmvsctrl..1.5h..x
• X0.2ug.mL.Mtmvsctrl..2h.A.x
• X0.2ug.mL.Mtmvsctrl..4h.A.x
• X0.2ug.mL.Mtmvsctrl..4h.B.x
• X0.2ug.mL.Mtmvsctrl..6h..x
• Succinate.7H9.based.medium..2
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
• AA_10uM_10.min_01
• AA_30uM_10.min_04
• AA_30uM_10.min_05
• AA_30uM_10.min_06
• AA_30uM_10.min_07
• AA_30uM_10min_02
• AA_30uM_1h_08
• AA_30uM_24h_02
• AA_30uM_24h_03
• AA_30uM_24h_04
• AA_30uM_2h_01
• AA_30uM_2h_02
• AA_30uM_2h_04
• AA_30uM_2h_09
• AA_30uM_30min_01
• AA_30uM_30min_02
• AA_30uM_30min_05
• AA_30uM_30min_07
• AA_30uM_30min_08
• AA_30uM_30min_09
• AA_30uM_4h_01
• AA_30uM_4h_02
• AA_30uM_4h_03
• AA_30uM_4h_04
• AA_30uM_4h_05
• AA_30uM_4h_06
• AA_30uM_4h_07
• AA_30uM_4h_08
• AA_30uM_4h_09
• AA_3uM_10.min_01
• AA_60uM_24h_01
• AA_60uM_24h_02
• AA_60uM_24h_03
• aceatate.induction.2
• aceatate.induction.3
• Acetate.3mM.10m.02
• Acetate.3mM.10m.07
• Acetate.3mM.10m_04
• Acetate.3mM.2h.01
• Acetate.3mM.2h.02
• Acetate.3mM.2h.05
• Acetate.3mM.2h.06
• Acetate.3mM.30m.01
• Acetate.3mM.30m.04
• Acetate.3mM.30m.07
• Acetate.3mM.60m.04
• L2A_30uM_10min_01
• L2A_30uM_10min_03
• L2A_30uM_10min_04
• L2A_30uM_10min_06
• L2A_30uM_10min_07
• L2A_30uM_1h_03
• L2A_30uM_1h_07
• L2A_30uM_1h_08
• L2A_30uM_2h_01
• L2A_30uM_2h_05
• L2A_30uM_30min_05
• L2A_30uM_30min_07
• L2A_30uM_4h_03
• L2A_30uM_4h_04
• L2A_30uM_4h_06
• L2A_30uM_4h_07
• LAA_50uM_10min_01
• LAA_50uM_10min_02
• OA_50uM_10min_02
• OA_50uM_10min_03
• OA_50uM_10min_04
• OA_50uM_10min_05
• OA_50uM_10min_06
• OA_50uM_10min_07
• OA_50uM_10min_08
• OA_50uM_1h_01
• OA_50uM_1h_02
• OA_50uM_1h_03
• OA_50uM_1h_07
• OA_50uM_1h_08
• OA_50uM_1h_10
• OA_50uM_24h_03
• OA_50uM_24h_04
• OA_50uM_24h_05
• OA_50uM_24h_06
• OA_50uM_2h_01
• OA_50uM_2h_04
• OA_50uM_2h_10
• OA_50uM_30min_01
• OA_50uM_30min_04
• OA_50uM_30min_07
• OA_50uM_30min_08
• OA_50uM_30min_09
• OA_50uM_4h_01
• OA_50uM_4h_04
• OA_50uM_4h_05
• OA_50uM_4h_06
• OA_50uM_4h_07
• OA_50uM_4h_08
• PA_100uM_2h_03
• PA_50uM_10.min_03
• PA_50uM_10min_06
• PA_50uM_10min_10
• PA_50uM_12h_01
• PA_50uM_12h_03
• PA_50uM_12h_05
• PA_50uM_12h_06
• PA_50uM_1h_01
• PA_50uM_1h_02
• PA_50uM_1h_04
• PA_50uM_1h_06
• PA_50uM_1h_07
• PA_50uM_1h_08
• PA_50uM_1h_09
• PA_50uM_1h_10
• PA_50uM_1h_11
• PA_50uM_1h_12
• PA_50uM_24h_01
• PA_50uM_24h_02
• PA_50uM_24h_04
• PA_50uM_24h_06
• PA_50uM_24h_08
• PA_50uM_24h_10
• PA_50uM_2h_04
• PA_50uM_30.min_04
• PA_50uM_30.min_06
• PA_50uM_30.min_07
• PA_50uM_30min_01
• PA_50uM_30min_03
• PA_50uM_30min_09
• PA_50uM_30min_10
• PA_50uM_3d_02
• PA_50uM_3d_03
• PA_50uM_3d_04
• PA_50uM_3d_05
• PA_50uM_3d_06
• PA_50uM_4h_01
• PA_50uM_4h_02
• PA_50uM_4h_04
• PA_50uM_8h_01
• PA_50uM_8h_02
• PA_50uM_8h_03
• PA_50uM_8h_04
• PA_50uM_8h_05
• PA_50uM_8h_06
• Starvation_1254_12h_02
• Starvation_1254_24h_01
• Starvation_1254_24h_05
• Starvation_1254_6h_02
• Starvation_1254_OA50_12h_01
• Starvation_1254_OA50_12h_03
• Starvation_1254_OA50_12h_04
• Starvation_1254_OA50_24h_03
• Starvation_1254_OA50_3d_01
• Starvation_1254_OA50_3d_04
• Starvation_1254_OA50_6h_01
• Starvation_1254_PA50_24h_01
• Starvation_1254_PA50_6h_02
• Starvation_OA50_6h_01
• Starvation_OA50_6h_02
• H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.2
• H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3
• CDC1551.Ctrl.vs.H37Rv.rep.2
• CDC1551.Ctrl.vs.H37Rv.rep.3
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.ctrl.vs.ctrl.at.0.hr.rep.1
• BCG.2hr.phagosomal.profile
• BCG.24hr.phagosomal.profile
• M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
• M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
• MTB.in.Wild.type.macrophages.for.4hrs
• MTB.in.Wild.type.macrophages.for.24hrs
• MTB.in.Wild.type.macrophages.for.48hrs
• MTB.in.Wild.type.macrophages...IFNg.for.4hrs
• Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
• Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
• Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
• Russell_Lab_Spotted_Oligos_1.7..14.day.resting.macrophage.infection.Day.6..rep.1..Russell_Lab_Spotted_Oligos_1.7..
• Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
• Russell_Lab_Spotted_Oligos_1.10.14.day.resting.macrophage.infection.Day.8..rep.2..Russell_Lab_Spotted_Oligos_1.10.
• Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
• Russell_Lab_Spotted_Oligos_1.13.14.day.resting.macrophage.infection.Day.12..rep.1..Russell_Lab_Spotted_Oligos_1.13.
• Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
• Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
• Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
• SS_A1_RV.1
• SS_A1_RV.2
• SS_A1_RV.3
• X20ug.mL.Procept.6776vsDMSO..6h
• X30ug.mLProcept6776vsDMSO.6h
• X0.2ug.mL..111891.DMSO..5.5h..1
• X0.5ug.mL..111891vsDMSO.6hA
• X1ug.mL..111891vsDMSO..6h
• X2ug.mL..111891vsDMSO..6h
• X1ug.mL..111891.DMSO..12h..1
• X0.5ug.mL..111895vsDMSO..6h
• X0.5ug.mL..111895vsDMSO.6h
• X1ug.mL..111895vsDMSO..6h
• X1ug.mL..111895vsDMSO..6hA
• X0.5ug.mL..121940vsDMSO.6hA
• X2ug.mL..121940vsDMSO..6h
• X2ug.mL..121940vsDMSO..6hA
• X0.5ug.mL..124196vsDMSO..6h
• X0.5ug.mL..124196vsDMSO..6hA
• X1ug.mL..124196vsDMSO..6h
• X1ug.mL..124196vsDMSO..6hA
• X10ug.mL.PA.1vsDMSO..6hA
• X10ug.mL.PA.1vsDMSO..6hB
• X50ug.mL.PA.1vsDMSO..6h
• X10ug.mL.PA.21vsDMSO..6hA
• X50ug.mL.PA.21vsDMSO..6h
• X50ug.mL.PA.21vsDMSO..6hA
• X0.2ug.mL.PA824.DMSO..6h..1
• X0.1ug.mL.Mtmvsctrl..0.33h..y
• X0.1ug.mL.Mtmvsctrl..0.75h..y
• X0.1ug.mL.Mtmvsctrl..1.5h..y
• X0.2ug.mL.Mtmvsctrl..0.33h..y
• X0.2ug.mL.Mtmvsctrl..0.75h..y
• X0.2ug.mL.Mtmvsctrl..1.5h..y
• X0.2ug.mL.Mtmvsctrl..2h.C.y
• X0.2ug.mL.Mtmvsctrl..4h.B.y
• X0.2ug.mL.Mtm.ctrl..4h...2.y
• X50ug.mLAntimycinAvsDMSO..6hA
• X50ug.mLAntimycinAvsDMSO..6hB
• X200uM.Dipyridylvsctrl..6hA
• X150uM.Deferroxaminevsctrl..6hA
• X150uM.Deferroxaminevsctrl..6hB
• X250uM.DeferroxaminevsDMSO..6h
• X10ug.mL.LevovsEtOH..6h
• X10ug.mL.Nvb.DMSO..6h..1
• X10ug.mL.Nvb.DMSO..6h..3
• X5ug.mL.OfloxvsEtOH..6h
• X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1
• X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3
• X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4
• MTB.at.T0..biological.rep3
• MTB.at.T0..biological.rep4
• MTB.at.T30..biological.rep2
• MTB.at.T60..biological.rep2
• MTB.at.T180..biological.rep2
• MTB.at.T180..biological.rep4
• MTB.at.T360..biological.rep2