Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0854
• Rv1017c
• Rv1827
• Rv2297
• Rv2375
• Rv2521
• Rv2715
• Rv2722
• Rv2773c
• Rv2949c
• Rv3339c
• Rv3390
• Rv3407
• Rv3408
• Rv3583c
• Rv3719
• Rv3755c
• Rv3846

Bicluster Conditions

• H37Rv..7H9.roll.replicate.1.x
• H37Rv..7H9.roll.replicate.2.x
• H37Rv..7H9.roll.replicate.3.x
• H37Rv..7H9.roll.replicate.4.x
• H37Rv..7H9.shake.replicate.1
• H37Rv..7H9.shake.replicate.4
• H37Rv..Dubos.media.replicate.1
• H37Rv..Dubos.media.replicate.2
• H37Rv..Dubos.media.replicate.3
• H37Rv..Sauton.s.media.replicate.1
• H37Rv..Sauton.s.media.replicate.2
• H37Rv..Sauton.s.media.replicate.4
• H37Rv..Youman.media.replicate.1
• H37Rv..Youman.media.replicate.2
• H37Rv..Youman.media.replicate.3
• H37Rv.Day.0.rep.1
• MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.1
• MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2
• MTB1254.Day.0.rep.1
• MTB1254.Day.0.rep.2
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.2
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.3
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.4
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.6
• MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1
• MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2
• High.iron.wt.vs.low.iron.wt.1b
• High.iron.wt.vs.low.iron.wt.2a
• High.iron.wt.vs.low.iron.wt.2b
• High.iron.wt.vs.low.iron.wt.3a
• MTB1254.vs..MTB1254.rep1
• MTB1254.vs..MTB1254.rep2
• MTB1254.vs..MTB1254.rep5
• MTB1254.vs..MTB1254.rep6
• H37Rv.hypoxia.2hr.rep.2
• H37Rv.hypoxia.2hr.rep.4
• H37Rv.hypoxia.2hr.rep.6
• H37Rv.0.2..Oxygen..2h..1
• H37Rv.0.2..Oxygen..2h..4
• H37Rv.0.2..Oxygen..2h..5
• H37Rv.0.2..Oxygen..2h..6
• H37Rv.Day.0.rep.2
• H37Rv.Day6.1
• H37Rv.Day6.2
• H37Rv.Day6.3
• H37Rv.Day8.1
• H37Rv.Day8.2
• H37Rv.Day14.2
• H37Rv.Day24.1
• H37Rv.Day24.2
• H37Rv.Day24.3
• H37Rv.Day60.2
• H37Rv.Day60.3
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4
• NRP.Day6..2
• NRP.Day8..1
• NRP.Day8..3
• NRP.Day10..1
• NRP.Day10..3
• NRP.Day12..1
• NRP.Day12..2
• NRP.Day12..3
• NRP.Day14..1
• NRP.Day14..2
• NRP.Day14..4
• NRP.Day14..5
• NRP.Day14..6
• NRP.Day14..7
• NRP.Day14..8
• NRP.Day14..9
• NRP.Day20..2
• WT.t.6h.WT.t.0h..1
• WT.t.6h.WT.t.0h..2
• pH4.8vspH6.8..2h.B
• pH4.8vspH6.8..4h.
• pH4.8vspH6.8..4h.A
• pH4.8vspH6.8..4h.C
• pH4.8vspH6.8..5.5h.
• pH4.8vspH6.8..6h.
• pH4.8vspH6.8..7h.
• pH4.8vspH6.8..11h.
• pH5.2vspH6.8..5.5h.
• pH5.6vspH6.8..2h.
• pH5.6vspH6.8..4h.B
• pH5.6vspH6.8..5h.
• pH5.6vspH6.8..11h.
• X4mM.H2O2.ctrl..2h...2
• H2O2.4mM.vs.ctrl.8h.1
• Succinate.7H9.based.medium..1
• Succinate.7H9.based.medium..2
• H37Rv.hypoxia.4hr.rep.1
• H37Rv.hypoxia.4hr.rep.2
• H37Rv.hypoxia.4hr.rep.6
• H37Rv.hypoxia.1.day.rep.10
• H37Rv.diamide.1h.rep.1
• H37Rv.diamide.1h.rep.2
• H37Rv.diamide.1h.rep.3
• H37Rv.diamide.1h.rep.4
• H37Rv.diamide.1h.rep.5
• H37Rv.diamide.1h.rep.6
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
• aceatate.induction.1
• aceatate.induction.2
• Acetate.3mM.10m.06
• Acetate.3mM.2h.01
• Acetate.3mM.2h.03
• Acetate.3mM.30m.05
• Acetate.3mM.30m.06
• Acetate.3mM.60m.02
• Acetate.3mM.60m.04
• CHP_25uM_2h_01
• Starvation_1254_12h_01
• Starvation_1254_24h_01
• Starvation_1254_3d_01
• Starvation_1254_3d_02
• Starvation_1254_3d_03
• Starvation_1254_3d_04
• Starvation_1254_5d_04
• Starvation_1254_6h_01
• Starvation_1254_6h_02
• Starvation_1254_6h_07
• Starvation_1254_6h_08
• Starvation_1254_OA50_3d_01
• Starvation_1254_OA50_3d_04
• Starvation_1254_OA50_6h_01
• Starvation_1254_OA50_6h_04
• Starvation_1254_PA50_24h_01
• Starvation_1254_PA50_24h_02
• Starvation_1254_PA50_6h_02
• Starvation_1254_PA50_6h_03
• Starvation_OA50_24h_04
• Starvation_OA50_6h_01
• Starvation_OA50_6h_02
• Starvation_OA50_6h_03
• Starvation_OA50_6h_04
• H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.2
• H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3
• H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.2
• CDC1551.Ctrl.vs.H37Rv.rep.1
• CDC1551.ctrl.vs.ctrl.at.0.hr.rep.1
• CDC1551.ctrl.vs.ctrl.at.0.hr.rep.2
• Mtb.response.to.pH.5.5..6.replicates.
• Mtb.response.to.pH.6.5..6.replicates.
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.1
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.1
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.2
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.3
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.5
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.6
• SG2.B0_N02A09c3
• SG6.H0_N5A03cy.5
• SG6_B0_N7A10cy.5
• SG7.CT0_N11A03cy.5
• SG7.DT0_N11A04cy.5
• SG8.A.Day.0.pre_fix_N37A04cy.5
• SG8.B.Day.0.pre_N37A12cy.3
• SG8.D.Day.0.pre_N27A10cy.3
• SG8.C.Day.0.post_N37A10cy.5
• SG8.D.Day.0.post_N27A11cy.3
• SG.ISB.3.0A_N30A01cy.3
• SG.ISB.3.0C_N30A02cy.3
• SG8.D.Day.1_N27A12cy.3
• SG8.B.Day.1_N37A05cy.5
• SG7.DT1_N11A08cy.5
• SG7.CT1_N11A07cy.5
• SG7.BT1_N11A06cy.5
• SG6_B1_N7A11cy.5
• SG2.D1_N02A02c5
• SG2.B1_N02A10c3
• SG2.A1_N02A02c3
• SG8.B.Day.2_N37A06cy.5
• SG2.A2_N02A03c3
• SG2.D2_N02A03c5
• SG2.A3_N02A04c3
• SG2.B3_N02A12c3
• SG2.D3_N02A04c5
• SG2.B5_N02A09c5
• SG2.D7_N02A06c5
• SG2.B7_N02A10c5
• SG2.A7_N02A06c3
• SG6_B7_N7A12cy.5
• SG6_A7_N7A12cy.3
• SG7.T7C_N11A10cy.5
• SG7.T7D_N11A11cy.5
• SG.ISB.3.7B_N30A03cy.3
• SG.ISB.3.7C_N30A03cy.5
• SG12.C0_N32A05cy.5
• SG12.B0_N32A09cy.3
• SG12.A0_N32A01cy.3
• SG12.A4_N32A04cy.3
• SG12.C4_N32A08cy.5
• SG12.C6_N32A09cy.5
• SG12.A8_N32A06cy.3
• SG12.B8_N32A02cy.5
• SG12.C8_N32A10cy.5
• SG12.C24_N32A11cy.5
• SG12.B24_N32A03cy.5
• SG2.A8_N02A07c3
• SG2.B8_N02A11c5
• SG2.D8_N02A07c5
• SG6D.T8_N11A03cy.3
• SG6.A8_N5A06cy.5
• SG7.T8C_N11A07cy.3
• SG7.T8B_N11A06cy.3
• SG7.T8D_N11A08cy.3
• SG.ISB.3.8A_N30A04cy.5
• SG2.A9_N02A08c3
• SG2.B9_N02A12c5
• SG2.D9_N02A08c5
• SG7.T12D_N11A12cy.3
• SG7.T12C_N11A11cy.3
• SG7.T12B_N11A10cy.3
• SG7.T12A_N11A09cy.3
• SG12.B120_N32A04cy.5
• SG12.A120_N32A08cy.3
• SG.ISB.3.12A_N30A06cy.5
• SG.ISB.3.12B_N30A07cy.3
• SG.ISB.3.12C_N30A07cy.5
• SG6.A14_N8A10cy.5
• SG6.C14_N8A12cy.5
• SG6D.T14_N11A04cy.3
• SS_A1_RV.1
• SS_A1_RV.2
• wild.type..mc.2.6020...biological.rep1
• A00470_Q1_t30_diamide
• A00470_Q2_t60_diamide
• A00470_Q3_t90_diamide
• A00437_Q1_t30_diamide
• A00437_Q2_t60_diamide
• A00437_Q3_t90_diamide
• A00436_Q1_t30_diamide
• A00436_Q2_t60_diamide