Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0031
• Rv0078
• Rv0159c
• Rv0280
• Rv0454
• Rv0872c
• Rv0941c
• Rv1066
• Rv1266c
• Rv1403c
• Rv1706c
• Rv1744c
• Rv2879c
• Rv3018c
• Rv3125c
• Rv3243c
• Rv3902c
• Rv3903c
• Rv3917c

Bicluster Conditions

• Strain.CDC1551..replicate.1
• Strain.CDC1551..replicate.4
• Strain.1006...replicate.1
• Strain.1006...replicate.2
• Strain.1006...replicate.3
• Strain.1006...replicate.4
• Strain.1254...replicate.1
• Strain.1843..replicate.1
• Strain.1843..replicate.4
• Strain.3160..replicate.2
• Strain.9700665..replicate.1
• Strain.9700665..replicate.2
• Strain.9700665..replicate.3
• Strain.9700665..replicate.4
• Strain.9802501..replicate1
• Strain.9802501..replicate.2
• Strain.9802501..replicate.4
• Strain.9802826..replicate.1
• Strain.9802826..replicate.2
• Strain.9802826..replicate.3
• Strain.9802826..replicate.4
• Strain.M3061a..replicate.2
• Strain.M3061a..replicate.3
• H37Rv.Vs.M.bovis.rep1
• H37Rv.Vs.M.bovis.rep3
• MTB.strain.1254.Ctrl.vs.high.aeration.rep3
• MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.3
• H37Rv.hypoxia.2hr.rep.1
• H37Rv.hypoxia.2hr.rep.2
• H37Rv.hypoxia.2hr.rep.3
• NRP.Day6..1
• NRP.Day6..2
• NRP.Day6..3
• NRP.Day8..1
• NRP.Day8..2
• NRP.Day8..3
• NRP.Day10..1
• NRP.Day10..2
• NRP.Day12..3
• NRP.Day14..1
• NRP.Day14..2
• NRP.Day14..3
• NRP.Day14..4
• NRP.Day14..5
• NRP.Day14..6
• NRP.Day14..7
• NRP.Day14..8
• NRP.Day20..1
• NRP.Day20..2
• NRP.Day30..1
• PBS.Tween.7H9
• H37Rv.hypoxia.4hr.rep.2
• H37Rv.hypoxia.4hr.rep.3
• H37Rv.hypoxia.4hr.rep.4
• H37Rv.hypoxia.4hr.rep.5
• H37Rv.hypoxia.4hr.rep.6
• H37Rv.hypoxia.4hr.rep.7
• H37Rv.hypoxia.8hr.rep.1
• H37Rv.hypoxia.8hr.rep.2
• H37Rv.hypoxia.12hr.rep.1
• H37Rv.hypoxia.12hr.rep.2
• H37Rv.hypoxia.1.day.rep.2
• H37Rv.hypoxia.1.day.rep.3
• H37Rv.hypoxia.1.day.rep.4
• H37Rv.hypoxia.1.day.rep.9
• H37Rv.hypoxia.4.day.rep.1
• H37Rv.hypoxia.4.day.rep.2
• H37Rv.hypoxia.4.day.rep.3
• H37Rv.hypoxia.4.day.rep.4
• H37Rv.hypoxia.4.day.rep.5
• H37Rv.hypoxia.4.day.rep.6
• H37Rv.hypoxia.4.day.rep.7
• H37Rv.hypoxia.7.day.rep.3
• H37Rv.hypoxia.7.day.rep.4
• H37Rv.hypoxia.7.day.rep.6
• H37Rv.hypoxia.7.day.rep.7
• H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
• H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
• H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
• Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
• Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
• Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
• Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
• Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
• Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
• Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
• Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
• H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2
• Whole.Lung.Surfactant.2hrs.rep.1
• Whole.Lung.Surfactant.2hrs.rep.3
• Whole.Lung.Surfactant.30min.rep.1
• Whole.Lung.Surfactant.30min.rep.2
• Whole.Lung.Surfactant.30min.rep.3
• Whole.Lung.Surfactant.30min.rep.4
• Whole.Lung.Surfactant.30min.rep.5
• Extracted.Lung.Surfactant.2hrs.rep.2
• Extracted.Lung.Surfactant.30min.rep.1
• Extracted.Lung.Surfactant.30min.rep.2
• Purified.Surfactant.Lipids.30min.rep.1
• Purified.Surfactant.Lipids.30min.rep.2
• Purified.Human.SP.A.Coated.2hrs.rep2
• Purified.Human.SP.A.Uncoated.2hrs.rep1
• X20ug.ml.KCN.vs.DMSO.6hrs.x
• Glucose_5mM_10min_01
• Glycerol_1.
• Glycerol_1._10M_01
• Glycerol_1._30M_01
• CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.3
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.1
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.4
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.2
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.4
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.5
• H37Rv.reaeration.for.1hrs.rep.2
• H37Rv.reaeration.for.1hrs.rep.3
• H37Rv.reaeration.for.1hrs.rep.4
• H37Rv.reaeration.for.1hrs.rep.5
• H37Rv.reaeration.for.1hrs.rep.6
• H37Rv.reaeration.for.4hrs.rep.1
• H37Rv.reaeration.for.4hrs.rep.2
• H37Rv.reaeration.for.4hrs.rep.3
• H37Rv.reaeration.for.4hrs.rep.5
• H37Rv.reaeration.for.4hrs.rep.6
• H37Rv.reaeration.for.6hrs.rep.5
• H37Rv.reaeration.for.12hrs.rep.1
• H37Rv.reaeration.for.12hrs.rep.2
• H37Rv.reaeration.for.12hrs.rep.3
• H37Rv.reaeration.for.24hrs.rep.1
• H37Rv.reaeration.for.24hrs.rep.2
• H37Rv.reaeration.for.24hrs.rep.4
• H37Rv.reaeration.for.24hrs.rep.5
• H37Rv.reaeration.for.24hrs.rep.6
• SG7.BT1_N11A06cy.5
• SG6.C1_N5A04cy.5
• SG8.B.Day.2_N37A06cy.5
• SG6C.T7_N11A01cy.3
• SG.ISB.3.7A_N30A02cy.5
• SG12.B6_N32A01cy.5
• SG12.C6_N32A09cy.5
• SG12.C8_N32A10cy.5
• SG12.C24_N32A11cy.5
• SG12.A24_N32A07cy.3
• SG2.A8_N02A07c3
• SG2.B8_N02A11c5
• SG6.D8_N5A09cy.5
• SG6.C8_N5A08cy.5
• SG7.T8D_N11A08cy.3
• SG.ISB.3.8B_N30A05cy.3
• SG7.T12C_N11A11cy.3
• SG7.T12A_N11A09cy.3
• SG.ISB.3.12A_N30A06cy.5
• hip.mutant.KL2801..biological.rep2
• hip.mutant.KL2849..biological.rep1
• hip.mutant.HTS1090..biological.rep2
• hip.mutant.HTS1105..biological.rep1
• hip.mutant.HTS1105..biological.rep2
• hip.mutant.HT1116..biological.rep1
• hip.mutant.HT1116..biological.rep2
• hip.mutant.HT1117..biological.rep1
• hip.mutant.HT1117..biological.rep2
• hip.mutant.HT1120..biological.rep2
• hip.mutant.HT1134..biological.rep1
• hip.mutant.HT1137..biological.rep1
• hip.mutant.HT1170..biological.rep1
• hip.mutant.HT1170..biological.rep2
• MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.3
• X0.1mMGSNO.10ug.mLmdvsDMSO.6h
• X0.1mMGSNO.20ug.mLCPZvsDMSO.6hA
• X25ug.mLCPZ.0.1mMGSNOvsDMSO.A
• X5ug.mL.CFZ.0.1mM.GSNO.DMSO..1
• X5ug.mL.CFZ.0.1mM.GSNO.DMSO..2
• X5ug.mLCFZ.0.1mMGSNOvsDMSO.A
• X0.1mMGSNO.5ug.mLKCNvsDMSO.6h.A
• X10ug.mL.EconazolevsEtOH..6h
• X24ug.mL.Econazole.DMSO..6h..2
• X10ug.mLchlorpromazinevsctrl.6h
• X10ug.mLchlorpromazinevsctrl.6hA
• X20ug.mL.chlorprmz.DMSO..6h..2
• X25ug.mL.CPZvsDMSO..6h.B
• X60ug.mL.ChlorprovsEtOH..6h
• X10ug.mL.clotrimvsEtOH..6h
• X24ug.mL.cltrmazole.DMS..6h..1
• X24ug.mL.cltrmazole.DMS..6h..2
• X10uM.CCCP.DMSO..6h
• X50uM.CCCP.DMSO..6h..2
• X50uM.CCCPvsDMSO..6h
• X0.5mM.DNP.DMSO..6h
• X2.5mM.Dinitrophenol.DMSO..6h
• X20uM.DCCD.DMSO..6h..1
• X20uM.DCCD.DMSO..6h..2
• X100uM.DCCD.DMSO..6h
• X2mM.DTTvsDMSO..6h
• X2mM.DTTvsDMSO..6h.A
• X5ug.mL.KCN.DMSO..6h..1
• X6ug.mL.MenadionevsDMSO..6h
• X10ug.mLmnd.Dubos.vsDMSO.6h
• X10ug.mLmdn.0.1mMGSNO.DMSO..2
• X50uM.NigericinvsDMSO..6h
• X50uM.NigericinvsDMSO..6h.A
• X10ug.mL.TRZ.DMSO..6h..1
• X10ug.mL.TRZ.DMSO..6h..2
• X25ug.mL.TRZ.DMSO..6h
• X50ug.mL.Thioridazine.DMSO..6h
• X2mM.ZnSO4.DMSO..6h
• H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep.1
• H37Rv.Ctrl.vs.10.ug.ml.garlic.extract.6hrs
• X20ug.ml.KCN.vs.DMSO.6hrs.y
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.1
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.1
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.2
• CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.2
• CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2