Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0743c
• Rv0953c
• Rv1027c
• Rv1239c
• Rv1467c
• Rv1529
• Rv1762c
• Rv1808
• Rv1865c
• Rv2107
• Rv2108
• Rv2252
• Rv2333c
• Rv2669
• Rv2821c
• Rv2822c
• Rv2823c
• Rv2910c
• Rv3453
• Rv3454
• Rv3892c

Bicluster Conditions

• High.iron.wt.vs.low.iron.wt.1a
• High.iron.wt.vs.low.iron.wt.1b
• High.iron.wt.vs.low.iron.wt.2a
• High.iron.wt.vs.low.iron.wt.2b
• High.iron.wt.vs.low.iron.wt.3a
• High.iron.wt.vs.low.iron.wt.3b
• H37Rv.hypoxia.2hr.rep.3
• H37Rv.hypoxia.2hr.rep.4
• NRP.Day6..1
• NRP.Day6..2
• NRP.Day6..3
• NRP.Day8..1
• NRP.Day8..2
• NRP.Day8..3
• NRP.Day10..1
• NRP.Day10..3
• NRP.Day12..3
• NRP.Day14..1
• NRP.Day14..2
• NRP.Day14..4
• NRP.Day14..9
• NRP.Day20..1
• NRP.Day20..2
• NRP.Day30..1
• pH4.8vspH6.8..2h.B
• pH4.8vspH6.8..4h.A
• pH4.8vspH6.8..4h.B
• pH4.8vspH6.8..5h.
• pH4.8vspH6.8..5.5h.
• pH4.8vspH6.8..7h.
• pH4.8vspH6.8..11h.
• pH5.2vspH6.8..2h.
• pH5.2vspH6.8..5h.
• pH5.6vspH6.8..2h.
• pH5.6vspH6.8..2h.A
• pH5.6vspH6.8..4h.
• pH5.6vspH6.8..5h.
• pH5.6vspH6.8..7h.
• pH5.6vspH6.8..11h.
• pH5.6vspH6.8..16h.
• H37Rv.hypoxia.4hr.rep.6
• H37Rv.hypoxia.4hr.rep.7
• H37Rv.hypoxia.8hr.rep.1
• H37Rv.hypoxia.8hr.rep.2
• H37Rv.hypoxia.8hr.rep.3
• H37Rv.hypoxia.12hr.rep.1
• H37Rv.hypoxia.12hr.rep.2
• H37Rv.hypoxia.12hr.rep.3
• H37Rv.hypoxia.1.day.rep.2
• H37Rv.hypoxia.1.day.rep.3
• H37Rv.hypoxia.1.day.rep.4
• H37Rv.hypoxia.1.day.rep.7
• H37Rv.hypoxia.1.day.rep.10
• H37Rv.hypoxia.4.day.rep.1
• H37Rv.hypoxia.4.day.rep.2
• H37Rv.hypoxia.4.day.rep.3
• H37Rv.hypoxia.4.day.rep.4
• H37Rv.hypoxia.4.day.rep.6
• H37Rv.hypoxia.4.day.rep.7
• H37Rv.hypoxia.7.day.rep.2
• H37Rv.hypoxia.7.day.rep.4
• H37Rv.hypoxia.7.day.rep.5
• H37Rv.hypoxia.7.day.rep.6
• H37Rv.hypoxia.7.day.rep.7
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
• Starvation_1254_OA50_12h_01
• Starvation_1254_OA50_12h_02
• Starvation_1254_OA50_24h_04
• Starvation_1254_OA50_3d_01
• Starvation_1254_OA50_6h_01
• Starvation_1254_PA50_24h_03
• Starvation_1254_PA50_24h_04
• Starvation_1254_PA50_6h_03
• Starvation_OA50_24h_01
• Starvation_OA50_24h_04
• Starvation_OA50_6h_01
• Starvation_OA50_6h_03
• Starvation_OA50_6h_04
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
• BCG.2hr.phagosomal.profile
• MTB.in.Wild.type.macrophages.for.4hrs
• MTB.in.Wild.type.macrophages...IFNg.for.24hrs
• MTB.in.Wild.type.macrophages...IFNg.for.48hrs
• Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
• Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
• Russell_Lab_Spotted_Oligos_1.4..14.day.resting.macrophage.infection.Day.2..rep.2..Russell_Lab_Spotted_Oligos_1.4..
• Russell_Lab_Spotted_Oligos_1.5..14.day.resting.macrophage.infection.Day.4..rep.1..Russell_Lab_Spotted_Oligos_1.5..
• Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
• Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
• Russell_Lab_Spotted_Oligos_1.11.14.day.resting.macrophage.infection.Day.10..rep.1..Russell_Lab_Spotted_Oligos_1.11.
• Russell_Lab_Spotted_Oligos_1.12.14.day.resting.macrophage.infection.Day.10..rep.2..Russell_Lab_Spotted_Oligos_1.12.
• Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
• SG2.B0_N02A09c3
• SG6.H0_N5A03cy.5
• SG6_B0_N7A10cy.5
• SG7.CT0_N11A03cy.5
• SG7.DT0_N11A04cy.5
• SG.ISB.3.0B_N30A01cy.5
• SG8.C.Day.1_N37A11cy.5
• SG8.C.Day.1_N27A09cy.3
• SG8.D.Day.1_N27A12cy.3
• SG8.B.Day.1_N37A05cy.5
• SG8.A.Day.1_fix_N37A03cy.5
• SG7.DT1_N11A08cy.5
• SG7.CT1_N11A07cy.5
• SG7.BT1_N11A06cy.5
• SG6_B1_N7A11cy.5
• SG6_A1_N7A11cy.3
• SG6.D1_N5A05cy.5
• SG6.C1_N5A04cy.5
• SG2.D1_N02A02c5
• SG2.B1_N02A10c3
• SG2.A1_N02A02c3
• SG8.A.Day.2_N37A08cy.3
• SG8.B.Day.2_N37A06cy.5
• SG2.A2_N02A03c3
• SG8.A.Day.5_N37A10cy.3
• SG2.D7_N02A06c5
• SG6D.T7_N11A02cy.3
• SG7.T7C_N11A10cy.5
• SG7.T7D_N11A11cy.5
• SG12.A1_N32A02cy.3
• SG12.B1_N32A10cy.3
• SG12.C1_N32A06cy.5
• SG12.A4_N32A04cy.3
• SG12.B6_N32A01cy.5
• SG12.A8_N32A06cy.3
• SG2.D8_N02A07c5
• SG6D.T8_N11A03cy.3
• SG6.D8_N5A09cy.5
• SG.ISB.3.8A_N30A04cy.5
• SG2.A9_N02A08c3
• SG2.B9_N02A12c5
• SG6.D11_N8A09cy.5
• SG7.T12C_N11A11cy.3
• SG6.B14_N8A11cy.5
• WT_140mM_NaCl_Rep3
• WT_140mM_NaCl_Rep4