Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0181c
• Rv0184
• Rv0185
• Rv0605
• Rv0606
• Rv0829
• Rv0922
• Rv1277
• Rv1278
• Rv1638
• Rv1833c
• Rv2719c
• Rv2736c
• Rv2737c
• Rv2789c
• Rv2790c
• Rv2791c
• Rv2792c
• Rv2977c
• Rv2988c
• Rv3198c
• Rv3586
• Rv3827c
• Rv3828c

Bicluster Conditions

• H37Rv.0.05..SDS.exposure.for.1h.rep.1
• H37Rv.0.05..SDS.exposure.for.1h.rep.4
• H37Rv.0.05..SDS.exposure.for.1h.rep.5
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.x
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.x
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.x
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6.x
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.x
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.4
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2.x
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1.x
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.3.x
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4.x
• MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.1
• MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3
• H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.1
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.2
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.3
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.4
• CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.5
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.2
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.3
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.4
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5
• MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.6
• MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1
• MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2
• MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.3
• H37Rv.vs..H37Rv.SDS.treated.rep.1
• H37Rv.vs..H37Rv.SDS.treated.rep.3
• H37Rv.vs..H37Rv.SDS.treated.rep.5
• H37Rv.vs..H37Rv.SDS.treated.rep.6
• H37Rv.hypoxia.2hr.rep.1
• H37Rv.hypoxia.2hr.rep.2
• H37Rv.hypoxia.2hr.rep.5
• H37Rv.hypoxia.2hr.rep.6
• H37Rv.0.2..Oxygen..2h..3
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5
• H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.6
• NRP.Day6..1
• NRP.Day10..1
• NRP.Day10..3
• NRP.Day12..1
• NRP.Day12..2
• NRP.Day14..2
• NRP.Day14..3
• NRP.Day14..4
• NRP.Day14..5
• NRP.Day14..6
• NRP.Day14..7
• NRP.Day14..9
• NRP.Day20..1
• NRP.Day20..2
• NRP.Day30..1
• X0.02mM.GSNOvsDMSO..6h
• X0.1mM.GSNO.DMSO..3.5h
• X0.1mM.GSNOvsDMSO..4h
• X0.1mM.GSNO.DMSO..6h
• X0.1mM.GSNOvsDMSO..6h.
• X0.1mM.GSNOvsDMSO..6h.A
• X4mM.H2O2vsctrl..1h.
• X4mM.H2O2vsctrl..2h.
• X4mM.H2O2vsctrl..2h.A
• X4mM.H2O2.ctrl..2h...2
• X4mM.H2O2.ctrl..4h...1
• X4mM.H2O2.ctrl..4h...2
• H2O2.4mM.vs.ctrl.12h.1
• X20mJ.UVvsctrl..6h.
• UV.20J.vs.ctrl.8h.1
• X25J.UV.ctrl..2h.
• X25J.UVvs.ctrl..6h.
• UV.40J.vs.8h.2
• UV.40J.vs.ctrl.8h.1
• UV.40J.vs.ctrl.12h.1
• X60J.UV.ctrl..2h.
• X60J.UVvsctrl..6h.
• UV.60J.vs.ctrl.6h.1
• H37Rv.hypoxia.4hr.rep.1
• H37Rv.hypoxia.4hr.rep.2
• H37Rv.hypoxia.4hr.rep.3
• H37Rv.hypoxia.4hr.rep.4
• H37Rv.hypoxia.4hr.rep.6
• H37Rv.hypoxia.1.day.rep.6
• H37Rv.hypoxia.1.day.rep.9
• H37Rv.hypoxia.4.day.rep.1
• H37Rv.hypoxia.4.day.rep.3
• H37Rv.hypoxia.4.day.rep.7
• H37Rv.hypoxia.7.day.rep.1
• H37Rv.hypoxia.7.day.rep.2
• H37Rv.hypoxia.7.day.rep.3
• H37Rv.diamide.1h.rep.3
• H37Rv.diamide.1h.rep.4
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.1
• H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3
• H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
• CHP_25uM_2h_01
• MTB1254_SDS_90MIN_03
• Starvation_1254_24h_05
• Starvation_1254_3d_02
• Starvation_1254_6h_04
• Starvation_1254_OA50_12h_02
• Starvation_1254_OA50_24h_02
• Starvation_1254_OA50_24h_03
• Starvation_1254_OA50_24h_04
• Starvation_1254_OA50_3d_01
• Starvation_1254_PA50_24h_04
• Starvation_OA50_24h_03
• Starvation_OA50_6h_01
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
• CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
• BCG.24hr.phagosomal.profile
• MTB.in.Wild.type.macrophages.for.4hrs
• MTB.in.Wild.type.macrophages.for.24hrs
• MTB.in.Wild.type.macrophages.for.48hrs
• MTB.in.Wild.type.macrophages...IFNg.for.4hrs
• MTB.in.Wild.type.macrophages...IFNg.for.24hrs
• MTB.in.Wild.type.macrophages...IFNg.for.48hrs
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7.y
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.y
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.4
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2.y
• MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2.y
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.3.y
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4.y
• MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1.y
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.6
• MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.3
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.1
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.2
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.3
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.4
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.5
• MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.6
• MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.2
• MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.5
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.1
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.2
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.3
• MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.6
• Russell_Lab_Spotted_Oligos_1.3..14.day.resting.macrophage.infection.Day.2..rep.1..Russell_Lab_Spotted_Oligos_1.3..
• Russell_Lab_Spotted_Oligos_1.9..14.day.resting.macrophage.infection.Day.8..rep.1..Russell_Lab_Spotted_Oligos_1.9..
• Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
• Russell_Lab_Spotted_Oligos_1.15.14.day.resting.macrophage.infection.Day.14..rep.1..Russell_Lab_Spotted_Oligos_1.15.
• Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
• SG2.A0_N02A01c3
• SG2.D0_N02A01c5
• SG.ISB.3.0B_N30A01cy.5
• SG8.C.Day.1_N37A11cy.5
• SG8.D.Day.1_N27A12cy.3
• SG8.B.Day.1_N37A05cy.5
• SG7.DT1_N11A08cy.5
• SG7.CT1_N11A07cy.5
• SG7.BT1_N11A06cy.5
• SG7.AT1_N11A05cy.5
• SG2.D1_N02A02c5
• SG2.B1_N02A10c3
• SG2.A1_N02A02c3
• SG8.B.Day.2_N37A06cy.5
• SG2.A3_N02A04c3
• SG2.A5_N02A05c3
• SG2.B5_N02A09c5
• SG2.D5_N02A05c5
• SG2.B7_N02A10c5
• SG2.A7_N02A06c3
• SG6D.T7_N11A02cy.3
• SG6C.T7_N11A01cy.3
• SG7.T7B_N11A09cy.5
• SG7.T7D_N11A11cy.5
• SG8.B.Day.7_N37A09cy.5
• SG8.A.Day.7_N37A11cy.3
• SG.ISB.3.7A_N30A02cy.5
• SG.ISB.3.7B_N30A03cy.3
• SG.ISB.3.7C_N30A03cy.5
• SG12.A6_N32A05cy.3
• SG12.B6_N32A01cy.5
• SG12.B8_N32A02cy.5
• SG12.B24_N32A03cy.5
• SG12.A24_N32A07cy.3
• SG2.B8_N02A11c5
• SG2.D8_N02A07c5
• SG6.B8_N5A07cy.5
• SG6.A8_N5A06cy.5
• SG7.T8C_N11A07cy.3
• SG7.T8B_N11A06cy.3
• SG7.T8D_N11A08cy.3
• SG2.A9_N02A08c3
• SG2.B9_N02A12c5
• SG2.D9_N02A08c5
• SG6.D11_N8A09cy.5
• SG6.A14_N8A10cy.5
• WT_140mM_NaCl_Rep1
• WT_140mM_NaCl_Rep4
• A00470_Q1_t30_diamide
• A00470_Q2_t60_diamide
• A00437_Q1_t30_diamide
• A00437_Q2_t60_diamide
• A00436_Q1_t30_diamide
• A00436_Q3_t90_diamide
• H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep2
• H37Rv.Ctrl.vs.5.ug.ml.garlic.extract.6hrs
• H37Rv.Ctrl.vs.10.ug.ml.garlic.extract.6hrs