| ( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_genes/552f1865b744335b89d4bd61): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 15 | ||||
|---|---|---|---|---|
| Call Stack | ||||
| # | Time | Memory | Function | Location |
| 1 | 0.0000 | 398656 | {main}( ) | .../index.php:0 |
| 2 | 0.0001 | 398936 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
| 3 | 0.1825 | 7193568 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
| 4 | 0.1874 | 7197312 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
| 5 | 0.3030 | 7718072 | get_template_part( ) | .../page.php:28 |
| 6 | 0.3031 | 7718648 | locate_template( ) | .../general-template.php:206 |
| 7 | 0.3031 | 7718776 | load_template( ) | .../template.php:720 |
| 8 | 0.3032 | 7719088 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
| 9 | 0.3045 | 7736264 | the_content( ) | .../content-page.php:22 |
| 10 | 0.3048 | 7736512 | apply_filters( ) | .../post-template.php:256 |
| 11 | 0.3048 | 7736912 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
| 12 | 0.3064 | 7742440 | do_shortcode( ) | .../class-wp-hook.php:310 |
| 13 | 0.3066 | 7748496 | preg_replace_callback ( ) | .../shortcodes.php:273 |
| 14 | 1.7230 | 7757416 | do_shortcode_tag( ) | .../shortcodes.php:273 |
| 15 | 1.7231 | 7757888 | bicluster_genes_shortcode( ) | .../shortcodes.php:433 |
| 16 | 1.7232 | 7758392 | file_get_contents ( ) | .../short_codes.php:15 |
| ( ! ) Notice: Trying to get property 'genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 16 | ||||
|---|---|---|---|---|
| Call Stack | ||||
| # | Time | Memory | Function | Location |
| 1 | 0.0000 | 398656 | {main}( ) | .../index.php:0 |
| 2 | 0.0001 | 398936 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
| 3 | 0.1825 | 7193568 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
| 4 | 0.1874 | 7197312 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
| 5 | 0.3030 | 7718072 | get_template_part( ) | .../page.php:28 |
| 6 | 0.3031 | 7718648 | locate_template( ) | .../general-template.php:206 |
| 7 | 0.3031 | 7718776 | load_template( ) | .../template.php:720 |
| 8 | 0.3032 | 7719088 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
| 9 | 0.3045 | 7736264 | the_content( ) | .../content-page.php:22 |
| 10 | 0.3048 | 7736512 | apply_filters( ) | .../post-template.php:256 |
| 11 | 0.3048 | 7736912 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
| 12 | 0.3064 | 7742440 | do_shortcode( ) | .../class-wp-hook.php:310 |
| 13 | 0.3066 | 7748496 | preg_replace_callback ( ) | .../shortcodes.php:273 |
| 14 | 1.7230 | 7757416 | do_shortcode_tag( ) | .../shortcodes.php:273 |
| 15 | 1.7231 | 7757888 | bicluster_genes_shortcode( ) | .../shortcodes.php:433 |
| ( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 18 | ||||
|---|---|---|---|---|
| Call Stack | ||||
| # | Time | Memory | Function | Location |
| 1 | 0.0000 | 398656 | {main}( ) | .../index.php:0 |
| 2 | 0.0001 | 398936 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
| 3 | 0.1825 | 7193568 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
| 4 | 0.1874 | 7197312 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
| 5 | 0.3030 | 7718072 | get_template_part( ) | .../page.php:28 |
| 6 | 0.3031 | 7718648 | locate_template( ) | .../general-template.php:206 |
| 7 | 0.3031 | 7718776 | load_template( ) | .../template.php:720 |
| 8 | 0.3032 | 7719088 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
| 9 | 0.3045 | 7736264 | the_content( ) | .../content-page.php:22 |
| 10 | 0.3048 | 7736512 | apply_filters( ) | .../post-template.php:256 |
| 11 | 0.3048 | 7736912 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
| 12 | 0.3064 | 7742440 | do_shortcode( ) | .../class-wp-hook.php:310 |
| 13 | 0.3066 | 7748496 | preg_replace_callback ( ) | .../shortcodes.php:273 |
| 14 | 1.7230 | 7757416 | do_shortcode_tag( ) | .../shortcodes.php:273 |
| 15 | 1.7231 | 7757888 | bicluster_genes_shortcode( ) | .../shortcodes.php:433 |
| ( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 29 | ||||
|---|---|---|---|---|
| Call Stack | ||||
| # | Time | Memory | Function | Location |
| 1 | 0.0000 | 398656 | {main}( ) | .../index.php:0 |
| 2 | 0.0001 | 398936 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
| 3 | 0.1825 | 7193568 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
| 4 | 0.1874 | 7197312 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
| 5 | 0.3030 | 7718072 | get_template_part( ) | .../page.php:28 |
| 6 | 0.3031 | 7718648 | locate_template( ) | .../general-template.php:206 |
| 7 | 0.3031 | 7718776 | load_template( ) | .../template.php:720 |
| 8 | 0.3032 | 7719088 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
| 9 | 0.3045 | 7736264 | the_content( ) | .../content-page.php:22 |
| 10 | 0.3048 | 7736512 | apply_filters( ) | .../post-template.php:256 |
| 11 | 0.3048 | 7736912 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
| 12 | 0.3064 | 7742440 | do_shortcode( ) | .../class-wp-hook.php:310 |
| 13 | 0.3066 | 7748496 | preg_replace_callback ( ) | .../shortcodes.php:273 |
| 14 | 1.7230 | 7757416 | do_shortcode_tag( ) | .../shortcodes.php:273 |
| 15 | 1.7231 | 7757888 | bicluster_genes_shortcode( ) | .../shortcodes.php:433 |
ID: 552f1865b744335b89d4bd61
# Conditions: 125
# Genes: 22
Residual: 0.46488237443953
# Conditions: 125
# Genes: 22
Residual: 0.46488237443953
Bicluster Motifs
Bicluster Genes
Bicluster Conditions
- MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.1
- MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.3
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5
- MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.6
- High.iron.wt.vs.low.iron.wt.2b
- H37Rv.0.2..Oxygen..2h..3
- H37Rv.0.2..Oxygen..2h..6
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5
- H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.6
- X0.1ug.mL.Mtmvsctrl..0.33h..x
- X0.1ug.mL.Mtmvsctrl..0.75h..x
- X0.1ug.mL.Mtmvsctrl..1.5h..x
- X0.2ug.mL.Mtmvsctrl..0.33h..x
- X0.2ug.mL.Mtmvsctrl..0.75h..x
- X0.2ug.mL.Mtmvsctrl..1.5h..x
- X0.2ug.mL.Mtmvsctrl..2h..x
- X0.2ug.mL.Mtmvsctrl..2h.A.x
- X0.2ug.mL.Mtmvsctrl..2h.B.x
- X0.2ug.mL.Mtmvsctrl..2h.C.x
- X0.2ug.mL.Mtmvsctrl..4h..x
- X0.2ug.mL.Mtmvsctrl..4h.A.x
- X0.2ug.mL.Mtmvsctrl..4h.B.x
- X0.2ug.mL.Mtm.ctrl..4h...1.x
- X0.2ug.mL.Mtm.ctrl..4h...2.x
- X0.2ug.mL.Mtmvsctrl..6h..x
- Starvation_1254_OA50_12h_02
- Starvation_1254_OA50_12h_03
- Starvation_1254_OA50_12h_04
- Starvation_1254_OA50_24h_02
- Starvation_1254_OA50_24h_03
- Starvation_1254_OA50_24h_04
- Starvation_1254_OA50_3d_01
- Starvation_1254_OA50_3d_02
- Starvation_1254_OA50_3d_03
- Starvation_1254_OA50_3d_04
- Starvation_1254_OA50_5d_01
- Starvation_1254_OA50_5d_02
- Starvation_1254_OA50_5d_03
- Starvation_1254_OA50_5d_04
- Starvation_1254_OA50_6h_02
- Starvation_1254_PA50_24h_01
- Starvation_1254_PA50_24h_02
- Starvation_1254_PA50_24h_03
- Starvation_1254_PA50_24h_04
- Starvation_1254_PA50_6h_01
- Starvation_1254_PA50_6h_02
- Starvation_1254_PA50_6h_03
- Starvation_1254_PA50_6h_04
- Starvation_OA50_24h_01
- Starvation_OA50_24h_03
- Starvation_OA50_6h_01
- Starvation_OA50_6h_02
- Starvation_OA50_6h_03
- Starvation_OA50_6h_04
- X10ug.mL..59vsDMSO..6hA
- X1ug.mL..109vsDMSO..6hA
- X10ug.mL..109.DMSO..6h
- X10ug.mL..109vsDMSO..6h
- X.109..1ug.mL..vs.DMSO..12h..replicate.2..GEO.acc.GSM28052.
- X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054.
- X1ug.mL..241vsDMSO..6hA
- X10ug.mL..241vsDMSO..6h
- X.241..1ug.mL..DMSO..12h..1
- X.241..10ug.mL..DMSO..12h..1
- X.241..10ug.mL..DMSO..12h..2
- DIPED.10ug.mL.vs.DMSO.12h.2
- X0.1ug.mL.Mtmvsctrl..0.33h..y
- X0.2ug.mL.Mtmvsctrl..2h..y
- X0.2ug.mL.Mtmvsctrl..2h.A.y
- X0.2ug.mL.Mtmvsctrl..2h.C.y
- X0.2ug.mL.Mtmvsctrl..4h.A.y
- X0.2ug.mL.Mtm.ctrl..4h...1.y
- X0.2ug.mL.Mtm.ctrl..4h...2.y
- X0.2ug.mL.Mtmvsctrl..6h..y
- X10ug.mL.TriclosanvsDMSO..6hB
- X50ug.mL.Triclosan.EtOH
- X50ug.mL.TriclosanvsEtOH..6h
- X50ug.mL.TriclosanvsEtOH..6hA
- X100ug.mL.TriclosanvsEtOH..6h
- X10ug.mL.EMBvsDMSO..6h
- X20ug.mL.ethambutol.DMSO
- X0.2mg.mL.AmpvsEtOH..6hA
- X0.32ug.mL.CervsEtOH..6h
- X0.5ug.mL.CeruleninvsDMSO..6hA
- X0.5ug.mL.CeruleninvsDMSO..6hB
- X20ug.mL.Cephalexin.Ctrl..6h..1
- X20ug.mL.Cephalexin.Ctrl..6h..2
- X100ug.mL.Cephalexin.Ctrl..6h
- X12ug.mLEthionamidevsEtOH.6h
- X40ug.mL.EtavsEtOH..6h
- X0.4ug.mL.INHvsEtOH..6h
- X0.4ug.mL.INHvsEtOH..6hA
- X10ug.mL.LevovsEtOH..6hA
- X10ug.mL.Nvb.DMSO..6h..1
- X5ug.mL.OfloxvsEtOH..6hA
- X10ug.mL.OfloxvsDMSO..6h
- X10ug.mL.OfloxvsDMSO..6hA
- X130ug.mL.TLMvsDMSO..6h
- X130ug.mL.TLMvsDMSO..6hA
- X0.13mg.mL.TLMvsDMSO..6hA
- X0.2mg.mL.TLMvsEtOH..6hA
- X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.1
- X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.2
- X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1
- X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2
- X130ug.ml.TLM.vs.DMSO.6hrs.rep.1
- X130ug.ml.TLM.vs.DMSO.6hrs.rep.2
- X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.1
- X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2
- MTB1254.3524.1._INH_20MIN
- MTB1254.3524.2._INH_20MIN
- MTB1254_INH_20MIN
- H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
- H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
- H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.2
- H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.1
- H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.1
- H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.2