( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_info/552f1cd1b744335b89d4de8a): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 666 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398656 | {main}( ) | .../index.php:0 |
2 | 0.0001 | 398936 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1663 | 7193904 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1695 | 7197648 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.2533 | 7734792 | get_template_part( ) | .../page.php:28 |
6 | 0.2534 | 7735368 | locate_template( ) | .../general-template.php:206 |
7 | 0.2534 | 7735496 | load_template( ) | .../template.php:720 |
8 | 0.2534 | 7735808 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.2542 | 7736600 | the_content( ) | .../content-page.php:22 |
10 | 0.2544 | 7736848 | apply_filters( ) | .../post-template.php:256 |
11 | 0.2544 | 7737248 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.2554 | 7742776 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.2555 | 7748832 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.2555 | 7749456 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.2555 | 7749456 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
16 | 0.2556 | 7749656 | file_get_contents ( ) | .../short_codes.php:666 |
( ! ) Notice: Trying to get property 'bicluster' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 667 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398656 | {main}( ) | .../index.php:0 |
2 | 0.0001 | 398936 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1663 | 7193904 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1695 | 7197648 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.2533 | 7734792 | get_template_part( ) | .../page.php:28 |
6 | 0.2534 | 7735368 | locate_template( ) | .../general-template.php:206 |
7 | 0.2534 | 7735496 | load_template( ) | .../template.php:720 |
8 | 0.2534 | 7735808 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.2542 | 7736600 | the_content( ) | .../content-page.php:22 |
10 | 0.2544 | 7736848 | apply_filters( ) | .../post-template.php:256 |
11 | 0.2544 | 7737248 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.2554 | 7742776 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.2555 | 7748832 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.2555 | 7749456 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.2555 | 7749456 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
( ! ) Notice: Trying to get property 'id' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 669 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398656 | {main}( ) | .../index.php:0 |
2 | 0.0001 | 398936 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1663 | 7193904 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1695 | 7197648 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.2533 | 7734792 | get_template_part( ) | .../page.php:28 |
6 | 0.2534 | 7735368 | locate_template( ) | .../general-template.php:206 |
7 | 0.2534 | 7735496 | load_template( ) | .../template.php:720 |
8 | 0.2534 | 7735808 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.2542 | 7736600 | the_content( ) | .../content-page.php:22 |
10 | 0.2544 | 7736848 | apply_filters( ) | .../post-template.php:256 |
11 | 0.2544 | 7737248 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.2554 | 7742776 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.2555 | 7748832 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.2555 | 7749456 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.2555 | 7749456 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
( ! ) Notice: Trying to get property 'num_conditions' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 670 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398656 | {main}( ) | .../index.php:0 |
2 | 0.0001 | 398936 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1663 | 7193904 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1695 | 7197648 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.2533 | 7734792 | get_template_part( ) | .../page.php:28 |
6 | 0.2534 | 7735368 | locate_template( ) | .../general-template.php:206 |
7 | 0.2534 | 7735496 | load_template( ) | .../template.php:720 |
8 | 0.2534 | 7735808 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.2542 | 7736600 | the_content( ) | .../content-page.php:22 |
10 | 0.2544 | 7736848 | apply_filters( ) | .../post-template.php:256 |
11 | 0.2544 | 7737248 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.2554 | 7742776 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.2555 | 7748832 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.2555 | 7749456 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.2555 | 7749456 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
( ! ) Notice: Trying to get property 'num_genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 671 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398656 | {main}( ) | .../index.php:0 |
2 | 0.0001 | 398936 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1663 | 7193904 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1695 | 7197648 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.2533 | 7734792 | get_template_part( ) | .../page.php:28 |
6 | 0.2534 | 7735368 | locate_template( ) | .../general-template.php:206 |
7 | 0.2534 | 7735496 | load_template( ) | .../template.php:720 |
8 | 0.2534 | 7735808 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.2542 | 7736600 | the_content( ) | .../content-page.php:22 |
10 | 0.2544 | 7736848 | apply_filters( ) | .../post-template.php:256 |
11 | 0.2544 | 7737248 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.2554 | 7742776 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.2555 | 7748832 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.2555 | 7749456 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.2555 | 7749456 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
( ! ) Notice: Trying to get property 'residual' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 672 | ||||
---|---|---|---|---|
Call Stack | ||||
# | Time | Memory | Function | Location |
1 | 0.0000 | 398656 | {main}( ) | .../index.php:0 |
2 | 0.0001 | 398936 | require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ) | .../index.php:17 |
3 | 0.1663 | 7193904 | require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ) | .../wp-blog-header.php:19 |
4 | 0.1695 | 7197648 | include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ) | .../template-loader.php:106 |
5 | 0.2533 | 7734792 | get_template_part( ) | .../page.php:28 |
6 | 0.2534 | 7735368 | locate_template( ) | .../general-template.php:206 |
7 | 0.2534 | 7735496 | load_template( ) | .../template.php:720 |
8 | 0.2534 | 7735808 | require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ) | .../template.php:787 |
9 | 0.2542 | 7736600 | the_content( ) | .../content-page.php:22 |
10 | 0.2544 | 7736848 | apply_filters( ) | .../post-template.php:256 |
11 | 0.2544 | 7737248 | WP_Hook->apply_filters( ) | .../plugin.php:205 |
12 | 0.2554 | 7742776 | do_shortcode( ) | .../class-wp-hook.php:310 |
13 | 0.2555 | 7748832 | preg_replace_callback ( ) | .../shortcodes.php:273 |
14 | 0.2555 | 7749456 | do_shortcode_tag( ) | .../shortcodes.php:273 |
15 | 0.2555 | 7749456 | bicluster_info_shortcode( ) | .../shortcodes.php:433 |
ID:
# Conditions:
# Genes:
Residual:
# Conditions:
# Genes:
Residual:
Bicluster Motifs
Bicluster Genes
- Rv0247c
- Rv0248c
- Rv0554
- Rv0565c
- Rv0688
- Rv1078
- Rv1932
- Rv2140c
- Rv2141c
- Rv2220
- Rv2271
- Rv2301
- Rv2561
- Rv3224
Bicluster Conditions
- H37Rv.0.05..SDS.exposure.for.1h.rep.3
- H37Rv.0.05..SDS.exposure.for.1h.rep.4
- H37Rv.0.05..SDS.exposure.for.1h.rep.6
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.x
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6.x
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.1
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.3
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.4
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.x
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.x
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.2
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.4
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.4
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.2
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.3
- MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1.x
- H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1
- H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
- H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3
- CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.3
- H37Rv.vs..H37Rv.SDS.treated.rep.2
- H37Rv.vs..H37Rv.SDS.treated.rep.3
- H37Rv.vs..H37Rv.SDS.treated.rep.4
- pH4.8vspH6.8..2h.A
- pH4.8vspH6.8..2h.B
- pH4.8vspH6.8..4h.B
- pH4.8vspH6.8..5h.
- pH4.8vspH6.8..6h.
- pH4.8vspH6.8..7h.
- pH5.2vspH6.8..2h.
- pH5.2vspH6.8..5h.
- pH5.2vspH6.8..5.5h.
- pH5.2vspH6.8..11h.
- pH5.2vspH6.8..16h.
- pH5.6vspH6.8..2h.
- pH5.6vspH6.8..2h.A
- pH5.6vspH6.8..4h.
- pH5.6vspH6.8..4h.B
- pH5.6vspH6.8..5h.
- pH5.6vspH6.8..7h.
- pH5.6vspH6.8..11h.
- pH5.6vspH6.8..16h.
- X0.1mM.GSNO.DMSO..3.5h
- X0.1mM.GSNOvsDMSO..4h
- X0.1mM.GSNO.DMSO..6h
- X4mM.H2O2vsctrl..1h.
- X4mM.H2O2vsctrl..2h.
- X4mM.H2O2vsctrl..2h.A
- X4mM.H2O2.ctrl..2h...1
- X4mM.H2O2.ctrl..2h...2
- X4mM.H2O2.ctrl..4h...1
- X4mM.H2O2.ctrl..4h...2
- X20mJ.UVvsctrl..6h.
- UV.20J.vs.ctrl.8h.1
- UV.40J.vs.8h.2
- X40mJ.UV.ctrl..6h.
- UV.40J.vs.ctrl.8h.1
- UV.60J.vs.ctrl.6h.1
- H37Rv.diamide.1h.rep.3
- H37Rv.diamide.1h.rep.5
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.2
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.3
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.6
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5
- H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6
- Whole.Lung.Surfactant.2hrs.rep.1
- Whole.Lung.Surfactant.2hrs.rep.2
- Whole.Lung.Surfactant.30min.rep.1
- Whole.Lung.Surfactant.30min.rep.2
- Whole.Lung.Surfactant.30min.rep.3
- Whole.Lung.Surfactant.30min.rep.4
- Whole.Lung.Surfactant.30min.rep.5
- Extracted.Lung.Surfactant.30min.rep.1
- Extracted.Lung.Surfactant.30min.rep.3
- Extracted.Lung.Surfactant.30min.rep.4
- Purified.Surfactant.Lipids.2hrs.rep.2
- Purified.Surfactant.Lipids.30min.rep.1
- Purified.Surfactant.Lipids.30min.rep.2
- Purified.Human.SP.A.Coated.2hrs.rep1
- Purified.Human.SP.A.Coated.2hrs.rep2
- Purified.Human.SP.A.Uncoated.2hrs.rep1
- Purified.Human.SP.A.Uncoated.2hrs.rep2
- Purified.Human.SP.A.Uncoated.2hrs.rep4
- CHP_25uM_24h_01
- MTB1254_SDS_90MIN_01
- MTB1254_SDS_90MIN_03
- MTB1254_SDS_90MIN_04
- Mtb.response.to.pH.5.5..6.replicates.
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.1
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.5
- MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.6
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.y
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.5
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.6
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.7
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.3
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.3
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.5
- MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.6
- MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4.y
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.1
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.3
- MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.6
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
- MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.2
- MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.3
- MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.4
- MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.6
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.1
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.2
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.3
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.5
- MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.6
- A00470_Q1_t30_diamide
- A00470_Q2_t60_diamide
- A00470_Q3_t90_diamide
- A00437_Q1_t30_diamide
- A00437_Q2_t60_diamide
- A00437_Q3_t90_diamide
- A00436_Q1_t30_diamide
- A00436_Q3_t90_diamide