Bicluster


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Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.17557195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.17867198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25487719608get_template_part( ).../page.php:28
60.25497720184locate_template( ).../general-template.php:206
70.25497720312load_template( ).../template.php:720
80.25507720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25647737800the_content( ).../content-page.php:22
100.25677738048apply_filters( ).../post-template.php:256
110.25677738448WP_Hook->apply_filters( ).../plugin.php:205
120.25817743976do_shortcode( ).../class-wp-hook.php:310
130.25827750032preg_replace_callback ( ).../shortcodes.php:273
140.25827750656do_shortcode_tag( ).../shortcodes.php:273
150.25837750656bicluster_info_shortcode( ).../shortcodes.php:433
160.25837750856file_get_contents ( ).../short_codes.php:666
( ! ) Notice: Trying to get property 'bicluster' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 667
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.17557195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.17867198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25487719608get_template_part( ).../page.php:28
60.25497720184locate_template( ).../general-template.php:206
70.25497720312load_template( ).../template.php:720
80.25507720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25647737800the_content( ).../content-page.php:22
100.25677738048apply_filters( ).../post-template.php:256
110.25677738448WP_Hook->apply_filters( ).../plugin.php:205
120.25817743976do_shortcode( ).../class-wp-hook.php:310
130.25827750032preg_replace_callback ( ).../shortcodes.php:273
140.25827750656do_shortcode_tag( ).../shortcodes.php:273
150.25837750656bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Notice: Trying to get property 'id' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 669
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.17557195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.17867198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25487719608get_template_part( ).../page.php:28
60.25497720184locate_template( ).../general-template.php:206
70.25497720312load_template( ).../template.php:720
80.25507720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25647737800the_content( ).../content-page.php:22
100.25677738048apply_filters( ).../post-template.php:256
110.25677738448WP_Hook->apply_filters( ).../plugin.php:205
120.25817743976do_shortcode( ).../class-wp-hook.php:310
130.25827750032preg_replace_callback ( ).../shortcodes.php:273
140.25827750656do_shortcode_tag( ).../shortcodes.php:273
150.25837750656bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Notice: Trying to get property 'num_conditions' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 670
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.17557195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.17867198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25487719608get_template_part( ).../page.php:28
60.25497720184locate_template( ).../general-template.php:206
70.25497720312load_template( ).../template.php:720
80.25507720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25647737800the_content( ).../content-page.php:22
100.25677738048apply_filters( ).../post-template.php:256
110.25677738448WP_Hook->apply_filters( ).../plugin.php:205
120.25817743976do_shortcode( ).../class-wp-hook.php:310
130.25827750032preg_replace_callback ( ).../shortcodes.php:273
140.25827750656do_shortcode_tag( ).../shortcodes.php:273
150.25837750656bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Notice: Trying to get property 'num_genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 671
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.17557195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.17867198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25487719608get_template_part( ).../page.php:28
60.25497720184locate_template( ).../general-template.php:206
70.25497720312load_template( ).../template.php:720
80.25507720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25647737800the_content( ).../content-page.php:22
100.25677738048apply_filters( ).../post-template.php:256
110.25677738448WP_Hook->apply_filters( ).../plugin.php:205
120.25817743976do_shortcode( ).../class-wp-hook.php:310
130.25827750032preg_replace_callback ( ).../shortcodes.php:273
140.25827750656do_shortcode_tag( ).../shortcodes.php:273
150.25837750656bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Notice: Trying to get property 'residual' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 672
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.17557195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.17867198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25487719608get_template_part( ).../page.php:28
60.25497720184locate_template( ).../general-template.php:206
70.25497720312load_template( ).../template.php:720
80.25507720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25647737800the_content( ).../content-page.php:22
100.25677738048apply_filters( ).../post-template.php:256
110.25677738448WP_Hook->apply_filters( ).../plugin.php:205
120.25817743976do_shortcode( ).../class-wp-hook.php:310
130.25827750032preg_replace_callback ( ).../shortcodes.php:273
140.25827750656do_shortcode_tag( ).../shortcodes.php:273
150.25837750656bicluster_info_shortcode( ).../shortcodes.php:433
ID:
# Conditions:
# Genes:
Residual:

Bicluster Motifs

Bicluster Genes

  • Rv0090
  • Rv0259c
  • Rv0275c
  • Rv0279c
  • Rv0324
  • Rv0331
  • Rv0577
  • Rv0603
  • Rv0726c
  • Rv1019
  • Rv1087
  • Rv1373
  • Rv2008c
  • Rv2169c
  • Rv2320c
  • Rv3545c

Bicluster Conditions

  • X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.x
  • X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.x
  • X20ug.ml.KCN.vs.DMSO.6hrs.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.1
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.2
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.3
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.3
  • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.1
  • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.4
  • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.1
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.1
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.2
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3
  • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.1
  • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.2
  • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.4
  • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.3
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.3
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.4
  • MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.1
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.1
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.3
  • MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.2
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.1
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.3
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.2
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.4
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.1
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.2
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.4
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.2
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.3
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.1
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.2
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.3
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.2
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.2
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.2
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.1
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.2
  • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.1
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.3
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.4
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.1
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.3
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.4
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.5
  • X0.1mMGSNO.20ug.mLCPZvsDMSO.6h
  • X10ug.mL.EconazolevsEtOH..6h
  • X10ug.mL.EconazolevsEtOH..6hA
  • X24ug.mL.Econazole.DMSO..6h..1
  • X24ug.mL.Econazole.DMSO..6h..2
  • X10ug.mL.Amikacin.EtOH..6h
  • X13ug.mL.clfzine.DMSO..6h..1
  • X13ug.mL.clfzine.DMSO..6h..2
  • X10ug.mLchlorpromazinevsctrl.6h
  • X10ug.mL.ChlorprovsEtOH
  • X10ug.mL.ChlorprovsEtOH..6h
  • X25ug.mL.CPZvsDMSO..6h.B
  • X60ug.mL.ChlorprovsEtOH..6h
  • X10ug.mL.ClotrimvsEtOH..6hA
  • X10ug.mL.clotrimvsEtOH..6h
  • X24ug.mL.cltrmazole.DMS..6h..1
  • X24ug.mL.cltrmazole.DMS..6h..2
  • X24ug.mL.cltrmazole.DMS..6h..3
  • X5ug.mL.CapvsEtOH..6h
  • X10ug.mL.CapvsEtOH..6h
  • X10uM.CCCP.DMSO..6h
  • X50uM.CCCPvsDMSO..6h
  • X0.5mM.DNP.DMSO..6h
  • X20uM.DCCD.DMSO..6h..1
  • X20uM.DCCD.DMSO..6h..2
  • X100uM.DCCD.DMSO..6h
  • X2mM.DTTvsDMSO..6h.A
  • X6ug.mL.MenadionevsDMSO..6h
  • X50uM.NigericinvsDMSO..6h.A
  • X10ug.mL.RoxvsEtOH..6h
  • X10ug.mL.RoxvsEtOH..6hA
  • X30ug.mL.RoxvsEtOH..6h
  • X30ug.mL.RoxvsEtOH..6hA
  • X50ug.mL.RoxvsEtOH..6hA
  • X2ug.mL.SMvsEtOH..6hA
  • X25ug.mL.TRZ.DMSO..6h
  • X50ug.mL.Thioridazine.DMSO..6h
  • X10ug.mL.TetvsEtOH..6h
  • X10ug.mL.TetvsEtOH..6hA
  • X1uM.ValinomycinvsDMSO..6h
  • X1uM.ValinomycinvsDMSO..6h.A
  • X1uM.ValinomycinvsDMSO..6h.B
  • X10uM.ValinomycinvsDMSO..6h
  • X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.y
  • X20ug.ml.KCN.vs.DMSO.6hrs.y
  • Tet_500ng_30M_01
  • X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A
  • X10ug.ml.capreomycin.vs.Ethanol..6hrs
  • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1
  • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.1
  • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.1
  • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.2
  • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.2
  • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.2
  • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2
  • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.1
  • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.2