Bicluster


( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_genes/552f3ed2b744335b89d5b784): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 15
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18577195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18937198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.26927719608get_template_part( ).../page.php:28
60.26937720184locate_template( ).../general-template.php:206
70.26937720312load_template( ).../template.php:720
80.26937720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27077737800the_content( ).../content-page.php:22
100.27107738048apply_filters( ).../post-template.php:256
110.27107738448WP_Hook->apply_filters( ).../plugin.php:205
120.27287743976do_shortcode( ).../class-wp-hook.php:310
130.27297750032preg_replace_callback ( ).../shortcodes.php:273
141.51397758952do_shortcode_tag( ).../shortcodes.php:273
151.51407759424bicluster_genes_shortcode( ).../shortcodes.php:433
161.51417759928file_get_contents ( ).../short_codes.php:15

( ! ) Notice: Trying to get property 'genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 16
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18577195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18937198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.26927719608get_template_part( ).../page.php:28
60.26937720184locate_template( ).../general-template.php:206
70.26937720312load_template( ).../template.php:720
80.26937720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27077737800the_content( ).../content-page.php:22
100.27107738048apply_filters( ).../post-template.php:256
110.27107738448WP_Hook->apply_filters( ).../plugin.php:205
120.27287743976do_shortcode( ).../class-wp-hook.php:310
130.27297750032preg_replace_callback ( ).../shortcodes.php:273
141.51397758952do_shortcode_tag( ).../shortcodes.php:273
151.51407759424bicluster_genes_shortcode( ).../shortcodes.php:433

( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 18
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18577195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18937198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.26927719608get_template_part( ).../page.php:28
60.26937720184locate_template( ).../general-template.php:206
70.26937720312load_template( ).../template.php:720
80.26937720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27077737800the_content( ).../content-page.php:22
100.27107738048apply_filters( ).../post-template.php:256
110.27107738448WP_Hook->apply_filters( ).../plugin.php:205
120.27287743976do_shortcode( ).../class-wp-hook.php:310
130.27297750032preg_replace_callback ( ).../shortcodes.php:273
141.51397758952do_shortcode_tag( ).../shortcodes.php:273
151.51407759424bicluster_genes_shortcode( ).../shortcodes.php:433

( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 29
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18577195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18937198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.26927719608get_template_part( ).../page.php:28
60.26937720184locate_template( ).../general-template.php:206
70.26937720312load_template( ).../template.php:720
80.26937720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27077737800the_content( ).../content-page.php:22
100.27107738048apply_filters( ).../post-template.php:256
110.27107738448WP_Hook->apply_filters( ).../plugin.php:205
120.27287743976do_shortcode( ).../class-wp-hook.php:310
130.27297750032preg_replace_callback ( ).../shortcodes.php:273
141.51397758952do_shortcode_tag( ).../shortcodes.php:273
151.51407759424bicluster_genes_shortcode( ).../shortcodes.php:433
ID: 552f3ed2b744335b89d5b784
# Conditions: 133
# Genes: 10
Residual: 0.3301248319418

Bicluster Motifs

Bicluster Genes

    Bicluster Conditions

    • MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2
    • H37Rv.hypoxia.2hr.rep.1
    • H37Rv.hypoxia.2hr.rep.2
    • H37Rv.hypoxia.2hr.rep.3
    • H37Rv.hypoxia.2hr.rep.5
    • NRP.Day6..1
    • NRP.Day8..2
    • NRP.Day8..3
    • NRP.Day14..1
    • NRP.Day14..2
    • NRP.Day14..4
    • NRP.Day14..5
    • NRP.Day14..9
    • NRP.Day20..1
    • NRP.Day20..2
    • X4mM.H2O2vsctrl..1h.
    • X4mM.H2O2vsctrl..2h.
    • X4mM.H2O2vsctrl..2h.A
    • UV.40J.vs.ctrl.8h.1
    • H37Rv.hypoxia.4hr.rep.1
    • H37Rv.hypoxia.4hr.rep.2
    • H37Rv.hypoxia.4hr.rep.5
    • H37Rv.hypoxia.4hr.rep.7
    • H37Rv.hypoxia.8hr.rep.1
    • H37Rv.hypoxia.8hr.rep.2
    • H37Rv.hypoxia.8hr.rep.3
    • H37Rv.hypoxia.12hr.rep.1
    • H37Rv.hypoxia.12hr.rep.2
    • H37Rv.hypoxia.1.day.rep.2
    • H37Rv.hypoxia.1.day.rep.3
    • H37Rv.hypoxia.1.day.rep.6
    • H37Rv.hypoxia.1.day.rep.9
    • H37Rv.hypoxia.4.day.rep.2
    • H37Rv.hypoxia.4.day.rep.3
    • H37Rv.hypoxia.4.day.rep.5
    • H37Rv.hypoxia.4.day.rep.6
    • H37Rv.hypoxia.4.day.rep.7
    • H37Rv.hypoxia.7.day.rep.2
    • H37Rv.hypoxia.7.day.rep.3
    • H37Rv.hypoxia.7.day.rep.4
    • H37Rv.hypoxia.7.day.rep.7
    • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.3
    • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
    • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.6
    • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.1
    • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
    • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.1
    • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
    • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.3
    • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.4
    • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.6
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.1
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.2
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.4
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.5
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.6
    • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.2
    • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
    • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.5
    • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.6
    • SG7.AT0_N11A01cy.5
    • SG7.BT0_N11A02cy.5
    • SG7.CT0_N11A03cy.5
    • SG7.DT0_N11A04cy.5
    • SG8.A.Day.0.pre_fix_N37A04cy.5
    • SG8.B.Day.0.pre_N37A12cy.3
    • SG8.C.Day.0.post_N27A08cy.3
    • SG8.C.Day.0.pre_N27A07cy.3
    • SG8.D.Day.0.pre_N27A10cy.3
    • SG8.C.Day.0.post_N37A10cy.5
    • SG8.D.Day.0.post_N27A11cy.3
    • SG6_B1_N7A11cy.5
    • SG6_A1_N7A11cy.3
    • SG6.D1_N5A05cy.5
    • SG2.A1_N02A02c3
    • SG8.A.Day.2_N37A08cy.3
    • SG8.C.Day.2_N37A12cy.5
    • SG8.B.Day.2_N37A06cy.5
    • SG2.A2_N02A03c3
    • SG2.B2_N02A11c3
    • SG2.D2_N02A03c5
    • SG8.A.Day.3_N37A09cy.3
    • SG8.B.Day.3_N37A07cy.5
    • SG2.A3_N02A04c3
    • SG2.B3_N02A12c3
    • SG2.D3_N02A04c5
    • SG8.B.Day.5_N37A08cy.5
    • SG2.A5_N02A05c3
    • SG2.B5_N02A09c5
    • SG2.D7_N02A06c5
    • SG2.B7_N02A10c5
    • SG2.A7_N02A06c3
    • SG6D.T7_N11A02cy.3
    • SG6C.T7_N11A01cy.3
    • SG6_B7_N7A12cy.5
    • SG6_A7_N7A12cy.3
    • SG7.T7B_N11A09cy.5
    • SG7.T7C_N11A10cy.5
    • SG7.T7D_N11A11cy.5
    • SG.ISB.3.7A_N30A02cy.5
    • SG.ISB.3.7C_N30A03cy.5
    • SG12.A0_N32A01cy.3
    • SG12.C1_N32A06cy.5
    • SG12.B4_N32A12cy.3
    • SG12.C4_N32A08cy.5
    • SG12.C6_N32A09cy.5
    • SG12.B8_N32A02cy.5
    • SG12.C8_N32A10cy.5
    • SG12.B24_N32A03cy.5
    • SG12.A24_N32A07cy.3
    • SG2.A8_N02A07c3
    • SG6D.T8_N11A03cy.3
    • SG6.C8_N5A08cy.5
    • SG6.B8_N5A07cy.5
    • SG6.A8_N5A06cy.5
    • SG7.T8C_N11A07cy.3
    • SG7.T8B_N11A06cy.3
    • SG7.T8A_N11A05cy.3
    • SG7.T8D_N11A08cy.3
    • SG.ISB.3.8B_N30A05cy.3
    • SG2.D9_N02A08c5
    • SG6.C11_N5A12cy.5
    • SG6.A11_N5A10cy.5
    • SG7.T12D_N11A12cy.3
    • SG7.T12C_N11A11cy.3
    • SG7.T12B_N11A10cy.3
    • SG7.T12A_N11A09cy.3
    • SG12.C120_N32A12cy.5
    • SG12.B120_N32A04cy.5
    • SG.ISB.3.12A_N30A06cy.5
    • SG.ISB.3.12D_N30A08cy.3
    • SG6D.T14_N11A04cy.3