Bicluster


( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_genes/552f9961b744335b89d7b3de): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 15
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18937193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19397197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27787718072get_template_part( ).../page.php:28
60.27797718648locate_template( ).../general-template.php:206
70.27797718776load_template( ).../template.php:720
80.27807719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27917736264the_content( ).../content-page.php:22
100.27947736512apply_filters( ).../post-template.php:256
110.27947736912WP_Hook->apply_filters( ).../plugin.php:205
120.28097742440do_shortcode( ).../class-wp-hook.php:310
130.28107748496preg_replace_callback ( ).../shortcodes.php:273
143.98127757416do_shortcode_tag( ).../shortcodes.php:273
153.98127757888bicluster_genes_shortcode( ).../shortcodes.php:433
163.98137758392file_get_contents ( ).../short_codes.php:15

( ! ) Notice: Trying to get property 'genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 16
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18937193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19397197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27787718072get_template_part( ).../page.php:28
60.27797718648locate_template( ).../general-template.php:206
70.27797718776load_template( ).../template.php:720
80.27807719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27917736264the_content( ).../content-page.php:22
100.27947736512apply_filters( ).../post-template.php:256
110.27947736912WP_Hook->apply_filters( ).../plugin.php:205
120.28097742440do_shortcode( ).../class-wp-hook.php:310
130.28107748496preg_replace_callback ( ).../shortcodes.php:273
143.98127757416do_shortcode_tag( ).../shortcodes.php:273
153.98127757888bicluster_genes_shortcode( ).../shortcodes.php:433

( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 18
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18937193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19397197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27787718072get_template_part( ).../page.php:28
60.27797718648locate_template( ).../general-template.php:206
70.27797718776load_template( ).../template.php:720
80.27807719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27917736264the_content( ).../content-page.php:22
100.27947736512apply_filters( ).../post-template.php:256
110.27947736912WP_Hook->apply_filters( ).../plugin.php:205
120.28097742440do_shortcode( ).../class-wp-hook.php:310
130.28107748496preg_replace_callback ( ).../shortcodes.php:273
143.98127757416do_shortcode_tag( ).../shortcodes.php:273
153.98127757888bicluster_genes_shortcode( ).../shortcodes.php:433

( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 29
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18937193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19397197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27787718072get_template_part( ).../page.php:28
60.27797718648locate_template( ).../general-template.php:206
70.27797718776load_template( ).../template.php:720
80.27807719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27917736264the_content( ).../content-page.php:22
100.27947736512apply_filters( ).../post-template.php:256
110.27947736912WP_Hook->apply_filters( ).../plugin.php:205
120.28097742440do_shortcode( ).../class-wp-hook.php:310
130.28107748496preg_replace_callback ( ).../shortcodes.php:273
143.98127757416do_shortcode_tag( ).../shortcodes.php:273
153.98127757888bicluster_genes_shortcode( ).../shortcodes.php:433
ID: 552f9961b744335b89d7b3de
# Conditions: 92
# Genes: 22
Residual: 0.48054392416243

Bicluster Motifs

Bicluster Genes

    Bicluster Conditions

    • X0.1ug.mL.Mtmvsctrl..0.33h..x
    • X0.1ug.mL.Mtmvsctrl..0.75h..x
    • X0.2ug.mL.Mtmvsctrl..0.75h..x
    • X0.2ug.mL.Mtmvsctrl..2h.A.x
    • X0.2ug.mL.Mtmvsctrl..2h.B.x
    • X0.2ug.mL.Mtmvsctrl..2h.C.x
    • X0.2ug.mL.Mtmvsctrl..4h..x
    • X0.2ug.mL.Mtmvsctrl..4h.A.x
    • X0.2ug.mL.Mtmvsctrl..4h.B.x
    • X0.2ug.mL.Mtm.ctrl..4h...2.x
    • X0.2ug.mL.Mtmvsctrl..6h..x
    • X4mM.H2O2vsctrl..1h.
    • X4mM.H2O2vsctrl..2h.A
    • X4mM.H2O2.ctrl..2h...2
    • X4mM.H2O2.ctrl..4h...1
    • X4mM.H2O2.ctrl..4h...2
    • X4mM.H2O2vsctrl..4h.
    • H2O2.4mM.vs.ctrl.12h.1
    • X20mJ.UVvsctrl..6h.
    • UV.20J.vs.ctrl.8h.1
    • X25J.UVvs.ctrl..6h.
    • UV.40J.vs.8h.2
    • X40mJ.UV.ctrl..6h.
    • UV.40J.vs.ctrl.8h.1
    • UV.40J.vs.ctrl.12h.1
    • X60J.UVvsctrl..6h.
    • UV.60J.vs.ctrl.6h.1
    • Starvation_1254_24h_02
    • Starvation_1254_24h_03
    • Starvation_1254_24h_06
    • Starvation_1254_24h_07
    • Starvation_1254_24h_08
    • Starvation_1254_6h_02
    • Starvation_1254_6h_03
    • Starvation_1254_6h_04
    • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
    • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.6
    • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.3
    • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.6
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.1
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.2
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.5
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.6
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.3
    • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.3
    • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.2
    • X0.2ug.mL..111891.DMSO..5.5h..1
    • X0.2ug.mL..111891.DMSO..5.5h..3
    • X0.5ug.mL..111891vsDMSO.6h
    • X1.ug.mL..111891vsDMSO..6h
    • X1ug.mL..111891vsDMSO..6h
    • X2ug.mL..111891vsDMSO..6h
    • X1ug.mL..111891.DMSO..12h..1
    • X1ug.mL..111891.DMSO..12h..2
    • X0.5ug.mL..111895vsDMSO..6h
    • X1ug.mL..111895vsDMSO..6h
    • X1ug.mL..111895vsDMSO..6hA
    • X2ug.mL..111895vsDMSO..6h
    • X2ug.mL..111895vsDMSO..6hA
    • X2ug.mL..111895vsDMSO..6hB
    • X0.5ug.mL..121940vsDMSO.6h
    • X0.5ug.mL..121940vsDMSO.6hA
    • X2ug.mL..121940vsDMSO..6h
    • X2ug.mL..121940vsDMSO..6hA
    • X1ug.mL..121940.DMSO..12h
    • X1ug.mL..124196vsDMSO..6h
    • X1ug.mL..124196vsDMSO..6hA
    • X0.1ug.mL.Mtmvsctrl..0.33h..y
    • X0.1ug.mL.Mtmvsctrl..0.75h..y
    • X0.1ug.mL.Mtmvsctrl..1.5h..y
    • X0.2ug.mL.Mtmvsctrl..0.33h..y
    • X0.2ug.mL.Mtmvsctrl..2h..y
    • X0.2ug.mL.Mtmvsctrl..2h.A.y
    • X0.2ug.mL.Mtmvsctrl..2h.B.y
    • X0.2ug.mL.Mtmvsctrl..4h..y
    • X0.2ug.mL.Mtmvsctrl..4h.A.y
    • X0.2ug.mL.Mtmvsctrl..4h.B.y
    • X0.2ug.mL.Mtm.ctrl..4h...1.y
    • X0.2ug.mL.Mtm.ctrl..4h...2.y
    • X0.2ug.mL.Mtmvsctrl..6h..y
    • X100uM.DipyridylvsCtrl..6hA
    • X100uM.Dipyridylvsctrl..6h
    • X200uM.Dipyridylvsctrl..6h
    • X200uM.Dipyridylvsctrl..6hA
    • X150uM.Deferroxaminevsctrl..6hB
    • X10ug.mL.LevovsEtOH..6h
    • X10ug.mL.LevovsEtOH..6hA
    • X10ug.mL.Nvb.DMSO..6h..2
    • X10ug.mL.Nvb.DMSO..6h..3
    • X9ug.mLAscidideminNpvsDMSO.6h
    • X5ug.mL.OfloxvsEtOH..6h
    • X5ug.mL.OfloxvsEtOH..6hA