Bicluster


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Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.16537193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16857197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25257718072get_template_part( ).../page.php:28
60.25257718648locate_template( ).../general-template.php:206
70.25257718776load_template( ).../template.php:720
80.25267719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25367736264the_content( ).../content-page.php:22
100.25387736512apply_filters( ).../post-template.php:256
110.25387736912WP_Hook->apply_filters( ).../plugin.php:205
120.25497742440do_shortcode( ).../class-wp-hook.php:310
130.25507748496preg_replace_callback ( ).../shortcodes.php:273
140.25507749120do_shortcode_tag( ).../shortcodes.php:273
150.25517749120bicluster_info_shortcode( ).../shortcodes.php:433
160.25517749320file_get_contents ( ).../short_codes.php:666

( ! ) Notice: Trying to get property 'bicluster' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 667
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.16537193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16857197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25257718072get_template_part( ).../page.php:28
60.25257718648locate_template( ).../general-template.php:206
70.25257718776load_template( ).../template.php:720
80.25267719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25367736264the_content( ).../content-page.php:22
100.25387736512apply_filters( ).../post-template.php:256
110.25387736912WP_Hook->apply_filters( ).../plugin.php:205
120.25497742440do_shortcode( ).../class-wp-hook.php:310
130.25507748496preg_replace_callback ( ).../shortcodes.php:273
140.25507749120do_shortcode_tag( ).../shortcodes.php:273
150.25517749120bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'id' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 669
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.16537193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16857197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25257718072get_template_part( ).../page.php:28
60.25257718648locate_template( ).../general-template.php:206
70.25257718776load_template( ).../template.php:720
80.25267719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25367736264the_content( ).../content-page.php:22
100.25387736512apply_filters( ).../post-template.php:256
110.25387736912WP_Hook->apply_filters( ).../plugin.php:205
120.25497742440do_shortcode( ).../class-wp-hook.php:310
130.25507748496preg_replace_callback ( ).../shortcodes.php:273
140.25507749120do_shortcode_tag( ).../shortcodes.php:273
150.25517749120bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_conditions' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 670
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.16537193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16857197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25257718072get_template_part( ).../page.php:28
60.25257718648locate_template( ).../general-template.php:206
70.25257718776load_template( ).../template.php:720
80.25267719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25367736264the_content( ).../content-page.php:22
100.25387736512apply_filters( ).../post-template.php:256
110.25387736912WP_Hook->apply_filters( ).../plugin.php:205
120.25497742440do_shortcode( ).../class-wp-hook.php:310
130.25507748496preg_replace_callback ( ).../shortcodes.php:273
140.25507749120do_shortcode_tag( ).../shortcodes.php:273
150.25517749120bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 671
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.16537193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16857197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25257718072get_template_part( ).../page.php:28
60.25257718648locate_template( ).../general-template.php:206
70.25257718776load_template( ).../template.php:720
80.25267719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25367736264the_content( ).../content-page.php:22
100.25387736512apply_filters( ).../post-template.php:256
110.25387736912WP_Hook->apply_filters( ).../plugin.php:205
120.25497742440do_shortcode( ).../class-wp-hook.php:310
130.25507748496preg_replace_callback ( ).../shortcodes.php:273
140.25507749120do_shortcode_tag( ).../shortcodes.php:273
150.25517749120bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'residual' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 672
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.16537193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16857197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25257718072get_template_part( ).../page.php:28
60.25257718648locate_template( ).../general-template.php:206
70.25257718776load_template( ).../template.php:720
80.25267719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25367736264the_content( ).../content-page.php:22
100.25387736512apply_filters( ).../post-template.php:256
110.25387736912WP_Hook->apply_filters( ).../plugin.php:205
120.25497742440do_shortcode( ).../class-wp-hook.php:310
130.25507748496preg_replace_callback ( ).../shortcodes.php:273
140.25507749120do_shortcode_tag( ).../shortcodes.php:273
150.25517749120bicluster_info_shortcode( ).../shortcodes.php:433
ID:
# Conditions:
# Genes:
Residual:

Bicluster Motifs

Bicluster Genes

  • Rv0060
  • Rv0142
  • Rv0331
  • Rv0333
  • Rv0423c
  • Rv0663
  • Rv0686
  • Rv0687
  • Rv0791c
  • Rv0940c
  • Rv1142c
  • Rv1285
  • Rv1468c
  • Rv1638
  • Rv1801
  • Rv1817
  • Rv1908c
  • Rv2215
  • Rv2460c
  • Rv2461c
  • Rv2484c
  • Rv2847c
  • Rv2873
  • Rv3083
  • Rv3084
  • Rv3085
  • Rv3533c

Bicluster Conditions

  • Strain.CDC1551..replicate.1
  • Strain.CDC1551..replicate.2
  • Strain.CDC1551..replicate.3
  • Strain.CDC1551..replicate.4
  • Strain.1006...replicate.1
  • Strain.1254...replicate.4
  • Strain.1254...replicate.2
  • Strain.1254...replicate.1
  • Strain.1843..replicate.1
  • Strain.1843...replicate.2
  • Strain.1843..replicate.4
  • Strain.3160...replicate.3
  • Strain.3160..replicate.4
  • Strain.9700665..replicate.1
  • Strain.9700665..replicate.2
  • Strain.9700665..replicate.3
  • Strain.9700665..replicate.4
  • Strain.9800608..replicate.1
  • Strain.9800608...replicate.3
  • Strain.9802501..replicate1
  • Strain.9802501..replicate.2
  • Strain.9802826..replicate.1
  • Strain.9802826..replicate.4
  • Strain.M3061a..replicate.1
  • Strain.M3061a..replicate.2
  • Strain.M3061a..replicate.3
  • Strain.M3061a..replicate.4
  • H37Rv.Vs.M.bovis.rep3
  • H37Rv.Vs.M.bovis.rep4
  • MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.3
  • MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1
  • MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5
  • MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.6
  • H37Rv.0.2..Oxygen..2h..1
  • H37Rv.0.2..Oxygen..2h..2
  • H37Rv.0.2..Oxygen..2h..3
  • H37Rv.0.2..Oxygen..2h..5
  • H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1
  • H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5
  • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
  • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
  • H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
  • H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
  • Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
  • Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
  • Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
  • Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
  • Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
  • Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
  • Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
  • Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
  • Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
  • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.3
  • aceatate.induction.1
  • aceatate.induction.2
  • Acetate.3mM.2h.01
  • Acetate.3mM.2h.03
  • Acetate.3mM.30m.05
  • Acetate.3mM.60m.02
  • CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3
  • CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1
  • CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.2
  • CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.3
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.1
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.2
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.4
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.2
  • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.4
  • hip.mutant.KL2825..biological.rep1
  • hip.mutant.HTS1105..biological.rep2
  • hip.mutant.HT1116..biological.rep1
  • hip.mutant.HT1117..biological.rep2
  • hip.mutant.HT1120..biological.rep1
  • hip.mutant.HT1120..biological.rep2
  • hip.mutant.HT1130..biological.rep1
  • hip.mutant.HT1130..biological.rep2
  • hip.mutant.HT1134..biological.rep1
  • hip.mutant.HT1134..biological.rep2
  • hip.mutant.HT1170..biological.rep1
  • X20ug.mL.Prcp.6776.DMSO..6h..1
  • X20ug.mL.Procept.6776vsDMSO..6h
  • X5ug.mLProcept.6778vsDMSO.6h
  • X5ug.mLProcept.6778vsDMSO.6hA
  • X20ug.mL.Prcp.6778.DMSO..6h..1
  • X20ug.mLProcept6778vsDMSO.6h
  • X20ug.mLProcept6778vsDMSO.6hB
  • X40ug.mLProcept6778vsDMSO.6hA
  • X10ug.mL.PA.21vsDMSO..6h
  • X50ug.mL.PA.21vsDMSO..6h
  • X0.2ug.mL.PA824.DMSO..6h..1
  • X0.2ug.mL.PA824.DMSO..6h..2
  • X0.4ug.mL.PA824.DMSO..6h..1
  • X0.4ug.mL.PA824.DMSO..6h..2
  • X0.4ug.mL.PA824.DMSO..6h..3
  • X0.4ug.mL.PA824.DMSO..6h..4
  • X2ug.mL.PA824.DMSO..6h..2
  • X20ug.mL.methoxatinvsDMSO..6h
  • X2mMb.mercaptoethanolvsDMSO.6h
  • X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1
  • X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.1
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.x
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.y
  • MTB.at.T30..biological.rep1
  • MTB.at.T30..biological.rep2
  • MTB.at.T30..biological.rep3
  • MTB.at.T60..biological.rep1
  • MTB.at.T60..biological.rep2
  • MTB.at.T360..biological.rep1
  • MTB.at.T360..biological.rep4