Bicluster


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Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18977195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19287198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27897719608get_template_part( ).../page.php:28
60.27897720184locate_template( ).../general-template.php:206
70.27897720312load_template( ).../template.php:720
80.27907720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.28057737800the_content( ).../content-page.php:22
100.28077738048apply_filters( ).../post-template.php:256
110.28077738448WP_Hook->apply_filters( ).../plugin.php:205
120.28257743976do_shortcode( ).../class-wp-hook.php:310
130.28277750032preg_replace_callback ( ).../shortcodes.php:273
140.28277750656do_shortcode_tag( ).../shortcodes.php:273
150.28277750656bicluster_info_shortcode( ).../shortcodes.php:433
160.28287750856file_get_contents ( ).../short_codes.php:666

( ! ) Notice: Trying to get property 'bicluster' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 667
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18977195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19287198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27897719608get_template_part( ).../page.php:28
60.27897720184locate_template( ).../general-template.php:206
70.27897720312load_template( ).../template.php:720
80.27907720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.28057737800the_content( ).../content-page.php:22
100.28077738048apply_filters( ).../post-template.php:256
110.28077738448WP_Hook->apply_filters( ).../plugin.php:205
120.28257743976do_shortcode( ).../class-wp-hook.php:310
130.28277750032preg_replace_callback ( ).../shortcodes.php:273
140.28277750656do_shortcode_tag( ).../shortcodes.php:273
150.28277750656bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'id' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 669
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18977195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19287198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27897719608get_template_part( ).../page.php:28
60.27897720184locate_template( ).../general-template.php:206
70.27897720312load_template( ).../template.php:720
80.27907720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.28057737800the_content( ).../content-page.php:22
100.28077738048apply_filters( ).../post-template.php:256
110.28077738448WP_Hook->apply_filters( ).../plugin.php:205
120.28257743976do_shortcode( ).../class-wp-hook.php:310
130.28277750032preg_replace_callback ( ).../shortcodes.php:273
140.28277750656do_shortcode_tag( ).../shortcodes.php:273
150.28277750656bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_conditions' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 670
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18977195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19287198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27897719608get_template_part( ).../page.php:28
60.27897720184locate_template( ).../general-template.php:206
70.27897720312load_template( ).../template.php:720
80.27907720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.28057737800the_content( ).../content-page.php:22
100.28077738048apply_filters( ).../post-template.php:256
110.28077738448WP_Hook->apply_filters( ).../plugin.php:205
120.28257743976do_shortcode( ).../class-wp-hook.php:310
130.28277750032preg_replace_callback ( ).../shortcodes.php:273
140.28277750656do_shortcode_tag( ).../shortcodes.php:273
150.28277750656bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 671
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18977195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19287198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27897719608get_template_part( ).../page.php:28
60.27897720184locate_template( ).../general-template.php:206
70.27897720312load_template( ).../template.php:720
80.27907720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.28057737800the_content( ).../content-page.php:22
100.28077738048apply_filters( ).../post-template.php:256
110.28077738448WP_Hook->apply_filters( ).../plugin.php:205
120.28257743976do_shortcode( ).../class-wp-hook.php:310
130.28277750032preg_replace_callback ( ).../shortcodes.php:273
140.28277750656do_shortcode_tag( ).../shortcodes.php:273
150.28277750656bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'residual' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 672
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18977195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19287198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27897719608get_template_part( ).../page.php:28
60.27897720184locate_template( ).../general-template.php:206
70.27897720312load_template( ).../template.php:720
80.27907720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.28057737800the_content( ).../content-page.php:22
100.28077738048apply_filters( ).../post-template.php:256
110.28077738448WP_Hook->apply_filters( ).../plugin.php:205
120.28257743976do_shortcode( ).../class-wp-hook.php:310
130.28277750032preg_replace_callback ( ).../shortcodes.php:273
140.28277750656do_shortcode_tag( ).../shortcodes.php:273
150.28277750656bicluster_info_shortcode( ).../shortcodes.php:433
ID:
# Conditions:
# Genes:
Residual:

Bicluster Motifs

Bicluster Genes

  • Rv0028
  • Rv0859
  • Rv0860
  • Rv0905
  • Rv0906
  • Rv0946c
  • Rv2498c
  • Rv2500c
  • Rv2501c
  • Rv2503c
  • Rv2504c
  • Rv2506
  • Rv2724c
  • Rv3066
  • Rv3189
  • Rv3516
  • Rv3535c
  • Rv3537
  • Rv3569c

Bicluster Conditions

  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.x
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.x
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.x
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.4
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1.x
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2.x
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1.x
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4.x
  • H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1
  • H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
  • H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3
  • H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
  • CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.1
  • CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.5
  • X0.1mM.GSNO.DMSO..6h
  • X4mM.H2O2vsctrl..2h.
  • X4mM.H2O2vsctrl..2h.A
  • X4mM.H2O2.ctrl..2h...2
  • H2O2.4mM.vs.ctrl.8h.1
  • Succinate.7H9.based.medium..1
  • Succinate.7H9.based.medium..2
  • PBS.Tween.7H9
  • PBS.Tw.DMSOvs7H9..6h
  • H37Rv.diamide.1h.rep.2
  • H37Rv.diamide.1h.rep.3
  • H37Rv.diamide.1h.rep.4
  • H37Rv.diamide.1h.rep.5
  • H37Rv.diamide.1h.rep.6
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6
  • aceatate.induction.2
  • aceatate.induction.3
  • Acetate.3mM.10m.02
  • Acetate.3mM.10m.05
  • Acetate.3mM.2h.01
  • Acetate.3mM.2h.02
  • Acetate.3mM.2h.04
  • Acetate.3mM.2h.05
  • Acetate.3mM.2h.06
  • Acetate.3mM.30m.02
  • Acetate.3mM.30m.04
  • Acetate.3mM.30m.05
  • Acetate.3mM.30m.06
  • Acetate.3mM.30m.07
  • Acetate.3mM.30m.08
  • Acetate.3mM.60m.01
  • Acetate.3mM.60m.03
  • Acetate.3mM.60m.04
  • CHP_25uM_1h_01
  • CHP_25uM_2h_01
  • Glucose_5mM_10min_01
  • Glycerol_1.
  • Glycerol_1._10M_01
  • Mtb.Erdman.strain.20.ppm.CO.rep.1
  • Mtb.Erdman.strain.200.ppm.CO.rep.1
  • Mtb.Erdman.strain.200.ppm.CO.rep.2
  • Mtb.Erdman.strain.2000.ppm.CO.rep.2
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.y
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2.y
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.y
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.y
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6.y
  • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.3
  • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.y
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3.y
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.7
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1.y
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4.y
  • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.3
  • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2.y
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4.y
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.2
  • MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.2
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.1
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.2
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.6
  • WT_140mM_NaCl_Rep1
  • WT_140mM_NaCl_Rep3
  • A00437_Q1_t30_diamide
  • A00436_Q1_t30_diamide
  • Mtm.0.2ug.mL.vs.ctrl.8h.1.y
  • Mtm.0.2ug.mL.vs.ctrl.8h.2.y