Bicluster


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Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.15927195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16217198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25597719608get_template_part( ).../page.php:28
60.25597720184locate_template( ).../general-template.php:206
70.25597720312load_template( ).../template.php:720
80.25607720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25697737800the_content( ).../content-page.php:22
100.25717738048apply_filters( ).../post-template.php:256
110.25717738448WP_Hook->apply_filters( ).../plugin.php:205
120.25807743976do_shortcode( ).../class-wp-hook.php:310
130.25817750032preg_replace_callback ( ).../shortcodes.php:273
143.98407758952do_shortcode_tag( ).../shortcodes.php:273
153.98417759424bicluster_genes_shortcode( ).../shortcodes.php:433
163.98427759928file_get_contents ( ).../short_codes.php:15

( ! ) Notice: Trying to get property 'genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 16
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.15927195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16217198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25597719608get_template_part( ).../page.php:28
60.25597720184locate_template( ).../general-template.php:206
70.25597720312load_template( ).../template.php:720
80.25607720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25697737800the_content( ).../content-page.php:22
100.25717738048apply_filters( ).../post-template.php:256
110.25717738448WP_Hook->apply_filters( ).../plugin.php:205
120.25807743976do_shortcode( ).../class-wp-hook.php:310
130.25817750032preg_replace_callback ( ).../shortcodes.php:273
143.98407758952do_shortcode_tag( ).../shortcodes.php:273
153.98417759424bicluster_genes_shortcode( ).../shortcodes.php:433

( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 18
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.15927195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16217198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25597719608get_template_part( ).../page.php:28
60.25597720184locate_template( ).../general-template.php:206
70.25597720312load_template( ).../template.php:720
80.25607720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25697737800the_content( ).../content-page.php:22
100.25717738048apply_filters( ).../post-template.php:256
110.25717738448WP_Hook->apply_filters( ).../plugin.php:205
120.25807743976do_shortcode( ).../class-wp-hook.php:310
130.25817750032preg_replace_callback ( ).../shortcodes.php:273
143.98407758952do_shortcode_tag( ).../shortcodes.php:273
153.98417759424bicluster_genes_shortcode( ).../shortcodes.php:433

( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 29
Call Stack
#TimeMemoryFunctionLocation
10.0000399816{main}( ).../index.php:0
20.0001400096require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.15927195104require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16217198848include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25597719608get_template_part( ).../page.php:28
60.25597720184locate_template( ).../general-template.php:206
70.25597720312load_template( ).../template.php:720
80.25607720624require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25697737800the_content( ).../content-page.php:22
100.25717738048apply_filters( ).../post-template.php:256
110.25717738448WP_Hook->apply_filters( ).../plugin.php:205
120.25807743976do_shortcode( ).../class-wp-hook.php:310
130.25817750032preg_replace_callback ( ).../shortcodes.php:273
143.98407758952do_shortcode_tag( ).../shortcodes.php:273
153.98417759424bicluster_genes_shortcode( ).../shortcodes.php:433
ID: 552fb3e4b744335b89d8435c
# Conditions: 127
# Genes: 13
Residual: 0.37995196473857

Bicluster Motifs

Bicluster Genes

    Bicluster Conditions

    • X4mM.H2O2vsctrl..1h.
    • X4mM.H2O2vsctrl..2h.A
    • X4mM.H2O2.ctrl..2h...1
    • X4mM.H2O2vsctrl..4h.
    • X4mM.H2O2vsctrl..4h.A
    • Succinate.7H9.based.medium..1
    • H37Rv.diamide.1h.rep.1
    • H37Rv.diamide.1h.rep.6
    • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3
    • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
    • X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.x
    • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3
    • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1
    • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.2
    • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
    • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.5
    • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.5
    • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.6
    • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.2
    • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.3
    • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.4
    • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.5
    • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.6
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.5
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.1
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.2
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.3
    • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.1
    • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.4
    • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.5
    • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.6
    • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.1
    • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.3
    • A00470_Q2_t60_diamide
    • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.4
    • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4
    • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.4
    • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.1
    • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.3
    • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.4
    • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.1
    • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.3
    • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.4
    • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.2
    • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.4
    • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1
    • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3
    • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.1
    • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.2
    • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3
    • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4
    • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.1
    • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.2
    • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.3
    • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.4
    • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.2
    • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.3
    • MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.4
    • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4
    • MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.1
    • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.1
    • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.4
    • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.5
    • MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.2
    • MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.4
    • MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.2
    • MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.4
    • MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.2
    • MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.3
    • MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.4
    • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.2
    • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.3
    • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4
    • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1
    • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.3
    • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.4
    • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.2
    • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.3
    • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.4
    • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.1
    • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.2
    • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.3
    • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.4
    • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.1
    • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.2
    • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.3
    • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.4
    • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.1
    • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.2
    • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.3
    • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.4
    • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.1
    • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.2
    • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.4
    • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.1
    • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.2
    • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3
    • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4
    • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.2
    • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.1
    • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.1
    • MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.4
    • X10ug.mL.Amikacin.EtOH..6h
    • X5ug.mL.CapvsEtOH..6h
    • X5ug.mL.CapvsEtOH..6hA
    • X10ug.mL.CapvsEtOH..6h
    • X10ug.mL.capreomycinvsEtOH..6h
    • X10ug.mL.RoxvsEtOH..6hA
    • X30ug.mL.RoxvsEtOH..6h
    • X30ug.mL.RoxvsEtOH..6hA
    • X50ug.mL.RoxvsEtOH..6h
    • X50ug.mL.RoxvsEtOH..6hA
    • X2ug.mL.SMvsEtOH..6h
    • X2ug.mL.SMvsEtOH..6hA
    • X5ug.mL.TetvsEtOH..6h
    • X10ug.mL.TetvsEtOH..6h
    • X10ug.mL.TetvsEtOH..6hA
    • H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep2
    • H37Rv.Ctrl.vs.10.ug.ml.garlic.extract.6hrs
    • X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.y
    • Tet_100uM_30M_01
    • Tet_20uM_30M_01
    • Tet_500ng_30M_01
    • Tet_50ng_30M_01
    • Tet_5ug_30M_01
    • X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A
    • X10ug.ml.capreomycin.vs.Ethanol..6hrs