Bicluster


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Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.16487193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16777197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25157718072get_template_part( ).../page.php:28
60.25157718648locate_template( ).../general-template.php:206
70.25167718776load_template( ).../template.php:720
80.25167719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25267736264the_content( ).../content-page.php:22
100.25287736512apply_filters( ).../post-template.php:256
110.25287736912WP_Hook->apply_filters( ).../plugin.php:205
120.25457742440do_shortcode( ).../class-wp-hook.php:310
130.25467748496preg_replace_callback ( ).../shortcodes.php:273
140.25467749120do_shortcode_tag( ).../shortcodes.php:273
150.25477749120bicluster_info_shortcode( ).../shortcodes.php:433
160.25487749320file_get_contents ( ).../short_codes.php:666

( ! ) Notice: Trying to get property 'bicluster' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 667
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.16487193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16777197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25157718072get_template_part( ).../page.php:28
60.25157718648locate_template( ).../general-template.php:206
70.25167718776load_template( ).../template.php:720
80.25167719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25267736264the_content( ).../content-page.php:22
100.25287736512apply_filters( ).../post-template.php:256
110.25287736912WP_Hook->apply_filters( ).../plugin.php:205
120.25457742440do_shortcode( ).../class-wp-hook.php:310
130.25467748496preg_replace_callback ( ).../shortcodes.php:273
140.25467749120do_shortcode_tag( ).../shortcodes.php:273
150.25477749120bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'id' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 669
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.16487193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16777197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25157718072get_template_part( ).../page.php:28
60.25157718648locate_template( ).../general-template.php:206
70.25167718776load_template( ).../template.php:720
80.25167719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25267736264the_content( ).../content-page.php:22
100.25287736512apply_filters( ).../post-template.php:256
110.25287736912WP_Hook->apply_filters( ).../plugin.php:205
120.25457742440do_shortcode( ).../class-wp-hook.php:310
130.25467748496preg_replace_callback ( ).../shortcodes.php:273
140.25467749120do_shortcode_tag( ).../shortcodes.php:273
150.25477749120bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_conditions' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 670
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.16487193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16777197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25157718072get_template_part( ).../page.php:28
60.25157718648locate_template( ).../general-template.php:206
70.25167718776load_template( ).../template.php:720
80.25167719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25267736264the_content( ).../content-page.php:22
100.25287736512apply_filters( ).../post-template.php:256
110.25287736912WP_Hook->apply_filters( ).../plugin.php:205
120.25457742440do_shortcode( ).../class-wp-hook.php:310
130.25467748496preg_replace_callback ( ).../shortcodes.php:273
140.25467749120do_shortcode_tag( ).../shortcodes.php:273
150.25477749120bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 671
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.16487193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16777197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25157718072get_template_part( ).../page.php:28
60.25157718648locate_template( ).../general-template.php:206
70.25167718776load_template( ).../template.php:720
80.25167719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25267736264the_content( ).../content-page.php:22
100.25287736512apply_filters( ).../post-template.php:256
110.25287736912WP_Hook->apply_filters( ).../plugin.php:205
120.25457742440do_shortcode( ).../class-wp-hook.php:310
130.25467748496preg_replace_callback ( ).../shortcodes.php:273
140.25467749120do_shortcode_tag( ).../shortcodes.php:273
150.25477749120bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'residual' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 672
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.16487193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16777197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25157718072get_template_part( ).../page.php:28
60.25157718648locate_template( ).../general-template.php:206
70.25167718776load_template( ).../template.php:720
80.25167719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25267736264the_content( ).../content-page.php:22
100.25287736512apply_filters( ).../post-template.php:256
110.25287736912WP_Hook->apply_filters( ).../plugin.php:205
120.25457742440do_shortcode( ).../class-wp-hook.php:310
130.25467748496preg_replace_callback ( ).../shortcodes.php:273
140.25467749120do_shortcode_tag( ).../shortcodes.php:273
150.25477749120bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_genes/552fb590b744335b89d84f5b): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 15
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.16487193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16777197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25157718072get_template_part( ).../page.php:28
60.25157718648locate_template( ).../general-template.php:206
70.25167718776load_template( ).../template.php:720
80.25167719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25267736264the_content( ).../content-page.php:22
100.25287736512apply_filters( ).../post-template.php:256
110.25287736912WP_Hook->apply_filters( ).../plugin.php:205
120.25457742440do_shortcode( ).../class-wp-hook.php:310
130.25467748496preg_replace_callback ( ).../shortcodes.php:273
142.32137754312do_shortcode_tag( ).../shortcodes.php:273
152.32147754784bicluster_genes_shortcode( ).../shortcodes.php:433
162.32157755288file_get_contents ( ).../short_codes.php:15

( ! ) Notice: Trying to get property 'genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 16
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.16487193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16777197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25157718072get_template_part( ).../page.php:28
60.25157718648locate_template( ).../general-template.php:206
70.25167718776load_template( ).../template.php:720
80.25167719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25267736264the_content( ).../content-page.php:22
100.25287736512apply_filters( ).../post-template.php:256
110.25287736912WP_Hook->apply_filters( ).../plugin.php:205
120.25457742440do_shortcode( ).../class-wp-hook.php:310
130.25467748496preg_replace_callback ( ).../shortcodes.php:273
142.32137754312do_shortcode_tag( ).../shortcodes.php:273
152.32147754784bicluster_genes_shortcode( ).../shortcodes.php:433

( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 18
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.16487193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16777197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25157718072get_template_part( ).../page.php:28
60.25157718648locate_template( ).../general-template.php:206
70.25167718776load_template( ).../template.php:720
80.25167719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25267736264the_content( ).../content-page.php:22
100.25287736512apply_filters( ).../post-template.php:256
110.25287736912WP_Hook->apply_filters( ).../plugin.php:205
120.25457742440do_shortcode( ).../class-wp-hook.php:310
130.25467748496preg_replace_callback ( ).../shortcodes.php:273
142.32137754312do_shortcode_tag( ).../shortcodes.php:273
152.32147754784bicluster_genes_shortcode( ).../shortcodes.php:433

( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 29
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.16487193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.16777197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.25157718072get_template_part( ).../page.php:28
60.25157718648locate_template( ).../general-template.php:206
70.25167718776load_template( ).../template.php:720
80.25167719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.25267736264the_content( ).../content-page.php:22
100.25287736512apply_filters( ).../post-template.php:256
110.25287736912WP_Hook->apply_filters( ).../plugin.php:205
120.25457742440do_shortcode( ).../class-wp-hook.php:310
130.25467748496preg_replace_callback ( ).../shortcodes.php:273
142.32137754312do_shortcode_tag( ).../shortcodes.php:273
152.32147754784bicluster_genes_shortcode( ).../shortcodes.php:433
ID:
# Conditions:
# Genes:
Residual:

Bicluster Motifs

Bicluster Genes

    Bicluster Conditions

    • H37Rv..7H9.roll.replicate.1.x
    • H37Rv..7H9.shake.replicate.1
    • H37Rv..7H9.shake.replicate.2
    • H37Rv..7H9.shake.replicate.4
    • H37Rv..Dubos.media.replicate.3
    • H37Rv..Dubos.media.replicate.4
    • H37Rv..Sauton.s.media.replicate.3
    • H37Rv..Youman.media.replicate.1
    • H37Rv..Youman.media.replicate.3
    • H37Rv..Youman.media.replicate.4
    • H37Rv..7H9.roll.replicate.1.y
    • H37Rv..7H9.roll.replicate.2.y
    • H37Rv..7H9.roll.replicate.3.y
    • H37Rv..7H9.roll.replicate.4.y
    • Strain.CDC1551..replicate.1
    • Strain.CDC1551..replicate.4
    • Strain.1006...replicate.1
    • Strain.1006...replicate.2
    • Strain.1006...replicate.4
    • Strain.1254...replicate.2
    • Strain.1254...replicate.3
    • Strain.1254...replicate.1
    • Strain.1843..replicate.1
    • Strain.1843...replicate.3
    • Strain.1843..replicate.4
    • Strain.3160...replicate.3
    • Strain.3160..replicate.4
    • Strain.9700665..replicate.1
    • Strain.9700665..replicate.2
    • Strain.9700665..replicate.3
    • Strain.9700665..replicate.4
    • Strain.9800608..replicate.1
    • Strain.9800608..replicate.2
    • Strain.9800608..replicate.4
    • Strain.9802501..replicate.2
    • Strain.9802826..replicate.1
    • Strain.9802826..replicate.3
    • Strain.M3061a..replicate.3
    • Strain.M3061a..replicate.4
    • H37Rv.Vs.M.bovis.rep1
    • H37Rv.Vs.M.bovis.rep2
    • H37Rv.Vs.M.bovis.rep3
    • H37Rv.Vs.M.bovis.rep4
    • MTB1254.Day.0.rep.2
    • MTB1254.Day.0.rep.3
    • MTB1254.vs..MTB1254.rep1
    • MTB1254.vs..MTB1254.rep2
    • MTB1254.vs..MTB1254.rep3
    • MTB1254.vs..MTB1254.rep4
    • MTB1254.vs..MTB1254.rep6
    • H37Rv.Day6.1
    • H37Rv.Day6.2
    • H37Rv.Day6.3
    • H37Rv.Day8.1
    • H37Rv.Day8.2
    • H37Rv.Day8.3
    • H37Rv.Day14.2
    • H37Rv.Day14.3
    • H37Rv.Day24.3
    • H37Rv.Day60.1
    • H37Rv.Day60.2
    • H37Rv.Day60.3
    • WT.t.6h.WT.t.0h..2
    • WT.t.0h.WT.t.6h..1
    • WT.t.0h.WT.t.6h..2
    • pH4.8vspH6.8..2h.
    • pH4.8vspH6.8..2h.A
    • pH4.8vspH6.8..2h.B
    • pH4.8vspH6.8..4h.
    • pH4.8vspH6.8..4h.A
    • pH4.8vspH6.8..4h.B
    • pH4.8vspH6.8..4h.C
    • pH4.8vspH6.8..5h.
    • pH4.8vspH6.8..6h.
    • pH4.8vspH6.8..7h.
    • pH5.2vspH6.8..2h.
    • pH5.2vspH6.8..5h.
    • pH5.2vspH6.8..5.5h.
    • pH5.2vspH6.8..10.5h.
    • pH5.6vspH6.8..2h.
    • pH5.6vspH6.8..4h.
    • pH5.6vspH6.8..4h.B
    • pH5.6vspH6.8..5h.
    • pH5.6vspH6.8..7h.
    • pH5.6vspH6.8..16h.
    • X4mM.H2O2vsctrl..2h.
    • X4mM.H2O2vsctrl..2h.A
    • X4mM.H2O2.ctrl..2h...1
    • X4mM.H2O2.ctrl..2h...2
    • X4mM.H2O2.ctrl..4h...1
    • X4mM.H2O2vsctrl..4h.
    • H2O2.4mM.vs.ctrl.8h.1
    • H37Rv.diamide.1h.rep.1
    • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
    • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
    • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
    • H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
    • Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
    • Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
    • Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
    • Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
    • Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
    • Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
    • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.1
    • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2
    • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.3
    • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.4
    • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6
    • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1
    • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2
    • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6
    • AA_10uM_10min_01
    • AA_30uM_10.min_06
    • AA_30uM_10min_03
    • AA_30uM_1h_02
    • AA_30uM_1h_04
    • AA_30uM_1h_05
    • AA_30uM_1h_08
    • AA_30uM_24h_04
    • AA_30uM_2h_06
    • AA_30uM_2h_08
    • AA_30uM_30min_02
    • AA_30uM_30min_03
    • AA_30uM_30min_05
    • AA_30uM_30min_06
    • AA_30uM_4h_01
    • AA_30uM_4h_03
    • AA_30uM_4h_05
    • AA_30uM_4h_09
    • AA_3uM_10min_02
    • aceatate.induction.1
    • aceatate.induction.2
    • aceatate.induction.3
    • Acetate.3mM.10m.01
    • Acetate.3mM.10m.07
    • Acetate.3mM.10m_04
    • Acetate.3mM.2h.01
    • Acetate.3mM.30m.01
    • Acetate.3mM.30m.07
    • Acetate.3mM.30m.08
    • Acetate.3mM.60m.04
    • L2A_30uM_10min_04
    • L2A_30uM_10min_05
    • L2A_30uM_10min_06
    • L2A_30uM_10min_07
    • L2A_30uM_1h_02
    • L2A_30uM_1h_04
    • L2A_30uM_1h_09
    • L2A_30uM_2h_03
    • L2A_30uM_30min_03
    • L2A_30uM_4h_05
    • OA_50uM_10min_02
    • OA_50uM_10min_04
    • OA_50uM_10min_05
    • OA_50uM_10min_08
    • OA_50uM_1h_03
    • OA_50uM_1h_05
    • OA_50uM_1h_06
    • OA_50uM_1h_07
    • OA_50uM_1h_10
    • OA_50uM_24h_01
    • OA_50uM_24h_02
    • OA_50uM_24h_05
    • OA_50uM_2h_01
    • OA_50uM_2h_05
    • OA_50uM_2h_06
    • OA_50uM_2h_07
    • OA_50uM_2h_10
    • OA_50uM_30min_02
    • OA_50uM_30min_04
    • OA_50uM_30min_05
    • OA_50uM_30min_06
    • OA_50uM_30min_07
    • OA_50uM_30min_08
    • OA_50uM_4h_01
    • OA_50uM_4h_02
    • OA_50uM_4h_04
    • OA_50uM_4h_08
    • PA_100uM_24h_01
    • PA_5.uM_10min_02
    • PA_50uM_12h_03
    • PA_50uM_12h_04
    • PA_50uM_1h_02
    • PA_50uM_1h_03
    • PA_50uM_1h_04
    • PA_50uM_1h_05
    • PA_50uM_1h_06
    • PA_50uM_1h_07
    • PA_50uM_1h_08
    • PA_50uM_1h_12
    • PA_50uM_24h_02
    • PA_50uM_2h_07
    • PA_50uM_30.min_04
    • PA_50uM_30.min_06
    • PA_50uM_30.min_07
    • PA_50uM_30min_03
    • PA_50uM_30min_09
    • PA_50uM_30min_10
    • PA_50uM_3d_01
    • PA_50uM_3d_02
    • PA_50uM_3d_03
    • PA_50uM_3d_05
    • PA_50uM_4h
    • PA_50uM_4h_05
    • PA_50uM_4h_06
    • PA_50uM_8h_01
    • PA_50uM_8h_03
    • PA_50uM_8h_04
    • Starvation_1254_OA50_12h_04
    • Starvation_1254_OA50_24h_01
    • Starvation_1254_OA50_3d_01
    • Starvation_1254_OA50_3d_04
    • Starvation_1254_PA50_6h_04
    • Starvation_OA50_24h_01
    • Starvation_OA50_24h_03
    • Starvation_OA50_24h_04
    • Starvation_OA50_6h_01
    • Starvation_OA50_6h_02
    • Starvation_OA50_6h_03
    • Starvation_OA50_6h_04
    • CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1
    • CDC1551.Ctrl.vs.H37Rv.rep.1
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3
    • CDC1551.ctrl.vs.ctrl.at.0.hr.rep.1
    • H37Rv.reaeration.for.1hrs.rep.1
    • H37Rv.reaeration.for.1hrs.rep.3
    • H37Rv.reaeration.for.1hrs.rep.4
    • H37Rv.reaeration.for.4hrs.rep.2
    • H37Rv.reaeration.for.4hrs.rep.3
    • H37Rv.reaeration.for.4hrs.rep.4
    • H37Rv.reaeration.for.4hrs.rep.5
    • H37Rv.reaeration.for.4hrs.rep.7
    • H37Rv.reaeration.for.4hrs.rep.8
    • H37Rv.reaeration.for.6hrs.rep.1
    • H37Rv.reaeration.for.6hrs.rep.2
    • H37Rv.reaeration.for.6hrs.rep.3
    • H37Rv.reaeration.for.6hrs.rep.4
    • H37Rv.reaeration.for.12hrs.rep.2
    • H37Rv.reaeration.for.12hrs.rep.3
    • H37Rv.reaeration.for.12hrs.rep.4
    • H37Rv.reaeration.for.24hrs.rep.1
    • H37Rv.reaeration.for.24hrs.rep.4
    • Mtb.response.to.pH.5.5..6.replicates.
    • Mtb.response.to.pH.6.5..6.replicates.
    • WT.TB.rep3
    • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.1
    • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.2
    • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
    • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.6
    • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
    • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.5
    • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.1
    • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
    • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.3
    • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.5
    • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.6
    • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.1
    • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.2
    • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.4
    • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.5
    • MTB.strain.1254.Ctrl.vs.200.mM.H202.40min.rep.6
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.1
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.2
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.4
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.5
    • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.6
    • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.3
    • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.4
    • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.5
    • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
    • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.5
    • SS_A1_RV.2
    • wild.type..mc.2.6020...biological.rep2
    • hip.mutant.KL2801..biological.rep2
    • hip.mutant.KL2825..biological.rep1
    • hip.mutant.KL2825..biological.rep2
    • hip.mutant.KL2849..biological.rep1
    • hip.mutant.KL2849..biological.rep2
    • hip.mutant.HTS1090..biological.rep1
    • hip.mutant.HTS1105..biological.rep1
    • hip.mutant.HTS1105..biological.rep2
    • hip.mutant.HT1116..biological.rep1
    • hip.mutant.HT1117..biological.rep1
    • hip.mutant.HT1120..biological.rep1
    • hip.mutant.HT1130..biological.rep2
    • hip.mutant.HT1134..biological.rep1
    • hip.mutant.HT1170..biological.rep2
    • A00470_Q1_t30_diamide
    • A00470_Q2_t60_diamide
    • A00470_Q3_t90_diamide
    • A00437_Q3_t90_diamide
    • A00436_Q2_t60_diamide