Bicluster


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Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18017193904require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18407197648include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27547734792get_template_part( ).../page.php:28
60.27547735368locate_template( ).../general-template.php:206
70.27547735496load_template( ).../template.php:720
80.27557735808require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27677736600the_content( ).../content-page.php:22
100.27707736848apply_filters( ).../post-template.php:256
110.27707737248WP_Hook->apply_filters( ).../plugin.php:205
120.27877742776do_shortcode( ).../class-wp-hook.php:310
130.27887748832preg_replace_callback ( ).../shortcodes.php:273
140.27887749456do_shortcode_tag( ).../shortcodes.php:273
150.27887749456bicluster_info_shortcode( ).../shortcodes.php:433
160.27897749656file_get_contents ( ).../short_codes.php:666

( ! ) Notice: Trying to get property 'bicluster' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 667
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18017193904require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18407197648include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27547734792get_template_part( ).../page.php:28
60.27547735368locate_template( ).../general-template.php:206
70.27547735496load_template( ).../template.php:720
80.27557735808require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27677736600the_content( ).../content-page.php:22
100.27707736848apply_filters( ).../post-template.php:256
110.27707737248WP_Hook->apply_filters( ).../plugin.php:205
120.27877742776do_shortcode( ).../class-wp-hook.php:310
130.27887748832preg_replace_callback ( ).../shortcodes.php:273
140.27887749456do_shortcode_tag( ).../shortcodes.php:273
150.27887749456bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'id' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 669
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18017193904require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18407197648include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27547734792get_template_part( ).../page.php:28
60.27547735368locate_template( ).../general-template.php:206
70.27547735496load_template( ).../template.php:720
80.27557735808require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27677736600the_content( ).../content-page.php:22
100.27707736848apply_filters( ).../post-template.php:256
110.27707737248WP_Hook->apply_filters( ).../plugin.php:205
120.27877742776do_shortcode( ).../class-wp-hook.php:310
130.27887748832preg_replace_callback ( ).../shortcodes.php:273
140.27887749456do_shortcode_tag( ).../shortcodes.php:273
150.27887749456bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_conditions' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 670
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18017193904require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18407197648include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27547734792get_template_part( ).../page.php:28
60.27547735368locate_template( ).../general-template.php:206
70.27547735496load_template( ).../template.php:720
80.27557735808require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27677736600the_content( ).../content-page.php:22
100.27707736848apply_filters( ).../post-template.php:256
110.27707737248WP_Hook->apply_filters( ).../plugin.php:205
120.27877742776do_shortcode( ).../class-wp-hook.php:310
130.27887748832preg_replace_callback ( ).../shortcodes.php:273
140.27887749456do_shortcode_tag( ).../shortcodes.php:273
150.27887749456bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 671
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18017193904require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18407197648include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27547734792get_template_part( ).../page.php:28
60.27547735368locate_template( ).../general-template.php:206
70.27547735496load_template( ).../template.php:720
80.27557735808require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27677736600the_content( ).../content-page.php:22
100.27707736848apply_filters( ).../post-template.php:256
110.27707737248WP_Hook->apply_filters( ).../plugin.php:205
120.27877742776do_shortcode( ).../class-wp-hook.php:310
130.27887748832preg_replace_callback ( ).../shortcodes.php:273
140.27887749456do_shortcode_tag( ).../shortcodes.php:273
150.27887749456bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'residual' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 672
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18017193904require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18407197648include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27547734792get_template_part( ).../page.php:28
60.27547735368locate_template( ).../general-template.php:206
70.27547735496load_template( ).../template.php:720
80.27557735808require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27677736600the_content( ).../content-page.php:22
100.27707736848apply_filters( ).../post-template.php:256
110.27707737248WP_Hook->apply_filters( ).../plugin.php:205
120.27877742776do_shortcode( ).../class-wp-hook.php:310
130.27887748832preg_replace_callback ( ).../shortcodes.php:273
140.27887749456do_shortcode_tag( ).../shortcodes.php:273
150.27887749456bicluster_info_shortcode( ).../shortcodes.php:433

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Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18017193904require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18407197648include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27547734792get_template_part( ).../page.php:28
60.27547735368locate_template( ).../general-template.php:206
70.27547735496load_template( ).../template.php:720
80.27557735808require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27677736600the_content( ).../content-page.php:22
100.27707736848apply_filters( ).../post-template.php:256
110.27707737248WP_Hook->apply_filters( ).../plugin.php:205
120.27877742776do_shortcode( ).../class-wp-hook.php:310
130.27887748832preg_replace_callback ( ).../shortcodes.php:273
140.63317750688do_shortcode_tag( ).../shortcodes.php:273
150.63327750688bicluster_motifs_shortcode( ).../shortcodes.php:433
160.63337750816file_get_contents ( ).../short_codes.php:74

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Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18017193904require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18407197648include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27547734792get_template_part( ).../page.php:28
60.27547735368locate_template( ).../general-template.php:206
70.27547735496load_template( ).../template.php:720
80.27557735808require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27677736600the_content( ).../content-page.php:22
100.27707736848apply_filters( ).../post-template.php:256
110.27707737248WP_Hook->apply_filters( ).../plugin.php:205
120.27877742776do_shortcode( ).../class-wp-hook.php:310
130.27887748832preg_replace_callback ( ).../shortcodes.php:273
141.23767751832do_shortcode_tag( ).../shortcodes.php:273
151.23777752304bicluster_genes_shortcode( ).../shortcodes.php:433
161.23787752808file_get_contents ( ).../short_codes.php:15

( ! ) Notice: Trying to get property 'genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 16
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18017193904require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18407197648include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27547734792get_template_part( ).../page.php:28
60.27547735368locate_template( ).../general-template.php:206
70.27547735496load_template( ).../template.php:720
80.27557735808require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27677736600the_content( ).../content-page.php:22
100.27707736848apply_filters( ).../post-template.php:256
110.27707737248WP_Hook->apply_filters( ).../plugin.php:205
120.27877742776do_shortcode( ).../class-wp-hook.php:310
130.27887748832preg_replace_callback ( ).../shortcodes.php:273
141.23767751832do_shortcode_tag( ).../shortcodes.php:273
151.23777752304bicluster_genes_shortcode( ).../shortcodes.php:433

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Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18017193904require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18407197648include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27547734792get_template_part( ).../page.php:28
60.27547735368locate_template( ).../general-template.php:206
70.27547735496load_template( ).../template.php:720
80.27557735808require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27677736600the_content( ).../content-page.php:22
100.27707736848apply_filters( ).../post-template.php:256
110.27707737248WP_Hook->apply_filters( ).../plugin.php:205
120.27877742776do_shortcode( ).../class-wp-hook.php:310
130.27887748832preg_replace_callback ( ).../shortcodes.php:273
141.23767751832do_shortcode_tag( ).../shortcodes.php:273
151.23777752304bicluster_genes_shortcode( ).../shortcodes.php:433

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Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18017193904require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.18407197648include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.27547734792get_template_part( ).../page.php:28
60.27547735368locate_template( ).../general-template.php:206
70.27547735496load_template( ).../template.php:720
80.27557735808require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.27677736600the_content( ).../content-page.php:22
100.27707736848apply_filters( ).../post-template.php:256
110.27707737248WP_Hook->apply_filters( ).../plugin.php:205
120.27877742776do_shortcode( ).../class-wp-hook.php:310
130.27887748832preg_replace_callback ( ).../shortcodes.php:273
141.23767751832do_shortcode_tag( ).../shortcodes.php:273
151.23777752304bicluster_genes_shortcode( ).../shortcodes.php:433
ID:
# Conditions:
# Genes:
Residual:

Bicluster Motifs

Bicluster Genes

    Bicluster Conditions

    • Strain.CDC1551..replicate.1
    • Strain.CDC1551..replicate.2
    • Strain.CDC1551..replicate.3
    • Strain.1006...replicate.1
    • Strain.1006...replicate.2
    • Strain.1006...replicate.4
    • Strain.1254...replicate.4
    • Strain.1254...replicate.2
    • Strain.1254...replicate.3
    • Strain.1254...replicate.1
    • Strain.1843...replicate.2
    • Strain.1843...replicate.3
    • Strain.3160..replicate.1
    • Strain.3160...replicate.3
    • Strain.3160..replicate.4
    • Strain.9700665..replicate.3
    • Strain.9800608..replicate.2
    • Strain.9800608..replicate.4
    • Strain.9802501..replicate1
    • Strain.9802501..replicate.2
    • Strain.9802501..replicate.3
    • Strain.9802826..replicate.3
    • Strain.M3061a..replicate.1
    • Strain.M3061a..replicate.3
    • H37Rv.Vs.M.bovis.rep1
    • H37Rv.Vs.M.bovis.rep2
    • X0.1ug.mL.Mtmvsctrl..0.75h..x
    • X0.1ug.mL.Mtmvsctrl..1.5h..x
    • X0.2ug.mL.Mtmvsctrl..0.33h..x
    • X0.2ug.mL.Mtmvsctrl..0.75h..x
    • X0.2ug.mL.Mtmvsctrl..1.5h..x
    • X0.2ug.mL.Mtmvsctrl..2h..x
    • X0.2ug.mL.Mtmvsctrl..2h.A.x
    • X0.2ug.mL.Mtmvsctrl..2h.B.x
    • X0.2ug.mL.Mtmvsctrl..2h.C.x
    • X0.2ug.mL.Mtmvsctrl..4h..x
    • X0.2ug.mL.Mtm.ctrl..4h...1.x
    • X0.2ug.mL.Mtm.ctrl..4h...2.x
    • PBS.Tween.7H9
    • PBS.Tw.DMSOvs7H9..6h
    • H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
    • Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
    • Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
    • Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
    • Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
    • Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
    • Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
    • Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3
    • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.1
    • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.4
    • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5
    • H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6
    • Glycerol_1._10M_01
    • CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.2
    • CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3
    • CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.1
    • CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.1
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.4
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.1
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.2
    • BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3
    • Mtb.Erdman.strain.20.ppm.CO.rep.1
    • Mtb.Erdman.strain.20.ppm.CO.rep.2
    • Mtb.Erdman.strain.2000.ppm.CO.rep.1
    • Mtb.Erdman.strain.2000.ppm.CO.rep.2
    • hip.mutant.KL2801..biological.rep1
    • hip.mutant.KL2825..biological.rep2
    • hip.mutant.KL2849..biological.rep1
    • hip.mutant.HTS1105..biological.rep1
    • hip.mutant.HTS1105..biological.rep2
    • hip.mutant.HT1116..biological.rep2
    • hip.mutant.HT1120..biological.rep2
    • hip.mutant.HT1130..biological.rep1
    • hip.mutant.HT1134..biological.rep1
    • hip.mutant.HT1134..biological.rep2
    • hip.mutant.HT1137..biological.rep1
    • hip.mutant.HT1137..biological.rep2
    • hip.mutant.HT1170..biological.rep1
    • hip.mutant.HT1170..biological.rep2
    • X20ug.mL.Prcp.6776.DMSO..6h..1
    • X20ug.mL.Procept6776vsDMSO..6h
    • X30ug.mLProcept6776vsDMSO.6hA
    • X20ug.mL.Prcp.6778.DMSO..6h..1
    • X20ug.mLProcept6778vsDMSO.6hA
    • X20ug.mLProcept6778vsDMSO.6hB
    • X40ug.mLProcept6778vsDMSO.6h
    • X10ug.mL.PA.1vsDMSO..6hA
    • X10ug.mL.PA.1vsDMSO..6hB
    • X50ug.mL.PA.1vsDMSO..6h
    • X0.2ug.mL.PA824.DMSO..6h..1
    • X0.2ug.mL.PA824.DMSO..6h..2
    • X0.4ug.mL.PA824.DMSO..6h..1
    • X0.1ug.mL.Mtmvsctrl..1.5h..y
    • X0.2ug.mL.Mtmvsctrl..2h..y
    • X0.2ug.mL.Mtmvsctrl..2h.B.y
    • X0.2ug.mL.Mtmvsctrl..4h..y
    • X0.2ug.mL.Mtmvsctrl..4h.B.y
    • X0.2ug.mL.Mtm.ctrl..4h...2.y
    • X12.5ug.mL.AntimycinvsDMSO..6h
    • X2mM.DTNBvsDMSO
    • X10ug.mL.LevovsEtOH..6hA
    • X10ug.mLMethoxatinvsDMSO.6h
    • X2mMb.mercaptoethanolvsDMSO.6h
    • X10ug.mL.OfloxvsDMSO..6h
    • X10ug.mL.OfloxvsDMSO..6hA
    • X50ug.mL.VerapamilvsDMSO..6h
    • X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1
    • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.1
    • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.x
    • X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.y
    • MTB.at.T30..biological.rep2
    • MTB.at.T60..biological.rep2
    • MTB.at.T180..biological.rep4
    • MTB.at.T360..biological.rep1