Bicluster


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Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19557193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20007197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30187718072get_template_part( ).../page.php:28
60.30187718648locate_template( ).../general-template.php:206
70.30187718776load_template( ).../template.php:720
80.30197719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30297736264the_content( ).../content-page.php:22
100.30317736512apply_filters( ).../post-template.php:256
110.30317736912WP_Hook->apply_filters( ).../plugin.php:205
120.30457742440do_shortcode( ).../class-wp-hook.php:310
130.30467748496preg_replace_callback ( ).../shortcodes.php:273
140.30467749120do_shortcode_tag( ).../shortcodes.php:273
150.30467749120bicluster_info_shortcode( ).../shortcodes.php:433
160.30477749320file_get_contents ( ).../short_codes.php:666
( ! ) Notice: Trying to get property 'bicluster' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 667
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19557193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20007197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30187718072get_template_part( ).../page.php:28
60.30187718648locate_template( ).../general-template.php:206
70.30187718776load_template( ).../template.php:720
80.30197719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30297736264the_content( ).../content-page.php:22
100.30317736512apply_filters( ).../post-template.php:256
110.30317736912WP_Hook->apply_filters( ).../plugin.php:205
120.30457742440do_shortcode( ).../class-wp-hook.php:310
130.30467748496preg_replace_callback ( ).../shortcodes.php:273
140.30467749120do_shortcode_tag( ).../shortcodes.php:273
150.30467749120bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Notice: Trying to get property 'id' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 669
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19557193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20007197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30187718072get_template_part( ).../page.php:28
60.30187718648locate_template( ).../general-template.php:206
70.30187718776load_template( ).../template.php:720
80.30197719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30297736264the_content( ).../content-page.php:22
100.30317736512apply_filters( ).../post-template.php:256
110.30317736912WP_Hook->apply_filters( ).../plugin.php:205
120.30457742440do_shortcode( ).../class-wp-hook.php:310
130.30467748496preg_replace_callback ( ).../shortcodes.php:273
140.30467749120do_shortcode_tag( ).../shortcodes.php:273
150.30467749120bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Notice: Trying to get property 'num_conditions' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 670
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19557193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20007197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30187718072get_template_part( ).../page.php:28
60.30187718648locate_template( ).../general-template.php:206
70.30187718776load_template( ).../template.php:720
80.30197719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30297736264the_content( ).../content-page.php:22
100.30317736512apply_filters( ).../post-template.php:256
110.30317736912WP_Hook->apply_filters( ).../plugin.php:205
120.30457742440do_shortcode( ).../class-wp-hook.php:310
130.30467748496preg_replace_callback ( ).../shortcodes.php:273
140.30467749120do_shortcode_tag( ).../shortcodes.php:273
150.30467749120bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Notice: Trying to get property 'num_genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 671
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19557193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20007197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30187718072get_template_part( ).../page.php:28
60.30187718648locate_template( ).../general-template.php:206
70.30187718776load_template( ).../template.php:720
80.30197719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30297736264the_content( ).../content-page.php:22
100.30317736512apply_filters( ).../post-template.php:256
110.30317736912WP_Hook->apply_filters( ).../plugin.php:205
120.30457742440do_shortcode( ).../class-wp-hook.php:310
130.30467748496preg_replace_callback ( ).../shortcodes.php:273
140.30467749120do_shortcode_tag( ).../shortcodes.php:273
150.30467749120bicluster_info_shortcode( ).../shortcodes.php:433
( ! ) Notice: Trying to get property 'residual' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 672
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.19557193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.20007197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30187718072get_template_part( ).../page.php:28
60.30187718648locate_template( ).../general-template.php:206
70.30187718776load_template( ).../template.php:720
80.30197719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30297736264the_content( ).../content-page.php:22
100.30317736512apply_filters( ).../post-template.php:256
110.30317736912WP_Hook->apply_filters( ).../plugin.php:205
120.30457742440do_shortcode( ).../class-wp-hook.php:310
130.30467748496preg_replace_callback ( ).../shortcodes.php:273
140.30467749120do_shortcode_tag( ).../shortcodes.php:273
150.30467749120bicluster_info_shortcode( ).../shortcodes.php:433
ID:
# Conditions:
# Genes:
Residual:

Bicluster Motifs

Bicluster Genes

  • Rv0269c
  • Rv0796
  • Rv0911
  • Rv1069c
  • Rv1153c
  • Rv1193
  • Rv1549
  • Rv1752
  • Rv1949c
  • Rv2230c
  • Rv2401
  • Rv2549c
  • Rv2577
  • Rv2607
  • Rv2747
  • Rv3255c
  • Rv3293
  • Rv3355c
  • Rv3361c
  • Rv3509c
  • Rv3655c
  • Rv3670
  • Rv3911

Bicluster Conditions

  • MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.3
  • X1ug.mL..59vsDMSO..6h
  • X1ug.mL..59vsDMSO..6hA
  • X10ug.mL..59.DMSO..6h
  • X10ug.mL..59vsDMSO..6h
  • X10ug.mL..59vsDMSO..6hA
  • X1ug.mL..109vsDMSO..6h
  • X1ug.mL..109vsDMSO..6hA
  • X10ug.mL..109.DMSO..6h
  • X10ug.mL..109vsDMSO..6h
  • X10ug.mL..109vsDMSO..6hA
  • X.109..1ug.mL..vs.DMSO..12h..replicate.2..GEO.acc.GSM28052.
  • X.109..10ug.mL..vs.DMSO..12h..replicate.1..GEO.acc..GSM28053.
  • X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054.
  • X1ug.mL..241vsDMSO..6h
  • X1ug.mL..241vsDMSO..6hA
  • X10ug.mL..241.DMSO..6h
  • X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046.
  • X.241..1ug.mL..DMSO..12h..1
  • X.241..10ug.mL..DMSO..12h..1
  • X.241..10ug.mL..DMSO..12h..2
  • X0.1mMGSNO.10ug.mLmdvsDMSO.6hA
  • X0.1mMGSNO.20ug.mLCPZvsDMSO.6hA
  • X5ug.mL.CFZ.0.1mM.GSNO.DMSO..1
  • X0.1mMGSNO.5ug.mLKCNvsDMSO.6h
  • DIPED.50ug.mL.vs.DMSO.12h.1
  • X0.1mg.mL.TriclosanvsEtOH..6h
  • X0.1mg.mL.TriclosanvsEtOH..6hA
  • X0.15mg.mL.TricvsEtOH..6h
  • X0.15mg.mL.TricvsEtOH..6hA
  • X10ug.mL.TriclosanvsDMSO..6hA
  • X10ug.mL.TriclosanvsDMSO..6hB
  • X50ug.mL.Triclosan.EtOH
  • X50ug.mL.TriclosanvsEtOH..6h
  • X50ug.mL.TriclosanvsEtOH..6hA
  • X100ug.mL.TriclosanvsEtOH..6h
  • X100ug.mL.TriclosanvsEtOH..6hA
  • X24ug.mL.Econazole.DMSO..6h..1
  • EMB.10ug.mL.vs.DMSO.12h.1
  • EMB.10ug.mL.vs.DMSO.12h.2
  • EMB.10ug.mL.vs.DMSO.12h.3
  • EMB.10ug.mL.vs.DMSO.12h.4
  • X20ug.mL.ethambutol.DMSO
  • X0.2mg.mL.AmpvsEtOH..6hA
  • X13ug.mL.clfzine.DMSO..6h..1
  • X13ug.mL.clfzine.DMSO..6h..2
  • X0.5ug.mL.CervsEtOH..6h
  • X100ug.mL.Cephalexin.Ctrl..6h
  • X10ug.mLchlorpromazinevsctrl.6h
  • X10ug.mL.ChlorprovsEtOH
  • X10ug.mL.ChlorprovsEtOH..6h
  • X20ug.mL.chlorprmz.DMSO..6h..2
  • X60ug.mL.ChlorprovsEtOH..6h
  • X24ug.mL.cltrmazole.DMS..6h..1
  • X24ug.mL.cltrmazole.DMS..6h..3
  • X50uM.CCCP.DMSO..6h..1
  • X0.5mM.DNP.DMSO..6h
  • X1mM.DNP.DMSO..6h..1
  • X1mM.DNP.DMSO..6h..2
  • X20uM.DCCD.DMSO..6h..1
  • X20uM.DCCD.DMSO..6h..2
  • X100uM.DCCD.DMSO..6h
  • X40ug.mL.EtavsEtOH..6h
  • X0.4ug.mL.INHvsEtOH..6h
  • X0.4ug.mL.INHvsEtOH..6hA
  • X20ug.mL.KCN.DMSO..6h
  • X6ug.mL.MenadionevsDMSO..6h
  • X130ug.mL.TLMvsDMSO..6h
  • X0.13mg.mL.TLMvsDMSO..6h
  • X0.13mg.mL.TLMvsDMSO..6hA
  • X0.2mg.mL.TLMvsEtOH..6h
  • X0.5uMValinomycinvsDMSO.6h
  • X1uM.ValinomycinvsDMSO..6h.A
  • X0.5uMValinomycin.70mMKClvsDMSO.6h
  • X2mM.ZnSO4.DMSO..6h
  • X20ug.ml.KCN.vs.DMSO.6hrs.y
  • X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.1
  • X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.2
  • X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.3.x
  • X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.x
  • X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
  • X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1
  • X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2
  • X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.1
  • X130ug.ml.TLM.vs.DMSO.6hrs.rep.2
  • X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.2
  • X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.2
  • X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.3
  • X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.1
  • X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2
  • X0.2mg.ml.Ampicillin.vs.Ethanol.6hrs
  • X10ug.ml.Ethambutol.vs.DMSO.12hrs.3
  • X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.y
  • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.2
  • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.1
  • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.2
  • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1
  • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.2
  • CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.1
  • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.1
  • CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.2
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.1
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.2
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.3
  • H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
  • H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
  • H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
  • H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.2
  • H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1
  • H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.2
  • H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.1
  • H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.1
  • H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.2