Bicluster


( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_info/552fd1bcb744335b89d8fd47): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 666
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18807193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19117197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.28207718072get_template_part( ).../page.php:28
60.28207718648locate_template( ).../general-template.php:206
70.28217718776load_template( ).../template.php:720
80.28217719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.28357736264the_content( ).../content-page.php:22
100.28387736512apply_filters( ).../post-template.php:256
110.28387736912WP_Hook->apply_filters( ).../plugin.php:205
120.28527742440do_shortcode( ).../class-wp-hook.php:310
130.28547748496preg_replace_callback ( ).../shortcodes.php:273
140.28547749120do_shortcode_tag( ).../shortcodes.php:273
150.28547749120bicluster_info_shortcode( ).../shortcodes.php:433
160.28547749320file_get_contents ( ).../short_codes.php:666

( ! ) Notice: Trying to get property 'bicluster' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 667
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18807193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19117197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.28207718072get_template_part( ).../page.php:28
60.28207718648locate_template( ).../general-template.php:206
70.28217718776load_template( ).../template.php:720
80.28217719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.28357736264the_content( ).../content-page.php:22
100.28387736512apply_filters( ).../post-template.php:256
110.28387736912WP_Hook->apply_filters( ).../plugin.php:205
120.28527742440do_shortcode( ).../class-wp-hook.php:310
130.28547748496preg_replace_callback ( ).../shortcodes.php:273
140.28547749120do_shortcode_tag( ).../shortcodes.php:273
150.28547749120bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'id' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 669
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18807193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19117197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.28207718072get_template_part( ).../page.php:28
60.28207718648locate_template( ).../general-template.php:206
70.28217718776load_template( ).../template.php:720
80.28217719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.28357736264the_content( ).../content-page.php:22
100.28387736512apply_filters( ).../post-template.php:256
110.28387736912WP_Hook->apply_filters( ).../plugin.php:205
120.28527742440do_shortcode( ).../class-wp-hook.php:310
130.28547748496preg_replace_callback ( ).../shortcodes.php:273
140.28547749120do_shortcode_tag( ).../shortcodes.php:273
150.28547749120bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_conditions' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 670
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18807193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19117197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.28207718072get_template_part( ).../page.php:28
60.28207718648locate_template( ).../general-template.php:206
70.28217718776load_template( ).../template.php:720
80.28217719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.28357736264the_content( ).../content-page.php:22
100.28387736512apply_filters( ).../post-template.php:256
110.28387736912WP_Hook->apply_filters( ).../plugin.php:205
120.28527742440do_shortcode( ).../class-wp-hook.php:310
130.28547748496preg_replace_callback ( ).../shortcodes.php:273
140.28547749120do_shortcode_tag( ).../shortcodes.php:273
150.28547749120bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'num_genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 671
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18807193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19117197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.28207718072get_template_part( ).../page.php:28
60.28207718648locate_template( ).../general-template.php:206
70.28217718776load_template( ).../template.php:720
80.28217719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.28357736264the_content( ).../content-page.php:22
100.28387736512apply_filters( ).../post-template.php:256
110.28387736912WP_Hook->apply_filters( ).../plugin.php:205
120.28527742440do_shortcode( ).../class-wp-hook.php:310
130.28547748496preg_replace_callback ( ).../shortcodes.php:273
140.28547749120do_shortcode_tag( ).../shortcodes.php:273
150.28547749120bicluster_info_shortcode( ).../shortcodes.php:433

( ! ) Notice: Trying to get property 'residual' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 672
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18807193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19117197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.28207718072get_template_part( ).../page.php:28
60.28207718648locate_template( ).../general-template.php:206
70.28217718776load_template( ).../template.php:720
80.28217719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.28357736264the_content( ).../content-page.php:22
100.28387736512apply_filters( ).../post-template.php:256
110.28387736912WP_Hook->apply_filters( ).../plugin.php:205
120.28527742440do_shortcode( ).../class-wp-hook.php:310
130.28547748496preg_replace_callback ( ).../shortcodes.php:273
140.28547749120do_shortcode_tag( ).../shortcodes.php:273
150.28547749120bicluster_info_shortcode( ).../shortcodes.php:433
ID:
# Conditions:
# Genes:
Residual:

Bicluster Motifs

Bicluster Genes

  • Rv0454
  • Rv0653c
  • Rv1150
  • Rv1373
  • Rv1574
  • Rv1707
  • Rv1896c
  • Rv1958c
  • Rv2076c
  • Rv2138
  • Rv2815c
  • Rv3062
  • Rv3309c

Bicluster Conditions

  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.x
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.x
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.x
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.x
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6.x
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3.x
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4.x
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1.x
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4.x
  • H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1
  • H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
  • H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3
  • CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.1
  • CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.3
  • CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.4
  • CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.5
  • MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1
  • MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2
  • H37Rv.hypoxia.2hr.rep.1
  • H37Rv.hypoxia.2hr.rep.3
  • H37Rv.hypoxia.2hr.rep.4
  • H37Rv.hypoxia.2hr.rep.5
  • H37Rv.hypoxia.2hr.rep.6
  • NRP.Day6..1
  • NRP.Day6..3
  • NRP.Day10..3
  • NRP.Day12..1
  • NRP.Day14..1
  • NRP.Day14..4
  • NRP.Day14..6
  • NRP.Day14..8
  • NRP.Day14..9
  • NRP.Day20..1
  • NRP.Day20..2
  • NRP.Day30..1
  • X0.1mM.GSNO.DMSO..6h
  • X0.1mM.GSNOvsDMSO..6h.A
  • H37Rv.hypoxia.8hr.rep.2
  • H37Rv.hypoxia.8hr.rep.3
  • H37Rv.hypoxia.12hr.rep.2
  • H37Rv.hypoxia.1.day.rep.3
  • H37Rv.hypoxia.1.day.rep.6
  • H37Rv.hypoxia.1.day.rep.10
  • H37Rv.hypoxia.4.day.rep.1
  • H37Rv.hypoxia.4.day.rep.2
  • H37Rv.hypoxia.4.day.rep.4
  • H37Rv.hypoxia.4.day.rep.6
  • H37Rv.hypoxia.4.day.rep.7
  • H37Rv.hypoxia.7.day.rep.1
  • H37Rv.hypoxia.7.day.rep.6
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.y
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.y
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.y
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.y
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.y
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.7
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.4
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1.y
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2.y
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3.y
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4.y
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.3.y
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4.y
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1.y
  • MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.1
  • MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.2
  • MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.3
  • SG2.A0_N02A01c3
  • SG2.B0_N02A09c3
  • SG6.G0_N5A02cy.5
  • SG6.H0_N5A03cy.5
  • SG6_A0_N7A10cy.3
  • SG7.AT0_N11A01cy.5
  • SG7.CT0_N11A03cy.5
  • SG7.DT0_N11A04cy.5
  • SG.ISB.3.0A_N30A01cy.3
  • SG.ISB.3.0B_N30A01cy.5
  • SG8.C.Day.1_N37A11cy.5
  • SG8.D.Day.1_N27A12cy.3
  • SG8.A.Day.1_fix_N37A03cy.5
  • SG7.CT1_N11A07cy.5
  • SG7.AT1_N11A05cy.5
  • SG6_B1_N7A11cy.5
  • SG6_A1_N7A11cy.3
  • SG8.A.Day.2_N37A08cy.3
  • SG8.C.Day.2_N37A12cy.5
  • SG8.B.Day.2_N37A06cy.5
  • SG2.A2_N02A03c3
  • SG2.B2_N02A11c3
  • SG8.A.Day.3_N37A09cy.3
  • SG8.B.Day.3_N37A07cy.5
  • SG8.A.Day.5_N37A10cy.3
  • SG8.B.Day.5_N37A08cy.5
  • SG2.B7_N02A10c5
  • SG6D.T7_N11A02cy.3
  • SG6C.T7_N11A01cy.3
  • SG8.B.Day.7_N37A09cy.5
  • SG8.A.Day.7_N37A11cy.3
  • SG.ISB.3.7A_N30A02cy.5
  • SG.ISB.3.7D_N30A04cy.3
  • SG12.B0_N32A09cy.3
  • SG12.A1_N32A02cy.3
  • SG12.B1_N32A10cy.3
  • SG12.C1_N32A06cy.5
  • SG12.A2_N32A03cy.3
  • SG12.A4_N32A04cy.3
  • SG6.C8_N5A08cy.5
  • SG6.A8_N5A06cy.5
  • SG7.T8A_N11A05cy.3
  • SG7.T8D_N11A08cy.3
  • SG.ISB.3.8A_N30A04cy.5
  • SG.ISB.3.8B_N30A05cy.3
  • SG.ISB.3.8C_N30A05cy.5
  • SG2.A9_N02A08c3
  • SG2.D9_N02A08c5
  • SG6.D11_N8A09cy.5
  • SG6.B11_N5A11cy.5
  • SG6.A11_N5A10cy.5
  • SG7.T12D_N11A12cy.3
  • SG7.T12B_N11A10cy.3
  • SG7.T12A_N11A09cy.3
  • SG12.C120_N32A12cy.5
  • SG.ISB.3.12A_N30A06cy.5
  • SG6.A14_N8A10cy.5
  • SG6.B14_N8A11cy.5
  • SG6.C14_N8A12cy.5