Bicluster

Bicluster Motifs

Bicluster Genes

• Rv0403c
• Rv0572c
• Rv0645c
• Rv0728c
• Rv0976c
• Rv0982
• Rv1733c
• Rv1735c
• Rv1743
• Rv1750c
• Rv1823
• Rv1926c
• Rv2175c
• Rv2561
• Rv2705c
• Rv2807
• Rv2843
• Rv2897c
• Rv3271c
• Rv3623
• Rv3749c
• Rv3817

Bicluster Conditions

• Strain.CDC1551..replicate.4
• Strain.1006...replicate.1
• Strain.1843..replicate.1
• Strain.1843...replicate.3
• Strain.3160..replicate.1
• Strain.3160..replicate.2
• Strain.3160...replicate.3
• Strain.9700665..replicate.2
• Strain.9700665..replicate.4
• Strain.9800608..replicate.1
• Strain.9800608..replicate.2
• Strain.9802501..replicate.3
• Strain.9802501..replicate.4
• Strain.9802826..replicate.2
• Strain.M3061a..replicate.1
• Strain.M3061a..replicate.2
• Strain.M3061a..replicate.3
• Strain.M3061a..replicate.4
• H37Rv.Vs.M.bovis.rep1
• H37Rv.Vs.M.bovis.rep2
• H37Rv.Vs.M.bovis.rep3
• High.iron.wt.vs.low.iron.wt.2b
• High.iron.wt.vs.low.iron.wt.3a
• H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
• H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
• H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
• H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
• Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2
• Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
• Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
• Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1
• Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3
• Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1
• Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2
• H37Rv.wild.type.Vs.H37Rv.wild.type.rep.3
• H37Rv.wild.type.Vs.H37Rv.wild.type.rep.4
• X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.x
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
• H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
• H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
• Glycerol_1.
• Glycerol_1._10M_01
• H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.2
• H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1
• H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3
• CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2
• CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1
• CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.2
• Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
• Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
• H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.4
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.1
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.4
• BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.5
• H37Rv.reaeration.for.1hrs.rep.8
• H37Rv.reaeration.for.4hrs.rep.5
• H37Rv.reaeration.for.4hrs.rep.6
• H37Rv.reaeration.for.4hrs.rep.8
• H37Rv.reaeration.for.6hrs.rep.2
• H37Rv.reaeration.for.6hrs.rep.3
• H37Rv.reaeration.for.6hrs.rep.4
• H37Rv.reaeration.for.12hrs.rep.2
• H37Rv.reaeration.for.12hrs.rep.4
• H37Rv.reaeration.for.24hrs.rep.3
• H37Rv.reaeration.for.24hrs.rep.5
• H37Rv.reaeration.for.24hrs.rep.6
• MTB.in.Wild.type.macrophages.for.24hrs
• MTB.in.Wild.type.macrophages.for.48hrs
• MTB.in.Wild.type.macrophages...IFNg.for.48hrs
• Russell_Lab_Spotted_Oligos_1.2..14.day.resting.macrophage.infection.2hr..rep.2..Russell_Lab_Spotted_Oligos_1.2..
• Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
• hip.mutant.KL2849..biological.rep2
• hip.mutant.HT1120..biological.rep2
• MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.1
• MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.3
• MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.4
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.2
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.3
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4
• MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.1
• MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.2
• MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.3
• MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.4
• MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.1
• MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.2
• MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.3
• MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.4
• MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.1
• MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.2
• MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.3
• MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.4
• MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.1
• MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.2
• MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.3
• MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.4
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.2
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.4
• MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.1
• MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.2
• MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3
• MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4
• MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.1
• MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.2
• MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.3
• MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.4
• MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.1
• MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.2
• MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.3
• MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.4
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.1
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.3
• MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.4
• MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.1
• MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.2
• MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.3
• MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.4
• MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.5
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.1
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.2
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.3
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.4
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.5
• MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.1
• MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.2
• MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.3
• MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.4
• MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.1
• MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.2
• MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.3
• MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.4
• MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.1
• MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.2
• MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.3
• MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.4
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.1
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.2
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.3
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.1
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.3
• MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4
• MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1
• MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.2
• MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.3
• MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.4
• MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.1
• MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.2
• MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.3
• MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.4
• MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.1
• MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.2
• MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.3
• MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.4
• MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.1
• MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.2
• MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.3
• MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.4
• MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.1
• MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.2
• MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.3
• MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.1
• MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.2
• MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.4
• MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.1
• MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.2
• MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3
• MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1
• MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.2
• MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.1
• MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.2
• MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.4
• MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.2
• MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.4
• MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.4
• X20ug.mL.Procept6776vsDMSO..6h
• X40ug.mLProcept6778vsDMSO.6h
• X40ug.mLProcept6778vsDMSO.6hA
• X1.ug.mL..111891vsDMSO..6h
• X1ug.mL..111891vsDMSO..6h
• X2ug.mL..111891vsDMSO..6h
• X1ug.mL..111891.DMSO..12h..2
• X0.5ug.mL..111895vsDMSO..6h
• X0.5ug.mL..111895vsDMSO.6h
• X1ug.mL..111895vsDMSO..6hA
• X2ug.mL..111895vsDMSO..6hB
• X0.5ug.mL..121940vsDMSO.6h
• X1ug.mL..124196vsDMSO..6h
• X10ug.mL.PA.1vsDMSO..6h
• X10ug.mL.PA.1vsDMSO..6hA
• X10ug.mL.PA.1vsDMSO..6hB
• X50ug.mL.PA.1vsDMSO..6h
• X10ug.mL.PA.21vsDMSO..6h
• X10ug.mL.PA.21vsDMSO..6hA
• X50ug.mL.PA.21vsDMSO..6h
• X0.2ug.mL.PA824.DMSO..6h..1
• X0.2ug.mL.PA824.DMSO..6h..2
• X0.4ug.mL.PA824.DMSO..6h..2
• X0.4ug.mL.PA824.DMSO..6h..3
• X0.4ug.mL.PA824.DMSO..6h..4
• X2ug.mL.PA824.DMSO..6h..1
• X2ug.mL.PA824.DMSO..6h..2
• X5ug.mL.AmivsEtOH..6h
• X50ug.mLAntimycinAvsDMSO..6h
• X50ug.mLAntimycinAvsDMSO..6hA
• X50ug.mLAntimycinAvsDMSO..6hB
• X5ug.mL.CapvsEtOH..6h
• X5ug.mL.CapvsEtOH..6hA
• X250uM.DeferroxaminevsDMSO..6h
• X5ug.mL.KCN.DMSO..6h..2
• X0.1ug.mL.RifpvsEtOH..6h
• X0.5ug.mLRifapentinevsEtOH.6h
• X0.5ug.mLRifapentinevsEtOH.6hA
• X10ug.mL.RoxvsEtOH..6hA
• X2ug.mL.SMvsEtOH..6h
• X2ug.mL.SMvsEtOH..6hA
• X10ug.mL.TetvsEtOH..6h
• X10ug.mL.TetvsEtOH..6hA
• H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep2
• X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.y
• X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.y
• X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1
• X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.1
• X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.x
• X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3
• X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4
• X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.x
• X2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
• Tet_100uM_30M_01
• Tet_50ng_30M_01
• Tet_5ug_30M_01
• X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.y
• X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.y
• X10ug.ml.capreomycin.vs.Ethanol..6hrs
• MTB.at.T180..biological.rep1
• MTB.at.T180..biological.rep2
• MTB.at.T180..biological.rep3
• MTB.at.T180..biological.rep4
• MTB.at.T360..biological.rep1