Bicluster


( ! ) Warning: file_get_contents(https://mtb-egrin2.systemsbiology.net/api/api/v1.0.0/bicluster_genes/552fd9aeb744335b89d92e12): failed to open stream: HTTP request failed! HTTP/1.1 500 Internal Server Error in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 15
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18917193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19397197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30607718072get_template_part( ).../page.php:28
60.30607718648locate_template( ).../general-template.php:206
70.30607718776load_template( ).../template.php:720
80.30607719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30737736264the_content( ).../content-page.php:22
100.30767736512apply_filters( ).../post-template.php:256
110.30767736912WP_Hook->apply_filters( ).../plugin.php:205
120.30927742440do_shortcode( ).../class-wp-hook.php:310
130.30937748496preg_replace_callback ( ).../shortcodes.php:273
141.65227757416do_shortcode_tag( ).../shortcodes.php:273
151.65237757888bicluster_genes_shortcode( ).../shortcodes.php:433
161.65237758392file_get_contents ( ).../short_codes.php:15
( ! ) Notice: Trying to get property 'genes' of non-object in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 16
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18917193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19397197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30607718072get_template_part( ).../page.php:28
60.30607718648locate_template( ).../general-template.php:206
70.30607718776load_template( ).../template.php:720
80.30607719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30737736264the_content( ).../content-page.php:22
100.30767736512apply_filters( ).../post-template.php:256
110.30767736912WP_Hook->apply_filters( ).../plugin.php:205
120.30927742440do_shortcode( ).../class-wp-hook.php:310
130.30937748496preg_replace_callback ( ).../shortcodes.php:273
141.65227757416do_shortcode_tag( ).../shortcodes.php:273
151.65237757888bicluster_genes_shortcode( ).../shortcodes.php:433
( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 18
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18917193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19397197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30607718072get_template_part( ).../page.php:28
60.30607718648locate_template( ).../general-template.php:206
70.30607718776load_template( ).../template.php:720
80.30607719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30737736264the_content( ).../content-page.php:22
100.30767736512apply_filters( ).../post-template.php:256
110.30767736912WP_Hook->apply_filters( ).../plugin.php:205
120.30927742440do_shortcode( ).../class-wp-hook.php:310
130.30937748496preg_replace_callback ( ).../shortcodes.php:273
141.65227757416do_shortcode_tag( ).../shortcodes.php:273
151.65237757888bicluster_genes_shortcode( ).../shortcodes.php:433
( ! ) Warning: Invalid argument supplied for foreach() in /local/apache-stuff/mtb_egrin2/wp-content/plugins/wp-biclusters/short_codes.php on line 29
Call Stack
#TimeMemoryFunctionLocation
10.0000398656{main}( ).../index.php:0
20.0001398936require( '/local/apache-stuff/mtb_egrin2/wp-blog-header.php' ).../index.php:17
30.18917193568require_once( '/local/apache-stuff/mtb_egrin2/wp-includes/template-loader.php' ).../wp-blog-header.php:19
40.19397197312include( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/page.php' ).../template-loader.php:106
50.30607718072get_template_part( ).../page.php:28
60.30607718648locate_template( ).../general-template.php:206
70.30607718776load_template( ).../template.php:720
80.30607719088require( '/local/apache-stuff/mtb_egrin2/wp-content/themes/twentyseventeen/template-parts/page/content-page.php' ).../template.php:787
90.30737736264the_content( ).../content-page.php:22
100.30767736512apply_filters( ).../post-template.php:256
110.30767736912WP_Hook->apply_filters( ).../plugin.php:205
120.30927742440do_shortcode( ).../class-wp-hook.php:310
130.30937748496preg_replace_callback ( ).../shortcodes.php:273
141.65227757416do_shortcode_tag( ).../shortcodes.php:273
151.65237757888bicluster_genes_shortcode( ).../shortcodes.php:433
ID: 552fd9aeb744335b89d92e12
# Conditions: 112
# Genes: 22
Residual: 0.41720106069208

Bicluster Motifs

Bicluster Genes

    Bicluster Conditions

    • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3
    • X1ug.mL..59vsDMSO..6h
    • X1ug.mL..59vsDMSO..6hA
    • X10ug.mL..59.DMSO..6h
    • X10ug.mL..59vsDMSO..6h
    • X10ug.mL..59vsDMSO..6hA
    • X1ug.mL..109vsDMSO..6h
    • X1ug.mL..109vsDMSO..6hA
    • X10ug.mL..109.DMSO..6h
    • X10ug.mL..109vsDMSO..6h
    • X10ug.mL..109vsDMSO..6hA
    • X.109..1ug.mL..vs.DMSO..12h..replicate.1..GEO.ac.GSM28051.
    • X.109..10ug.mL..vs.DMSO..12h..replicate.1..GEO.acc..GSM28053.
    • X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054.
    • X1ug.mL..241vsDMSO..6h
    • X1ug.mL..241vsDMSO..6hA
    • X10ug.mL..241vsDMSO..6h
    • X.241..10ug.mL..DMSO..12h..1
    • X.241..10ug.mL..DMSO..12h..2
    • X20ug.mL.Procept.6776vsDMSO..6h
    • X20ug.mL.Prcp.6778.DMSO..6h..2
    • X20ug.mLProcept6778vsDMSO.6hA
    • X40ug.mLProcept6778vsDMSO.6h
    • X10ug.mL.PA.1vsDMSO..6h
    • X10ug.mL.PA.1vsDMSO..6hA
    • X50ug.mL.PA.1vsDMSO..6h
    • X0.2ug.mL.PA824.DMSO..6h..1
    • X0.2ug.mL.PA824.DMSO..6h..2
    • X0.4ug.mL.PA824.DMSO..6h..2
    • X0.4ug.mL.PA824.DMSO..6h..3
    • X0.4ug.mL.PA824.DMSO..6h..4
    • X0.1mg.mL.TriclosanvsEtOH..6h
    • X0.1mg.mL.TriclosanvsEtOH..6hA
    • X0.15mg.mL.TricvsEtOH..6h
    • X0.15mg.mL.TricvsEtOH..6hA
    • X10ug.mL.TriclosanvsDMSO..6hB
    • X10ug.mL.TriclosanvsDMSO..6hC
    • X50ug.mL.Triclosan.EtOH
    • X50ug.mL.TriclosanvsEtOH..6h
    • X100ug.mL.TriclosanvsEtOH..6h
    • X100ug.mL.TriclosanvsEtOH..6hA
    • X10ug.mL.EMBvsDMSO..6hA
    • EMB..10ug.mL..DMSO..12h
    • EMB.10ug.mL.vs.DMSO.12h.3
    • EMB.10ug.mL.vs.DMSO.12h.4
    • X20ug.mL.ethambutol.DMSO
    • X0.2mg.mL.AmpvsEtOH..6h
    • X0.2mg.mL.AmpvsEtOH..6hA
    • X0.2mg.mL.AmpvsEtOH..6hB
    • X0.2mg.mL.AmpvsEtOH..6hC
    • X25ug.mL.AntimycinvsDMSO..6h
    • X50ug.mLAntimycinAvsDMSO..6h
    • X50ug.mLAntimycinAvsDMSO..6hA
    • X0.5ug.mL.CervsEtOH..6h
    • X0.5ug.mL.CervsEtOH..6hA
    • X0.5ug.mL.CeruleninvsDMSO..6hB
    • X20ug.mL.Cephalexin.Ctrl..6h..1
    • X20ug.mL.Cephalexin.Ctrl..6h..2
    • X100ug.mLCephalexinvsEtOH.6h
    • X100ug.mLCephalexinvsEtOH.6hA
    • X1mM.DTNBvsDMSO..6h
    • X2mM.DTNBvsDMSO
    • X12ug.mLEthionamidevsEtOH.6h
    • X12ug.mLEthionamidevsEtOH.6hA
    • X0.2ug.mL.INH.EtOH..6h
    • X10ug.mLMethoxatinvsDMSO.6h
    • X2mMb.mercaptoethanolvsDMSO.6h
    • X0.13mg.mL.TLMvsDMSO..6h
    • X0.13mg.mL.TLMvsDMSO..6hA
    • X0.2mg.mL.TLMvsEtOH..6h
    • X0.2mg.mL.TLMvsEtOH..6hA
    • X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1
    • X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.x
    • X2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
    • X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.1
    • X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.2
    • X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1
    • X130ug.ml.TLM.vs.DMSO.6hrs.rep.1
    • X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.1
    • X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.2
    • X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.3
    • MTB1254.3524.2._INH_20MIN
    • X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.y
    • X0.2mg.ml.Ampicillin.vs.Ethanol.6hrs
    • X10ug.ml.Ethambutol.vs.DMSO.12hrs.3
    • X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.3.y
    • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
    • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
    • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.1
    • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.2
    • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.3
    • H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
    • H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
    • H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.1
    • H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.2
    • H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.2
    • MTB.at.T0..biological.rep1
    • MTB.at.T0..biological.rep3
    • MTB.at.T0..biological.rep4
    • MTB.at.T30..biological.rep1
    • MTB.at.T30..biological.rep2
    • MTB.at.T30..biological.rep3
    • MTB.at.T60..biological.rep1
    • MTB.at.T60..biological.rep2
    • MTB.at.T180..biological.rep1
    • MTB.at.T180..biological.rep2
    • MTB.at.T180..biological.rep3
    • MTB.at.T180..biological.rep4
    • MTB.at.T360..biological.rep1
    • MTB.at.T360..biological.rep2
    • MTB.at.T360..biological.rep3
    • MTB.at.T360..biological.rep4