ID: 552f6d71b744335b89d6c72a
# Conditions: 338
# Genes: 24
Residual: 0.49487033893098
# Conditions: 338
# Genes: 24
Residual: 0.49487033893098
Bicluster Motifs
Bicluster Genes
- Rv0127
- Rv0445c
- Rv0460
- Rv0461
- Rv0463
- Rv1021
- Rv1226c
- Rv1423
- Rv1667c
- Rv2065
- Rv2071c
- Rv2117
- Rv2191
- Rv2209
- Rv2313c
- Rv2315c
- Rv2319c
- Rv2738c
- Rv2772c
- Rv2886c
- Rv3631
- Rv3753c
- Rv3771c
- Rv3772
Bicluster Conditions
- H37Rv.0.05..SDS.exposure.for.1h.rep.1
- H37Rv.0.05..SDS.exposure.for.1h.rep.2
- H37Rv.0.05..SDS.exposure.for.1h.rep.3
- H37Rv.0.05..SDS.exposure.for.1h.rep.4
- H37Rv.0.05..SDS.exposure.for.1h.rep.5
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.x
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.x
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.3
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.4
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.x
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.x
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3.x
- H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1
- CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.5
- MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2
- H37Rv.vs..H37Rv.SDS.treated.rep.1
- H37Rv.vs..H37Rv.SDS.treated.rep.2
- H37Rv.vs..H37Rv.SDS.treated.rep.4
- H37Rv.hypoxia.2hr.rep.1
- H37Rv.hypoxia.2hr.rep.2
- H37Rv.hypoxia.2hr.rep.3
- H37Rv.hypoxia.2hr.rep.4
- H37Rv.hypoxia.2hr.rep.5
- H37Rv.hypoxia.2hr.rep.6
- NRP.Day6..1
- NRP.Day6..3
- NRP.Day8..1
- NRP.Day8..2
- NRP.Day8..3
- NRP.Day10..1
- NRP.Day10..2
- NRP.Day10..3
- NRP.Day12..1
- NRP.Day12..2
- NRP.Day12..3
- NRP.Day14..1
- NRP.Day14..2
- NRP.Day14..4
- NRP.Day14..5
- NRP.Day14..7
- NRP.Day14..9
- NRP.Day20..1
- NRP.Day20..2
- NRP.Day30..1
- pH4.8vspH6.8..2h.
- pH4.8vspH6.8..2h.A
- pH4.8vspH6.8..4h.
- pH4.8vspH6.8..4h.A
- pH4.8vspH6.8..4h.B
- pH4.8vspH6.8..4h.C
- pH4.8vspH6.8..5h.
- pH4.8vspH6.8..5.5h.
- pH4.8vspH6.8..7h.
- pH4.8vspH6.8..11h.
- pH5.2vspH6.8..2h.
- pH5.2vspH6.8..5.5h.
- pH5.2vspH6.8..10.5h.
- pH5.2vspH6.8..11h.
- pH5.2vspH6.8..16h.
- pH5.6vspH6.8..2h.
- pH5.6vspH6.8..2h.A
- pH5.6vspH6.8..4h.
- pH5.6vspH6.8..4h.B
- pH5.6vspH6.8..5h.
- pH5.6vspH6.8..7h.
- pH5.6vspH6.8..11h.
- pH5.6vspH6.8..16h.
- X0.02mM.GSNOvsDMSO..6h
- X0.1mM.GSNO.DMSO..3.5h
- X0.1mM.GSNO.DMSO..6h
- Succinate.7H9.based.medium..1
- Succinate.7H9.based.medium..2
- H37Rv.hypoxia.4hr.rep.3
- H37Rv.hypoxia.12hr.rep.3
- H37Rv.hypoxia.1.day.rep.10
- H37Rv.hypoxia.4.day.rep.2
- H37Rv.hypoxia.4.day.rep.5
- H37Rv.hypoxia.4.day.rep.7
- H37Rv.hypoxia.7.day.rep.7
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.1
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.2
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.3
- H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.6
- X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.x
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5
- H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4
- H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5
- MTB1254_SDS_90MIN_01
- MTB1254_SDS_90MIN_02
- MTB1254_SDS_90MIN_03
- MTB1254_SDS_90MIN_04
- SDS_3h_01
- SDS_60min_01
- Starvation_1254_12h_01
- Starvation_1254_12h_02
- Starvation_1254_12h_03
- Starvation_1254_12h_04
- Starvation_1254_24h_01
- Starvation_1254_24h_02
- Starvation_1254_24h_03
- Starvation_1254_24h_04
- Starvation_1254_24h_05
- Starvation_1254_24h_06
- Starvation_1254_24h_07
- Starvation_1254_24h_08
- Starvation_1254_3d_01
- Starvation_1254_3d_02
- Starvation_1254_3d_03
- Starvation_1254_3d_04
- Starvation_1254_5d_01
- Starvation_1254_5d_02
- Starvation_1254_5d_03
- Starvation_1254_5d_04
- Starvation_1254_6h_01
- Starvation_1254_6h_02
- Starvation_1254_6h_03
- Starvation_1254_6h_04
- Starvation_1254_6h_05
- Starvation_1254_6h_06
- Starvation_1254_6h_07
- Starvation_1254_6h_08
- Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
- Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
- Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
- H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
- CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
- Mtb.response.to.pH.6.5..6.replicates.
- BCG.24hr.phagosomal.profile
- MTB.in.Wild.type.macrophages.for.24hrs
- MTB.in.Wild.type.macrophages.for.48hrs
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.y
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2.y
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.y
- MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.y
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.y
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.y
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.y
- MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7.y
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.y
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.y
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.y
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.5
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.6
- MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.7
- MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1.y
- MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4.y
- MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.3.y
- MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1.y
- MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.3
- Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
- SG7.BT0_N11A02cy.5
- SG8.C.Day.0.pre_N27A07cy.3
- SG2.B2_N02A11c3
- SG2.B3_N02A12c3
- SG8.B.Day.5_N37A08cy.5
- SG6D.T7_N11A02cy.3
- SG6_B7_N7A12cy.5
- SG7.T7B_N11A09cy.5
- SG7.T7C_N11A10cy.5
- SG7.T7D_N11A11cy.5
- SG8.B.Day.7_N37A09cy.5
- SG.ISB.3.7B_N30A03cy.3
- SG.ISB.3.7C_N30A03cy.5
- SG12.A1_N32A02cy.3
- SG12.B1_N32A10cy.3
- SG12.C1_N32A06cy.5
- SG12.A2_N32A03cy.3
- SG12.B8_N32A02cy.5
- SG12.C24_N32A11cy.5
- SG12.B24_N32A03cy.5
- SG12.A24_N32A07cy.3
- SG2.B8_N02A11c5
- SG6.D8_N5A09cy.5
- SG6.C8_N5A08cy.5
- SG6.A8_N5A06cy.5
- SG7.T8C_N11A07cy.3
- SG6.D11_N8A09cy.5
- SG6.B11_N5A11cy.5
- SG12.A120_N32A08cy.3
- SG.ISB.3.12A_N30A06cy.5
- SG.ISB.3.12B_N30A07cy.3
- SG.ISB.3.12D_N30A08cy.3
- SG6.A14_N8A10cy.5
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.1
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.2
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.3
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.4
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.1
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.2
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.3
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.4
- MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.1
- MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.2
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.1
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.2
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.3
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.4
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.2
- MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.4
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4
- MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.1
- MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.4
- MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.1
- MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.2
- MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.3
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.1
- MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.1
- MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.3
- MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.4
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.1
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.3
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.1
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.3
- MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.2
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.2
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.1
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.4
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.2
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.3
- MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.4
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.1
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.2
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3
- MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.3
- MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.4
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.1
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.3
- MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.4
- MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.3
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.1
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.2
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.4
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.1
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.2
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.3
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.4
- MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.5
- X20ug.mL.Procept.6776vsDMSO..6h
- X20ug.mL.Procept6776vsDMSO..6h
- X30ug.mLProcept6776vsDMSO.6h
- X30ug.mLProcept6776vsDMSO.6hA
- X5ug.mLProcept.6778vsDMSO.6h
- X5ug.mLProcept.6778vsDMSO.6hA
- X20ug.mL.Prcp.6778.DMSO..6h..1
- X20ug.mL.Prcp.6778.DMSO..6h..2
- X20ug.mLProcept6778vsDMSO.6h
- X20ug.mLProcept6778vsDMSO.6hA
- X20ug.mLProcept6778vsDMSO.6hB
- X40ug.mLProcept6778vsDMSO.6h
- X10ug.mL.PA.1vsDMSO..6hB
- X50ug.mL.PA.1vsDMSO..6h
- X50ug.mL.PA.21vsDMSO..6h
- X50ug.mL.PA.21vsDMSO..6hA
- X0.4ug.mL.PA824.DMSO..6h..1
- X0.4ug.mL.PA824.DMSO..6h..3
- X0.4ug.mL.PA824.DMSO..6h..4
- X2ug.mL.PA824.DMSO..6h..1
- X2ug.mL.PA824.DMSO..6h..2
- X10ug.mL.Amikacin.EtOH..6h
- X50ug.mLAntimycinAvsDMSO..6h
- X50ug.mLAntimycinAvsDMSO..6hA
- X5ug.mL.CapvsEtOH..6h
- X2mM.DTNBvsDMSO
- X10ug.mL.methoxatinvsDMSO..6h.A
- X10ug.mLMethoxatinvsDMSO.6h
- X20ug.mL.methoxatinvsDMSO..6h
- X10ug.mL.RoxvsEtOH..6h
- X10ug.mL.RoxvsEtOH..6hA
- X30ug.mL.RoxvsEtOH..6h
- X30ug.mL.RoxvsEtOH..6hA
- X50ug.mL.RoxvsEtOH..6h
- X50ug.mL.RoxvsEtOH..6hA
- X2ug.mL.SMvsEtOH..6hA
- X10ug.mL.TetvsEtOH..6h
- X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.y
- X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1
- X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.1
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.x
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3
- X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4
- X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.x
- X2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
- Tet_5ug_30M_01
- X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.y
- X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A
- X10ug.ml.capreomycin.vs.Ethanol..6hrs
- X5ug.ml.Streptomycin.vs.Ethanol.6hrs
- MTB.at.T0..biological.rep1
- MTB.at.T0..biological.rep2
- MTB.at.T0..biological.rep3
- MTB.at.T0..biological.rep4
- MTB.at.T30..biological.rep3
- MTB.at.T60..biological.rep2
- MTB.at.T180..biological.rep3
- MTB.at.T360..biological.rep1
- MTB.at.T360..biological.rep2
- MTB.at.T360..biological.rep3
- MTB.at.T360..biological.rep4