Bicluster

ID: 552fc823b744335b89d8c4d5
# Conditions: 259
# Genes: 23
Residual: 0.48231455528071

Bicluster Motifs

Bicluster Genes

  • Rv1065
  • Rv1066
  • Rv1557
  • Rv1785c
  • Rv1787
  • Rv1790
  • Rv1885c
  • Rv2173
  • Rv2174
  • Rv2509
  • Rv2565
  • Rv2726c
  • Rv2869c
  • Rv2968c
  • Rv2969c
  • Rv3311
  • Rv3358
  • Rv3707c
  • Rv3767c
  • Rv3883c
  • Rv3887c
  • Rv3888c
  • Rv3905c

Bicluster Conditions

  • High.iron.wt.vs.low.iron.wt.1a
  • High.iron.wt.vs.low.iron.wt.2a
  • High.iron.wt.vs.low.iron.wt.2b
  • High.iron.wt.vs.low.iron.wt.3a
  • Whole.Lung.Surfactant.2hrs.rep.1
  • Whole.Lung.Surfactant.2hrs.rep.2
  • Whole.Lung.Surfactant.2hrs.rep.3
  • Whole.Lung.Surfactant.30min.rep.2
  • Whole.Lung.Surfactant.30min.rep.3
  • Whole.Lung.Surfactant.30min.rep.4
  • Whole.Lung.Surfactant.30min.rep.5
  • Extracted.Lung.Surfactant.2hrs.rep.1
  • Extracted.Lung.Surfactant.30min.rep.1
  • Extracted.Lung.Surfactant.30min.rep.3
  • Extracted.Lung.Surfactant.30min.rep.4
  • Purified.Surfactant.Lipids.2hrs.rep.2
  • Purified.Surfactant.Lipids.30min.rep.2
  • Purified.Human.SP.A.Coated.2hrs.rep1
  • Purified.Human.SP.A.Uncoated.2hrs.rep1
  • Purified.Human.SP.A.Uncoated.2hrs.rep2
  • Purified.Human.SP.A.Uncoated.2hrs.rep4
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6
  • AA_10uM_10min_01
  • AA_30uM_10.min_04
  • AA_30uM_10min_02
  • AA_30uM_1h_01
  • AA_30uM_1h_03
  • AA_30uM_1h_04
  • AA_30uM_1h_05
  • AA_30uM_1h_06
  • AA_30uM_1h_07
  • AA_30uM_1h_08
  • AA_30uM_24h_02
  • AA_30uM_2h_04
  • AA_30uM_30min_03
  • AA_30uM_30min_09
  • AA_30uM_4h_06
  • AA_3uM_10min_02
  • AA_60uM_24h_01
  • L2A_30uM_10min_04
  • L2A_30uM_10min_05
  • L2A_30uM_1h_01
  • L2A_30uM_1h_04
  • L2A_30uM_1h_05
  • L2A_30uM_1h_06
  • L2A_30uM_1h_07
  • L2A_30uM_1h_08
  • L2A_30uM_1h_09
  • L2A_30uM_2h_03
  • L2A_30uM_30min_03
  • L2A_30uM_30min_04
  • L2A_30uM_30min_05
  • L2A_30uM_30Min_06
  • L2A_30uM_30min_07
  • L2A_30uM_4h_04
  • LAA_50uM_10min_01
  • LAA_50uM_10min_02
  • OA_50uM_10min_01
  • OA_50uM_10min_02
  • OA_50uM_10min_07
  • OA_50uM_1h_02
  • OA_50uM_1h_04
  • OA_50uM_1h_06
  • OA_50uM_1h_09
  • OA_50uM_2h_05
  • OA_50uM_30min_03
  • OA_50uM_30min_05
  • OA_50uM_4h_02
  • OA_50uM_4h_04
  • OA_50uM_4h_05
  • OA_50uM_4h_07
  • OA_50uM_4h_08
  • OA_50uM_4h_09
  • PA_100uM_2h_04
  • PA_10uM_10.min_01
  • PA_10uM_10min_02
  • PA_5.uM_10min_02
  • PA_50uM_10.min_02
  • PA_50uM_10.min_03
  • PA_50uM_10min_01
  • PA_50uM_10min_04
  • PA_50uM_12h_01
  • PA_50uM_12h_02
  • PA_50uM_12h_04
  • PA_50uM_1h_02
  • PA_50uM_1h_03
  • PA_50uM_1h_04
  • PA_50uM_1h_05
  • PA_50uM_1h_06
  • PA_50uM_1h_08
  • PA_50uM_1h_09
  • PA_50uM_1h_12
  • PA_50uM_24h_01
  • PA_50uM_24h_02
  • PA_50uM_24h_07
  • PA_50uM_24h_08
  • PA_50uM_2h_01
  • PA_50uM_2h_03
  • PA_50uM_2h_04
  • PA_50uM_2h_07
  • PA_50uM_2h_08
  • PA_50uM_30.min_04
  • PA_50uM_30.min_05
  • PA_50uM_30.min_06
  • PA_50uM_30.min_07
  • PA_50uM_3d_01
  • PA_50uM_3d_03
  • PA_50uM_3d_04
  • PA_50uM_3d_06
  • PA_50uM_4h
  • PA_50uM_4h_04
  • PA_50uM_4h_06
  • PA_50uM_8h_03
  • PA_5uM_10.min_01
  • H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.1
  • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.2
  • H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3
  • Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1
  • CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
  • CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
  • BCG.2hr.phagosomal.profile
  • BCG.24hr.phagosomal.profile
  • M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
  • M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
  • MTB.in.Wild.type.macrophages.for.24hrs
  • MTB.in.Wild.type.macrophages.for.48hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.48hrs
  • Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
  • Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
  • X1ug.mL..59vsDMSO..6h
  • X1ug.mL..59vsDMSO..6hA
  • X10ug.mL..59.DMSO..6h
  • X10ug.mL..59vsDMSO..6h
  • X10ug.mL..59vsDMSO..6hA
  • X1ug.mL..109vsDMSO..6h
  • X10ug.mL..109.DMSO..6h
  • X10ug.mL..109vsDMSO..6h
  • X10ug.mL..109vsDMSO..6hA
  • X.109..1ug.mL..vs.DMSO..12h..replicate.1..GEO.ac.GSM28051.
  • X.109..1ug.mL..vs.DMSO..12h..replicate.2..GEO.acc.GSM28052.
  • X.109..10ug.mL..vs.DMSO..12h..replicate.1..GEO.acc..GSM28053.
  • X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054.
  • X1ug.mL..241vsDMSO..6h
  • X10ug.mL..241vsDMSO..6h
  • X.241..10ug.mL..DMSO..12h..1
  • X.241..10ug.mL..DMSO..12h..2
  • X40ug.mL.5CL.pH5.6..2h..1
  • X40ug.mL.5CL.pH5.6..2h..2
  • X40ug.mL.5CL.pH5.6..4h..1
  • X40ug.mL.5CL.pH5.6..4h..2
  • X40ug.mL.5CL.pH5.6..4h..3
  • X80ug.mL.5CL.pH5.6..2h.
  • X0.12mg.mL.BZA.pH5.6..2h.
  • X0.12mg.mL.BZA.pH5.6..4h..1
  • X0.12mg.mL.BZA.pH5.6..4h..2
  • X0.12mg.mL.BZAvspH5.6..5h.
  • X0.12mg.mL.BZAvspH5.6..7h.
  • X0.12mg.mL.BZAvspH5.6..11h.
  • X0.12mg.mL.Nam.pH5.6..2h..1
  • X0.12mg.mL.Nam.pH5.6..2h..2
  • X0.12mg.mL.Nam.pH5.6..4h..1
  • X0.12mg.mL.Nam.pH5.6..4h..2
  • X0.12mg.mL.NamvspH5.6..4h.
  • X0.12mg.mL.NamvspH5.6..7h.
  • X1.2mg.mL.NamvspH5.6..5h.
  • X1.2mg.mL.NamvspH5.6..10.5h.
  • X0.12mg.mL.PZA.pH5.6..2h.
  • X0.12mg.mL.PZA.pH5.6..4h..1
  • X0.12mg.mL.PZA.pH5.6..4h..2
  • X0.12mg.mL.PZAvspH5.6..4h.
  • X0.12mg.mL.PZAvspH5.6..4h.A
  • X0.12mg.mL.PZA.pH5.6..5h.
  • X0.12mg.mL.PZAvspH5.6..5.5h.
  • X0.12mg.mL.PZAvspH5.6..6h.
  • X0.12mg.mL.PZAvspH5.6..6h.A
  • X0.12mg.mL.PZAvspH5.6..10.5h.
  • X0.12mg.mL.PZAvspH5.6..11h.
  • X1.2mg.mL.PZA.pH5.6..2h..
  • X1.2mg.mL.PZAvspH5.6..4h.
  • X1.2mg.mL.PZAvspH5.6..4h.A
  • X1.2mg.mL.PZAvspH5.6..4h.B
  • X1.2mg.mL.PZA.pH5.6..5h.
  • X1.2mg.mL.PZAvspH5.6..6h.
  • X1.2mg.mL.PZAvspH5.6..6h.A
  • X1.2mg.mL.PZAvspH5.6..7h.
  • X1.2mg.mL.PZAvspH5.6..7h.A
  • X1.2mg.mL.PZAvspH5.6..10.5h.
  • X1.2mg.mL.PZAvspH5.6..16h.
  • DIPED.5ug.mL.vs.DMSO.12h.2
  • DIPED..100ug.mL..DMSO..12h..3
  • X0.1mg.mL.TriclosanvsEtOH..6h
  • X10ug.mL.TriclosanvsDMSO..6h
  • X10ug.mL.TriclosanvsDMSO..6hA
  • X100ug.mL.TriclosanvsEtOH..6hA
  • X10ug.mL.EMBvsDMSO..6h
  • X10ug.mL.EMBvsDMSO..6hA
  • EMB.10ug.mL.vs.DMSO.12h.2
  • EMB.10ug.mL.vs.DMSO.12h.3
  • X20ug.mL.ethambutol.DMSO
  • X0.5ug.mL.CervsEtOH..6hA
  • X0.5ug.mL.CeruleninvsDMSO..6hC
  • X20ug.mL.Cephalexin.Ctrl..6h..2
  • X100ug.mL.Ceph.DMSO..6h
  • X100ug.mL.Cphx.DMSO..6h
  • X100ug.mLCephalexinvsEtOH.6h
  • X100ug.mLCephalexinvsEtOH.6hA
  • X40ug.mL.EtavsEtOH..6h
  • X0.4ug.mL.INHvsEtOH..6hA
  • X130ug.mL.TLMvsDMSO..6hA
  • X0.2mg.mL.TLMvsEtOH..6h
  • X0.2mg.mL.TLMvsEtOH..6hA
  • X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.2
  • X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.3.x
  • X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.x
  • X130ug.ml.TLM.vs.DMSO.6hrs.rep.2
  • X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.1
  • X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.3
  • X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2
  • MTB1254.3524.2._INH_20MIN
  • X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1.y
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.1
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.2
  • H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.3
  • H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2
  • H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1
  • H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3
  • H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.1
  • H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.2
  • H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.2
  • H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.2
  • H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.1
  • H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.2