Bicluster

ID: 552f053eb744335b89d43d48
# Conditions: 289
# Genes: 9
Residual: 0.57554610461484

Bicluster Motifs

Bicluster Genes

  • Rv0076c
  • Rv0334
  • Rv2287
  • Rv2531c
  • Rv2754c
  • Rv2937
  • Rv3455c
  • Rv3638
  • Rv3825c

Bicluster Conditions

  • H37Rv.0.05..SDS.exposure.for.1h.rep.1
  • H37Rv.0.05..SDS.exposure.for.1h.rep.3
  • H37Rv.0.05..SDS.exposure.for.1h.rep.4
  • H37Rv.0.05..SDS.exposure.for.1h.rep.5
  • H37Rv.0.05..SDS.exposure.for.1h.rep.6
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.x
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.x
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.x
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1.x
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3.x
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.x
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4.x
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.2
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2.x
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3.x
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1.x
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2.x
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.3.x
  • H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4
  • CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.2
  • CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.4
  • H37Rv.vs..H37Rv.SDS.treated.rep.5
  • H37Rv.vs..H37Rv.SDS.treated.rep.6
  • High.iron.wt.vs.low.iron.wt.1a
  • High.iron.wt.vs.low.iron.wt.1b
  • High.iron.wt.vs.low.iron.wt.2a
  • High.iron.wt.vs.low.iron.wt.3a
  • pH4.8vspH6.8..2h.A
  • pH4.8vspH6.8..4h.A
  • pH4.8vspH6.8..5h.
  • pH4.8vspH6.8..5.5h.
  • pH4.8vspH6.8..11h.
  • pH5.2vspH6.8..2h.
  • pH5.2vspH6.8..5h.
  • pH5.2vspH6.8..5.5h.
  • pH5.2vspH6.8..10.5h.
  • pH5.2vspH6.8..11h.
  • pH5.6vspH6.8..2h.A
  • pH5.6vspH6.8..4h.B
  • pH5.6vspH6.8..5h.
  • pH5.6vspH6.8..11h.
  • pH5.6vspH6.8..16h.
  • X0.02mM.GSNOvsDMSO..6h
  • X0.1mM.GSNO.DMSO..3.5h
  • X0.1mM.GSNOvsDMSO..4h
  • X0.1mM.GSNO.DMSO..6h
  • X0.1mM.GSNOvsDMSO..6h.A
  • X4mM.H2O2vsctrl..2h.
  • X4mM.H2O2.ctrl..4h...2
  • X4mM.H2O2vsctrl..4h.A
  • H37Rv.diamide.1h.rep.3
  • H37Rv.diamide.1h.rep.6
  • H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.6
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3
  • H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5
  • X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.x
  • X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.x
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3
  • H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1
  • H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3
  • CHP_25uM_24h_01
  • SDS_60min_01
  • Starvation_1254_12h_01
  • Starvation_1254_12h_02
  • Starvation_1254_12h_03
  • Starvation_1254_12h_04
  • Starvation_1254_24h_01
  • Starvation_1254_24h_02
  • Starvation_1254_24h_03
  • Starvation_1254_24h_04
  • Starvation_1254_24h_05
  • Starvation_1254_24h_06
  • Starvation_1254_24h_07
  • Starvation_1254_24h_08
  • Starvation_1254_3d_01
  • Starvation_1254_3d_02
  • Starvation_1254_5d_01
  • Starvation_1254_5d_02
  • Starvation_1254_5d_03
  • Starvation_1254_5d_04
  • Starvation_1254_6h_01
  • Starvation_1254_6h_02
  • Starvation_1254_6h_03
  • Starvation_1254_6h_04
  • Starvation_1254_6h_05
  • Starvation_1254_6h_06
  • Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1
  • Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2
  • H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2
  • CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1
  • CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2
  • Mtb.response.to.pH.5.5..6.replicates.
  • Mtb.response.to.pH.6.5..6.replicates.
  • BCG.2hr.phagosomal.profile
  • BCG.24hr.phagosomal.profile
  • M..tuberculosis.CDC1551.2hr.phagosome.expression.profile
  • M..tuberculosis.CDC1551.24hr.phagosome.expression.profile
  • MTB.in.Wild.type.macrophages.for.24hrs
  • MTB.in.Wild.type.macrophages.for.48hrs
  • MTB.in.Wild.type.macrophages...IFNg.for.48hrs
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1.y
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3.y
  • MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4.y
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5.y
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6.y
  • MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7.y
  • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.1
  • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.3
  • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1.y
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.3
  • MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.4hrs.rep.4
  • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.1
  • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.3
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2.y
  • MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3.y
  • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.1
  • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.3
  • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.5
  • MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2.y
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.1
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.2
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.6
  • MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.2
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.1
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.4
  • MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.6
  • MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.1
  • MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.2
  • MTB.strain1254.vs.MTB.strain.1254.for.DETA.NO.exp.control.rep.3
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.1
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.2
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.3
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.5
  • MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.6
  • Russell_Lab_Spotted_Oligos_1.1..14.day.resting.macrophage.infection.2hr..rep.1..Russell_Lab_Spotted_Oligos_1.1..
  • Russell_Lab_Spotted_Oligos_1.6..14.day.resting.macrophage.infection.Day.4..rep.2..Russell_Lab_Spotted_Oligos_1.6..
  • Russell_Lab_Spotted_Oligos_1.8..14.day.resting.macrophage.infection.Day.6..rep.2..Russell_Lab_Spotted_Oligos_1.8..
  • Russell_Lab_Spotted_Oligos_1.14.14.day.resting.macrophage.infection.Day.12..rep.2..Russell_Lab_Spotted_Oligos_1.14.
  • Russell_Lab_Spotted_Oligos_1.16.14.day.resting.macrophage.infection.Day.14..rep.2..Russell_Lab_Spotted_Oligos_1.16.
  • WT_140mM_NaCl_Rep2
  • WT_140mM_NaCl_Rep3
  • A00470_Q2_t60_diamide
  • A00470_Q3_t90_diamide
  • A00437_Q1_t30_diamide
  • A00437_Q2_t60_diamide
  • A00437_Q3_t90_diamide
  • A00436_Q1_t30_diamide
  • A00436_Q2_t60_diamide
  • A00436_Q3_t90_diamide
  • MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.3
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.2
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.2
  • MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3
  • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.1
  • MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.2
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.3
  • MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.4
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.3
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.4
  • MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.1
  • MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.2
  • MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.3
  • MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.1
  • MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.3
  • MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.4
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.1
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.3
  • MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4
  • MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.3
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.1
  • MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.1
  • MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.3
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.1
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.2
  • MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.4
  • X20ug.mL.Procept6776vsDMSO..6h
  • X30ug.mLProcept6776vsDMSO.6h
  • X30ug.mLProcept6776vsDMSO.6hA
  • X5ug.mLProcept.6778vsDMSO.6h
  • X5ug.mLProcept.6778vsDMSO.6hA
  • X20ug.mL.Prcp.6778.DMSO..6h..2
  • X20ug.mLProcept6778vsDMSO.6h
  • X20ug.mLProcept6778vsDMSO.6hB
  • X10ug.mL.PA.1vsDMSO..6h
  • X10ug.mL.PA.1vsDMSO..6hB
  • X50ug.mL.PA.1vsDMSO..6h
  • X10ug.mL.PA.21vsDMSO..6h
  • X10ug.mL.PA.21vsDMSO..6hA
  • X0.2ug.mL.PA824.DMSO..6h..1
  • X0.2ug.mL.PA824.DMSO..6h..2
  • X0.4ug.mL.PA824.DMSO..6h..2
  • X2ug.mL.PA824.DMSO..6h..2
  • X5ug.mL.AmivsEtOH..6h
  • X5ug.mL.AmivsEtOH..6hA
  • X10ug.mL.Amikacin.EtOH..6h
  • X50ug.mLAntimycinAvsDMSO..6h
  • X50ug.mLAntimycinAvsDMSO..6hB
  • X10ug.mL.CapvsEtOH..6h
  • X10ug.mL.capreomycinvsEtOH..6h
  • X1mM.DTNBvsDMSO..6h
  • X2mM.DTNBvsDMSO
  • X5ug.mL.KCN.DMSO..6h..2
  • X10ug.mL.methoxatinvsDMSO..6h.A
  • X10ug.mLMethoxatinvsDMSO.6h
  • X2mMb.mercaptoethanolvsDMSO.6h
  • X0.2ug.mL.RifvsDMSO..6hA
  • Rif.5ug.mL.vsDMSO.2.5h
  • Rif.5ug.mL.vsDMSO.2.5hA
  • X0.1ug.mL.RifpvsEtOH..6h
  • X0.1ug.mL.RifpvsEtOH..6hA
  • X30ug.mL.RoxvsEtOH..6h
  • X50ug.mL.RoxvsEtOH..6h
  • X5ug.mLStreptomycinvsEtOH.6h
  • X10ug.mL.TetvsEtOH..6h
  • X10ug.mL.TetvsEtOH..6hA
  • X5ug.ml.KCN.vs.DMSO.6hrs.rep.1.y
  • X5ug.ml.KCN.vs.DMSO.6hrs.rep.2.y
  • X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1
  • X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.1
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4
  • X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.x
  • Tet_100uM_30M_01
  • Tet_500ng_30M_01
  • Tet_50ng_30M_01
  • Tet_5ug_30M_01
  • X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2.y
  • X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1.y
  • X10ug.ml.capreomycin.vs.Ethanol..6hrs
  • X5ug.ml.Streptomycin.vs.Ethanol.6hrs
  • MTB.at.T0..biological.rep4
  • MTB.at.T60..biological.rep1
  • MTB.at.T360..biological.rep2
  • MTB.at.T360..biological.rep3
  • MTB.at.T360..biological.rep4