Bicluster – MTB EGRIN 2.0

ID: 552f383cb744335b89d59374
# Conditions: 161
# Genes: 37
Residual: 0.53578365266793

Bicluster Motifs

Bicluster Genes

Rv0270
Rv0787
Rv0808
Rv0824c
Rv0876c
Rv0903c
Rv0998
Rv1127c
Rv1128c
Rv1540
Rv1600
Rv1601
Rv1602
Rv1606
Rv1638
Rv1732c
Rv2043c
Rv2315c
Rv2391
Rv2392
Rv2438c
Rv2485c
Rv2495c
Rv2925c
Rv2972c
Rv3371
Rv3408
Rv3409c
Rv3423c
Rv3450c
Rv3550
Rv3582c
Rv3583c
Rv3611
Rv3776
Rv3777
Rv3841

Bicluster Conditions

MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1
MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2
H37Rv.hypoxia.2hr.rep.1
H37Rv.hypoxia.2hr.rep.3
H37Rv.hypoxia.2hr.rep.5
H37Rv.hypoxia.2hr.rep.6
NRP.Day6..2
NRP.Day6..3
NRP.Day8..1
NRP.Day8..2
NRP.Day8..3
NRP.Day10..1
NRP.Day10..2
NRP.Day10..3
NRP.Day12..2
NRP.Day14..4
NRP.Day14..6
NRP.Day14..8
NRP.Day14..9
NRP.Day20..1
X4mM.H2O2vsctrl..2h.
X4mM.H2O2.ctrl..2h...2
X4mM.H2O2.ctrl..4h...1
X4mM.H2O2.ctrl..4h...2
Succinate.7H9.based.medium..2
H37Rv.hypoxia.4hr.rep.1
H37Rv.hypoxia.4hr.rep.2
H37Rv.hypoxia.4hr.rep.5
H37Rv.hypoxia.4hr.rep.6
H37Rv.hypoxia.7.day.rep.1
H37Rv.hypoxia.7.day.rep.2
H37Rv.hypoxia.7.day.rep.3
H37Rv.diamide.1h.rep.1
H37Rv.diamide.1h.rep.2
H37Rv.diamide.1h.rep.3
H37Rv.diamide.1h.rep.4
H37Rv.diamide.1h.rep.5
H37Rv.diamide.1h.rep.6
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6
CHP_25uM_1h_01
Glycerol_1._10M_01
Glycerol_1._30M_01
Starvation_1254_OA50_12h_02
Starvation_1254_OA50_12h_03
Starvation_1254_OA50_12h_04
Starvation_1254_OA50_24h_01
Starvation_1254_OA50_24h_02
Starvation_1254_OA50_24h_03
Starvation_1254_OA50_24h_04
Starvation_1254_OA50_3d_02
Starvation_1254_OA50_5d_02
Starvation_1254_OA50_5d_03
Starvation_1254_OA50_5d_04
Starvation_1254_OA50_6h_02
Starvation_1254_OA50_6h_03
Starvation_1254_OA50_6h_04
Starvation_1254_PA50_6h_01
Starvation_1254_PA50_6h_02
Starvation_OA50_24h_03
Starvation_OA50_24h_04
Starvation_OA50_6h_01
Starvation_OA50_6h_02
Starvation_OA50_6h_04
MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.1
MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.3
MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.3
MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.5
MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.6
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.3
MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.1
MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.2
MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.6
SG2.A0_N02A01c3
SG2.B0_N02A09c3
SG2.D0_N02A01c5
SG6.G0_N5A02cy.5
SG6.H0_N5A03cy.5
SG6_A0_N7A10cy.3
SG6_B0_N7A10cy.5
SG7.AT0_N11A01cy.5
SG7.BT0_N11A02cy.5
SG7.DT0_N11A04cy.5
SG8.C.Day.0.post_N27A08cy.3
SG8.C.Day.0.post_N37A10cy.5
SG8.D.Day.0.post_N27A11cy.3
SG8.D.Day.1_N27A12cy.3
SG8.B.Day.1_N37A05cy.5
SG7.DT1_N11A08cy.5
SG7.CT1_N11A07cy.5
SG7.BT1_N11A06cy.5
SG2.D1_N02A02c5
SG2.B1_N02A10c3
SG2.A1_N02A02c3
SG8.A.Day.2_N37A08cy.3
SG8.C.Day.2_N37A12cy.5
SG8.B.Day.2_N37A06cy.5
SG2.A3_N02A04c3
SG2.D3_N02A04c5
SG8.B.Day.5_N37A08cy.5
SG2.A5_N02A05c3
SG2.B5_N02A09c5
SG2.D5_N02A05c5
SG2.D7_N02A06c5
SG2.B7_N02A10c5
SG2.A7_N02A06c3
SG6D.T7_N11A02cy.3
SG6_B7_N7A12cy.5
SG6_A7_N7A12cy.3
SG7.T7B_N11A09cy.5
SG7.T7C_N11A10cy.5
SG7.T7D_N11A11cy.5
SG.ISB.3.7B_N30A03cy.3
SG.ISB.3.7C_N30A03cy.5
SG.ISB.3.7D_N30A04cy.3
SG12.C0_N32A05cy.5
SG12.B0_N32A09cy.3
SG12.A0_N32A01cy.3
SG12.A1_N32A02cy.3
SG12.B1_N32A10cy.3
SG12.C1_N32A06cy.5
SG12.A2_N32A03cy.3
SG12.B2_N32A11cy.3
SG12.C2_N32A07cy.5
SG12.B4_N32A12cy.3
SG12.C4_N32A08cy.5
SG12.C6_N32A09cy.5
SG12.B8_N32A02cy.5
SG12.B24_N32A03cy.5
SG2.A8_N02A07c3
SG2.B8_N02A11c5
SG2.D8_N02A07c5
SG6.B8_N5A07cy.5
SG6.A8_N5A06cy.5
SG7.T8C_N11A07cy.3
SG.ISB.3.8A_N30A04cy.5
SG.ISB.3.8B_N30A05cy.3
SG.ISB.3.8C_N30A05cy.5
SG2.A9_N02A08c3
SG2.B9_N02A12c5
SG2.D9_N02A08c5
SG6.D11_N8A09cy.5
SG6.A11_N5A10cy.5
SG7.T12D_N11A12cy.3
SG.ISB.3.12B_N30A07cy.3
SG.ISB.3.12D_N30A08cy.3
SG6.A14_N8A10cy.5
SG6.C14_N8A12cy.5
SG6D.T14_N11A04cy.3
A00470_Q2_t60_diamide
A00470_Q3_t90_diamide
A00437_Q2_t60_diamide
A00437_Q3_t90_diamide
A00436_Q1_t30_diamide
A00436_Q2_t60_diamide
A00436_Q3_t90_diamide

Column members cluster 552f383cb744335b89d59374 Species (TODO)

MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1
MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2
H37Rv.hypoxia.2hr.rep.1
H37Rv.hypoxia.2hr.rep.3
H37Rv.hypoxia.2hr.rep.5
H37Rv.hypoxia.2hr.rep.6
NRP.Day6..2
NRP.Day6..3
NRP.Day8..1
NRP.Day8..2
NRP.Day8..3
NRP.Day10..1
NRP.Day10..2
NRP.Day10..3
NRP.Day12..2
NRP.Day14..4
NRP.Day14..6
NRP.Day14..8
NRP.Day14..9
NRP.Day20..1
X4mM.H2O2vsctrl..2h.
X4mM.H2O2.ctrl..2h...2
X4mM.H2O2.ctrl..4h...1
X4mM.H2O2.ctrl..4h...2
Succinate.7H9.based.medium..2
H37Rv.hypoxia.4hr.rep.1
H37Rv.hypoxia.4hr.rep.2
H37Rv.hypoxia.4hr.rep.5
H37Rv.hypoxia.4hr.rep.6
H37Rv.hypoxia.7.day.rep.1
H37Rv.hypoxia.7.day.rep.2
H37Rv.hypoxia.7.day.rep.3
H37Rv.diamide.1h.rep.1
H37Rv.diamide.1h.rep.2
H37Rv.diamide.1h.rep.3
H37Rv.diamide.1h.rep.4
H37Rv.diamide.1h.rep.5
H37Rv.diamide.1h.rep.6
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5
H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6
CHP_25uM_1h_01
Glycerol_1._10M_01
Glycerol_1._30M_01
Starvation_1254_OA50_12h_02
Starvation_1254_OA50_12h_03
Starvation_1254_OA50_12h_04
Starvation_1254_OA50_24h_01
Starvation_1254_OA50_24h_02
Starvation_1254_OA50_24h_03
Starvation_1254_OA50_24h_04
Starvation_1254_OA50_3d_02
Starvation_1254_OA50_5d_02
Starvation_1254_OA50_5d_03
Starvation_1254_OA50_5d_04
Starvation_1254_OA50_6h_02
Starvation_1254_OA50_6h_03
Starvation_1254_OA50_6h_04
Starvation_1254_PA50_6h_01
Starvation_1254_PA50_6h_02
Starvation_OA50_24h_03
Starvation_OA50_24h_04
Starvation_OA50_6h_01
Starvation_OA50_6h_02
Starvation_OA50_6h_04
MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.1
MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.3
MTB.strain.1254.Ctrl.vs.0.05.mM.H202.40min.rep.4
MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.2
MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.3
MTB.strain.1254.Ctrl.vs.0.5.mM.H202.40min.rep.5
MTB.strain.1254.Ctrl.vs.10.0.mM.H202.40min.rep.6
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.40min.rep.3
MTB.strain.1254.Ctrl.vs.5.0.mM.H202.4hr.rep.3
MTB.strain.1254.Ctrl.vs.50.0.mM.H202.40min.rep.1
MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.2
MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.4
MTB.strain1254.vs.MTB.strain.1254.for.H2O2.exp.control.rep.6
SG2.A0_N02A01c3
SG2.B0_N02A09c3
SG2.D0_N02A01c5
SG6.G0_N5A02cy.5
SG6.H0_N5A03cy.5
SG6_A0_N7A10cy.3
SG6_B0_N7A10cy.5
SG7.AT0_N11A01cy.5
SG7.BT0_N11A02cy.5
SG7.DT0_N11A04cy.5
SG8.C.Day.0.post_N27A08cy.3
SG8.C.Day.0.post_N37A10cy.5
SG8.D.Day.0.post_N27A11cy.3
SG8.D.Day.1_N27A12cy.3
SG8.B.Day.1_N37A05cy.5
SG7.DT1_N11A08cy.5
SG7.CT1_N11A07cy.5
SG7.BT1_N11A06cy.5
SG2.D1_N02A02c5
SG2.B1_N02A10c3
SG2.A1_N02A02c3
SG8.A.Day.2_N37A08cy.3
SG8.C.Day.2_N37A12cy.5
SG8.B.Day.2_N37A06cy.5
SG2.A3_N02A04c3
SG2.D3_N02A04c5
SG8.B.Day.5_N37A08cy.5
SG2.A5_N02A05c3
SG2.B5_N02A09c5
SG2.D5_N02A05c5
SG2.D7_N02A06c5
SG2.B7_N02A10c5
SG2.A7_N02A06c3
SG6D.T7_N11A02cy.3
SG6_B7_N7A12cy.5
SG6_A7_N7A12cy.3
SG7.T7B_N11A09cy.5
SG7.T7C_N11A10cy.5
SG7.T7D_N11A11cy.5
SG.ISB.3.7B_N30A03cy.3
SG.ISB.3.7C_N30A03cy.5
SG.ISB.3.7D_N30A04cy.3
SG12.C0_N32A05cy.5
SG12.B0_N32A09cy.3
SG12.A0_N32A01cy.3
SG12.A1_N32A02cy.3
SG12.B1_N32A10cy.3
SG12.C1_N32A06cy.5
SG12.A2_N32A03cy.3
SG12.B2_N32A11cy.3
SG12.C2_N32A07cy.5
SG12.B4_N32A12cy.3
SG12.C4_N32A08cy.5
SG12.C6_N32A09cy.5
SG12.B8_N32A02cy.5
SG12.B24_N32A03cy.5
SG2.A8_N02A07c3
SG2.B8_N02A11c5
SG2.D8_N02A07c5
SG6.B8_N5A07cy.5
SG6.A8_N5A06cy.5
SG7.T8C_N11A07cy.3
SG.ISB.3.8A_N30A04cy.5
SG.ISB.3.8B_N30A05cy.3
SG.ISB.3.8C_N30A05cy.5
SG2.A9_N02A08c3
SG2.B9_N02A12c5
SG2.D9_N02A08c5
SG6.D11_N8A09cy.5
SG6.A11_N5A10cy.5
SG7.T12D_N11A12cy.3
SG.ISB.3.12B_N30A07cy.3
SG.ISB.3.12D_N30A08cy.3
SG6.A14_N8A10cy.5
SG6.C14_N8A12cy.5
SG6D.T14_N11A04cy.3
A00470_Q2_t60_diamide
A00470_Q3_t90_diamide
A00437_Q2_t60_diamide
A00437_Q3_t90_diamide
A00436_Q1_t30_diamide
A00436_Q2_t60_diamide
A00436_Q3_t90_diamide